RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 SMAPO00193 183 aa11.98□□□□□ -0.49
SRRM1-216ENST00000489130 SOCS6O14544 535 aa11.98□□□□□ -0.49
SRRM1-216ENST00000489130 ZBTB14O43829 449 aa11.98□□□□□ -0.49
SRRM1-216ENST00000489130 KLHL41O60662 606 aa11.98□□□□□ -0.49
SRRM1-216ENST00000489130 BANF1O75531 89 aa11.98□□□□□ -0.49
SRRM1-216ENST00000489130 ALPPP05187 535 aa11.98□□□□□ -0.49
SRRM1-216ENST00000489130 EIF2S1P05198 315 aaKnown RBP11.98□□□□□ -0.49
SRRM1-216ENST00000489130 ERVK-10P10266 1014 aa11.98□□□□□ -0.49
SRRM1-216ENST00000489130 EZRP15311 586 aaKnown RBP11.98□□□□□ -0.49
SRRM1-216ENST00000489130 GABRB3P28472 473 aa11.98□□□□□ -0.49
SRRM1-216ENST00000489130 IMPA1P29218 277 aa11.98□□□□□ -0.49
SRRM1-216ENST00000489130 ARF3P61204 181 aaPredicted RBP11.98□□□□□ -0.49
SRRM1-216ENST00000489130 ABATP80404 500 aa11.98□□□□□ -0.49
SRRM1-216ENST00000489130 TIAL1Q01085 375 aaKnown RBP eCLIP11.98□□□□□ -0.49
SRRM1-216ENST00000489130 MUM1Q2TAK8 710 aa11.98□□□□□ -0.49
SRRM1-216ENST00000489130 SLC6A19Q695T7 634 aa11.98□□□□□ -0.49
SRRM1-216ENST00000489130 LRRC8EQ6NSJ5 796 aa11.98□□□□□ -0.49
SRRM1-216ENST00000489130 KIAA0408Q6ZU52 694 aa11.98□□□□□ -0.49
SRRM1-216ENST00000489130 SYDE1Q6ZW31 735 aaPredicted RBP11.98□□□□□ -0.49
SRRM1-216ENST00000489130 UBE2R2Q712K3 238 aaPredicted RBP11.98□□□□□ -0.49
SRRM1-216ENST00000489130 PIWIL4Q7Z3Z4 852 aaKnown RBP11.98□□□□□ -0.49
SRRM1-216ENST00000489130 GALNT7Q86SF2 657 aa11.98□□□□□ -0.49
SRRM1-216ENST00000489130 CREG2Q8IUH2 290 aa11.98□□□□□ -0.49
SRRM1-216ENST00000489130 Q8NA96 180 aa11.98□□□□□ -0.49
SRRM1-216ENST00000489130 GABPB2Q8TAK5 448 aaPredicted RBP11.98□□□□□ -0.49
SRRM1-216ENST00000489130 PNPLA2Q96AD5 504 aa11.98□□□□□ -0.49
SRRM1-216ENST00000489130 OR2A5Q96R48 311 aa11.98□□□□□ -0.49
SRRM1-216ENST00000489130 NDNQ99608 321 aa11.98□□□□□ -0.49
SRRM1-216ENST00000489130 ZNF552Q9H707 407 aaPredicted RBP11.98□□□□□ -0.49
SRRM1-216ENST00000489130 SYNPO2LQ9H987 977 aa11.98□□□□□ -0.49
SRRM1-216ENST00000489130 ZNF304Q9HCX3 659 aa11.98□□□□□ -0.49
SRRM1-216ENST00000489130 SEMA3GQ9NS98 782 aa11.98□□□□□ -0.49
SRRM1-216ENST00000489130 UTP6Q9NYH9 597 aaKnown RBP11.98□□□□□ -0.49
SRRM1-216ENST00000489130 TRMT6Q9UJA5 497 aaKnown RBP11.98□□□□□ -0.49
SRRM1-216ENST00000489130 CDC23Q9UJX2 597 aa11.98□□□□□ -0.49
SRRM1-216ENST00000489130 MAP4K5Q9Y4K4 846 aa11.98□□□□□ -0.49
SRRM1-216ENST00000489130 HS3ST3B1Q9Y662 390 aa11.98□□□□□ -0.49
SRRM1-216ENST00000489130 MAU2Q9Y6X3 613 aa11.98□□□□□ -0.49
SRRM1-216ENST00000489130 IGLV3-12A0A075B6K2 115 aa11.97□□□□□ -0.49
SRRM1-216ENST00000489130 MASP2O00187 686 aa11.97□□□□□ -0.49
SRRM1-216ENST00000489130 IPO13O94829 963 aaKnown RBP11.97□□□□□ -0.49
SRRM1-216ENST00000489130 SYF2O95926 243 aaKnown RBP11.97□□□□□ -0.49
SRRM1-216ENST00000489130 AIMP2Q13155 320 aaKnown RBP11.97□□□□□ -0.49
SRRM1-216ENST00000489130 SP140Q13342 867 aa11.97□□□□□ -0.49
SRRM1-216ENST00000489130 TSTA3Q13630 321 aaPredicted RBP11.97□□□□□ -0.49
SRRM1-216ENST00000489130 UBAP2LQ14157 1087 aaKnown RBP11.97□□□□□ -0.49
SRRM1-216ENST00000489130 MORF4L2Q15014 288 aa11.97□□□□□ -0.49
SRRM1-216ENST00000489130 UGT3A1Q6NUS8 523 aa11.97□□□□□ -0.49
SRRM1-216ENST00000489130 KIRREL2Q6UWL6 708 aa11.97□□□□□ -0.49
SRRM1-216ENST00000489130 IGFL3Q6UXB1 125 aa11.97□□□□□ -0.49
SRRM1-216ENST00000489130 IGDCC3Q8IVU1 814 aa11.97□□□□□ -0.49
SRRM1-216ENST00000489130 ARHGEF39Q8N4T4 335 aa11.97□□□□□ -0.49
SRRM1-216ENST00000489130 CSNK1A1LQ8N752 337 aa11.97□□□□□ -0.49
SRRM1-216ENST00000489130 EFCAB3Q8N7B9 438 aa11.97□□□□□ -0.49
SRRM1-216ENST00000489130 GALNT11Q8NCW6 608 aa11.97□□□□□ -0.49
SRRM1-216ENST00000489130 MVB12AQ96EY5 273 aa11.97□□□□□ -0.49
SRRM1-216ENST00000489130 CERS2Q96G23 380 aa11.97□□□□□ -0.49
SRRM1-216ENST00000489130 PDLIM2Q96JY6 352 aa11.97□□□□□ -0.49
SRRM1-216ENST00000489130 CABS1Q96KC9 395 aa11.97□□□□□ -0.49
SRRM1-216ENST00000489130 RUNDC3BQ96NL0 473 aa11.97□□□□□ -0.49
SRRM1-216ENST00000489130 SOX17Q9H6I2 414 aaPredicted RBP11.97□□□□□ -0.49
SRRM1-216ENST00000489130 PLAC1Q9HBJ0 212 aa11.97□□□□□ -0.49
SRRM1-216ENST00000489130 ATP13A2Q9NQ11 1180 aa11.97□□□□□ -0.49
SRRM1-216ENST00000489130 TAS2R13Q9NYV9 303 aa11.97□□□□□ -0.49
SRRM1-216ENST00000489130 ZNF282Q9UDV7 671 aaPredicted RBP11.97□□□□□ -0.49
SRRM1-216ENST00000489130 FBXL4Q9UKA2 621 aa11.97□□□□□ -0.49
SRRM1-216ENST00000489130 RUVBL1Q9Y265 456 aaKnown RBP11.97□□□□□ -0.49
SRRM1-216ENST00000489130 PCM1Q15154 2024 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 VPS4BO75351 444 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 AHSGP02765 367 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 C8GP07360 202 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 ZGLP1P0C6A0 271 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 CARSP49589 748 aaKnown RBP11.96□□□□□ -0.49
SRRM1-216ENST00000489130 RGS4P49798 205 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 CDKN2DP55273 166 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 GNG11P61952 73 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 TBPL1P62380 186 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 DR1Q01658 176 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 SRSF1Q07955 248 aaKnown RBP eCLIP11.96□□□□□ -0.49
SRRM1-216ENST00000489130 DSG2Q14126 1118 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 HKDC1Q2TB90 917 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 BBS9Q3SYG4 887 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 RBM20Q5T481 1227 aaKnown RBP11.96□□□□□ -0.49
SRRM1-216ENST00000489130 GARNL3Q5VVW2 1013 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 PRAMEF13Q5VWM6 474 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 HIBCHQ6NVY1 386 aaPredicted RBP11.96□□□□□ -0.49
SRRM1-216ENST00000489130 SHISA6Q6ZSJ9 500 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 PDIK1LQ8N165 341 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 STT3BQ8TCJ2 826 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 EEF1AKMT1Q8WVE0 214 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 RERGQ96A58 199 aaPredicted RBP11.96□□□□□ -0.49
SRRM1-216ENST00000489130 COL26A1Q96A83 441 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 LRRC39Q96DD0 335 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 CAPZA3Q96KX2 299 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 CCDC138Q96M89 665 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 NAPGQ99747 312 aaPredicted RBP11.96□□□□□ -0.49
SRRM1-216ENST00000489130 WDR83Q9BRX9 315 aaKnown RBP11.96□□□□□ -0.49
SRRM1-216ENST00000489130 MFRPQ9BY79 579 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 SLAMF7Q9NQ25 335 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 CCDC177Q9NQR7 707 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms