RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 ARF3P61204 181 aaPredicted RBP21.96■■□□□ 1.11
COL9A3-213ENST00000489045 TAP2Q03519 686 aa21.96■■□□□ 1.11
COL9A3-213ENST00000489045 PRDX1Q06830 199 aaKnown RBP21.96■■□□□ 1.11
COL9A3-213ENST00000489045 MYBPC3Q14896 1274 aa21.96■■□□□ 1.11
COL9A3-213ENST00000489045 MSS51Q4VC12 460 aa21.96■■□□□ 1.11
COL9A3-213ENST00000489045 SLC6A19Q695T7 634 aa21.96■■□□□ 1.11
COL9A3-213ENST00000489045 PCGF5Q86SE9 256 aa21.96■■□□□ 1.11
COL9A3-213ENST00000489045 C2CD4AQ8NCU7 369 aaPredicted RBP21.96■■□□□ 1.11
COL9A3-213ENST00000489045 NACC2Q96BF6 587 aa21.96■■□□□ 1.11
COL9A3-213ENST00000489045 C10orf90Q96M02 699 aa21.96■■□□□ 1.11
COL9A3-213ENST00000489045 NDNQ99608 321 aa21.96■■□□□ 1.11
COL9A3-213ENST00000489045 EBNA1BP2Q99848 306 aaKnown RBP21.96■■□□□ 1.11
COL9A3-213ENST00000489045 SYNPO2LQ9H987 977 aa21.96■■□□□ 1.11
COL9A3-213ENST00000489045 ZNF304Q9HCX3 659 aa21.96■■□□□ 1.11
COL9A3-213ENST00000489045 C5AR2Q9P296 337 aa21.96■■□□□ 1.11
COL9A3-213ENST00000489045 FBXL4Q9UKA2 621 aa21.96■■□□□ 1.11
COL9A3-213ENST00000489045 NXT1Q9UKK6 140 aaKnown RBP21.96■■□□□ 1.11
COL9A3-213ENST00000489045 SMAPO00193 183 aa21.95■■□□□ 1.1
COL9A3-213ENST00000489045 ZBTB14O43829 449 aa21.95■■□□□ 1.1
COL9A3-213ENST00000489045 ALOX12BO75342 701 aa21.95■■□□□ 1.1
COL9A3-213ENST00000489045 TTC4O95801 387 aa21.95■■□□□ 1.1
COL9A3-213ENST00000489045 SKIV2L2P42285 1042 aaKnown RBP21.95■■□□□ 1.1
COL9A3-213ENST00000489045 UBAP2LQ14157 1087 aaKnown RBP21.95■■□□□ 1.1
COL9A3-213ENST00000489045 MUM1Q2TAK8 710 aa21.95■■□□□ 1.1
COL9A3-213ENST00000489045 PRTGQ2VWP7 1150 aa21.95■■□□□ 1.1
COL9A3-213ENST00000489045 SPANXN3Q5MJ09 141 aa21.95■■□□□ 1.1
COL9A3-213ENST00000489045 ZNF425Q6IV72 752 aa21.95■■□□□ 1.1
COL9A3-213ENST00000489045 UBE2R2Q712K3 238 aaPredicted RBP21.95■■□□□ 1.1
COL9A3-213ENST00000489045 Q8NA96 180 aa21.95■■□□□ 1.1
COL9A3-213ENST00000489045 COL26A1Q96A83 441 aa21.95■■□□□ 1.1
COL9A3-213ENST00000489045 CABS1Q96KC9 395 aa21.95■■□□□ 1.1
COL9A3-213ENST00000489045 CAPZA3Q96KX2 299 aa21.95■■□□□ 1.1
COL9A3-213ENST00000489045 ATP13A2Q9NQ11 1180 aa21.95■■□□□ 1.1
COL9A3-213ENST00000489045 TRMT6Q9UJA5 497 aaKnown RBP21.95■■□□□ 1.1
COL9A3-213ENST00000489045 HS3ST3B1Q9Y662 390 aa21.95■■□□□ 1.1
COL9A3-213ENST00000489045 USP9XQ93008 2570 aaPredicted RBP21.95■■□□□ 1.1
COL9A3-213ENST00000489045 VSTM2BA6NLU5 285 aa21.94■■□□□ 1.1
COL9A3-213ENST00000489045 EIF3FO00303 357 aaPredicted RBP21.94■■□□□ 1.1
COL9A3-213ENST00000489045 SOCS6O14544 535 aa21.94■■□□□ 1.1
COL9A3-213ENST00000489045 ALPPP05187 535 aa21.94■■□□□ 1.1
COL9A3-213ENST00000489045 IVDP26440 423 aa21.94■■□□□ 1.1
COL9A3-213ENST00000489045 IMPA1P29218 277 aa21.94■■□□□ 1.1
COL9A3-213ENST00000489045 TIAL1Q01085 375 aaKnown RBP eCLIP21.94■■□□□ 1.1
COL9A3-213ENST00000489045 BBS9Q3SYG4 887 aa21.94■■□□□ 1.1
COL9A3-213ENST00000489045 PRR30Q53SZ7 412 aaPredicted RBP21.94■■□□□ 1.1
COL9A3-213ENST00000489045 PRMT9Q6P2P2 845 aa21.94■■□□□ 1.1
COL9A3-213ENST00000489045 IGDCC3Q8IVU1 814 aa21.94■■□□□ 1.1
COL9A3-213ENST00000489045 LRRC56Q8IYG6 542 aaPredicted RBP21.94■■□□□ 1.1
COL9A3-213ENST00000489045 GABPB2Q8TAK5 448 aaPredicted RBP21.94■■□□□ 1.1
COL9A3-213ENST00000489045 PNPLA2Q96AD5 504 aa21.94■■□□□ 1.1
COL9A3-213ENST00000489045 ZNF552Q9H707 407 aaPredicted RBP21.94■■□□□ 1.1
COL9A3-213ENST00000489045 SLAMF7Q9NQ25 335 aa21.94■■□□□ 1.1
COL9A3-213ENST00000489045 UTP6Q9NYH9 597 aaKnown RBP21.94■■□□□ 1.1
COL9A3-213ENST00000489045 MAP4K5Q9Y4K4 846 aa21.94■■□□□ 1.1
COL9A3-213ENST00000489045 CLEC18AA5D8T8 446 aa21.93■■□□□ 1.1
COL9A3-213ENST00000489045 KLHL41O60662 606 aa21.93■■□□□ 1.1
COL9A3-213ENST00000489045 VPS4BO75351 444 aa21.93■■□□□ 1.1
COL9A3-213ENST00000489045 EZRP15311 586 aaKnown RBP21.93■■□□□ 1.1
COL9A3-213ENST00000489045 ITGA3P26006 1051 aa21.93■■□□□ 1.1
COL9A3-213ENST00000489045 UQCRFS1P47985 274 aa21.93■■□□□ 1.1
COL9A3-213ENST00000489045 SOX8P57073 446 aa21.93■■□□□ 1.1
COL9A3-213ENST00000489045 ABATP80404 500 aa21.93■■□□□ 1.1
COL9A3-213ENST00000489045 AIMP2Q13155 320 aaKnown RBP21.93■■□□□ 1.1
COL9A3-213ENST00000489045 RBBP7Q16576 425 aa21.93■■□□□ 1.1
COL9A3-213ENST00000489045 HKDC1Q2TB90 917 aa21.93■■□□□ 1.1
COL9A3-213ENST00000489045 RBM20Q5T481 1227 aaKnown RBP21.93■■□□□ 1.1
COL9A3-213ENST00000489045 THEMIS2Q5TEJ8 643 aa21.93■■□□□ 1.1
COL9A3-213ENST00000489045 UGT3A1Q6NUS8 523 aa21.93■■□□□ 1.1
COL9A3-213ENST00000489045 CLEC18BQ6UXF7 455 aa21.93■■□□□ 1.1
COL9A3-213ENST00000489045 ADCK2Q7Z695 626 aa21.93■■□□□ 1.1
COL9A3-213ENST00000489045 KLHL7Q8IXQ5 586 aa21.93■■□□□ 1.1
COL9A3-213ENST00000489045 CSNK1A1LQ8N752 337 aa21.93■■□□□ 1.1
COL9A3-213ENST00000489045 CLEC18CQ8NCF0 446 aa21.93■■□□□ 1.1
COL9A3-213ENST00000489045 STT3BQ8TCJ2 826 aa21.93■■□□□ 1.1
COL9A3-213ENST00000489045 CERS2Q96G23 380 aa21.93■■□□□ 1.1
COL9A3-213ENST00000489045 NAT9Q9BTE0 207 aa21.93■■□□□ 1.1
COL9A3-213ENST00000489045 SEMA3GQ9NS98 782 aa21.93■■□□□ 1.1
COL9A3-213ENST00000489045 CUEDC1Q9NWM3 386 aaPredicted RBP21.93■■□□□ 1.1
COL9A3-213ENST00000489045 VPS4AQ9UN37 437 aa21.93■■□□□ 1.1
COL9A3-213ENST00000489045 RUVBL1Q9Y265 456 aaKnown RBP21.93■■□□□ 1.1
COL9A3-213ENST00000489045 FBLP22087 321 aaKnown RBP21.92■■□□□ 1.1
COL9A3-213ENST00000489045 GABRB3P28472 473 aa21.92■■□□□ 1.1
COL9A3-213ENST00000489045 CARSP49589 748 aaKnown RBP21.92■■□□□ 1.1
COL9A3-213ENST00000489045 EMP3P54852 163 aa21.92■■□□□ 1.1
COL9A3-213ENST00000489045 GNG11P61952 73 aa21.92■■□□□ 1.1
COL9A3-213ENST00000489045 OCA2Q04671 838 aa21.92■■□□□ 1.1
COL9A3-213ENST00000489045 SRSF1Q07955 248 aaKnown RBP eCLIP21.92■■□□□ 1.12e-11■□□□□ 10.8
COL9A3-213ENST00000489045 INPP5JQ15735 1006 aaPredicted RBP21.92■■□□□ 1.1
COL9A3-213ENST00000489045 LRRC8EQ6NSJ5 796 aa21.92■■□□□ 1.1
COL9A3-213ENST00000489045 KIRREL2Q6UWL6 708 aa21.92■■□□□ 1.1
COL9A3-213ENST00000489045 CREG2Q8IUH2 290 aa21.92■■□□□ 1.1
COL9A3-213ENST00000489045 CNTN4Q8IWV2 1026 aa21.92■■□□□ 1.1
COL9A3-213ENST00000489045 PRSS58Q8IYP2 241 aa21.92■■□□□ 1.1
COL9A3-213ENST00000489045 GALNT11Q8NCW6 608 aa21.92■■□□□ 1.1
COL9A3-213ENST00000489045 EEF1AKMT1Q8WVE0 214 aa21.92■■□□□ 1.1
COL9A3-213ENST00000489045 MIEF2Q96C03 454 aa21.92■■□□□ 1.1
COL9A3-213ENST00000489045 OR2A5Q96R48 311 aa21.92■■□□□ 1.1
COL9A3-213ENST00000489045 CRB3Q9BUF7 120 aa21.92■■□□□ 1.1
COL9A3-213ENST00000489045 PLAC1Q9HBJ0 212 aa21.92■■□□□ 1.1
COL9A3-213ENST00000489045 TAS2R13Q9NYV9 303 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms