RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 CLEC18BQ6UXF7 455 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 PIWIL4Q7Z3Z4 852 aaKnown RBP11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 KCNMB4Q86W47 210 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 PAQR7Q86WK9 346 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 HPS6Q86YV9 775 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 IGDCC3Q8IVU1 814 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 LMNTD2Q8IXW0 634 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 CPNE9Q8IYJ1 553 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 FAM26EQ8N5C1 309 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 CSNK1A1LQ8N752 337 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 CLEC18CQ8NCF0 446 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 GALNT11Q8NCW6 608 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 CD200R1Q8TD46 325 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 PNPLA2Q96AD5 504 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 NACC2Q96BF6 587 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 CABS1Q96KC9 395 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 C10orf90Q96M02 699 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 NDNQ99608 321 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 MESP1Q9BRJ9 268 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 FAM167BQ9BTA0 163 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 AARSD1Q9BTE6 412 aaKnown RBP11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 ZBTB20Q9HC78 741 aaPredicted RBP11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 ANKMY1Q9P2S6 941 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 HS3ST3B1Q9Y662 390 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 COMMD10Q9Y6G5 202 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 MAST4O15021 2626 aa11.39□□□□□ -0.59
CCHCR1-215ENST00000488920 DNALI1O14645 258 aaPredicted RBP11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 VPS26AO75436 327 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 CCNDBP1O95273 360 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 ENO3P13929 434 aaPredicted RBP11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 ITGA3P26006 1051 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 GABRB3P28472 473 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 SOX8P57073 446 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 TIAL1Q01085 375 aaKnown RBP eCLIP11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 OCA2Q04671 838 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 KLC1Q07866 573 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 DHX9Q08211 1270 aaKnown RBP11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 PTK6Q13882 451 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 CRYMQ14894 314 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 RBBP7Q16576 425 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 MUM1Q2TAK8 710 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 HKDC1Q2TB90 917 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 BBS9Q3SYG4 887 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 HP1BP3Q5SSJ5 553 aaPredicted RBP11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 THEMIS2Q5TEJ8 643 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 PRAMEF13Q5VWM6 474 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 ZNF425Q6IV72 752 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 PRMT9Q6P2P2 845 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 UBE2R2Q712K3 238 aaPredicted RBP11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 ADCK2Q7Z695 626 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 PLD3Q8IV08 490 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 PARP9Q8IXQ6 854 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 FBXO15Q8NCQ5 510 aaPredicted RBP11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 C2CD4AQ8NCU7 369 aaPredicted RBP11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 STT3BQ8TCJ2 826 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 EEF1AKMT1Q8WVE0 214 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 MIEF2Q96C03 454 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 C19orf60Q96EN9 201 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 CAPZA3Q96KX2 299 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 PWWP2AQ96N64 755 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 OR2A5Q96R48 311 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 EBNA1BP2Q99848 306 aaKnown RBP11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 CRB3Q9BUF7 120 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 YIPF2Q9BWQ6 316 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 SEMA3GQ9NS98 782 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 ZNF282Q9UDV7 671 aaPredicted RBP11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 NXT1Q9UKK6 140 aaKnown RBP11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 RUVBL1Q9Y265 456 aaKnown RBP11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 B3GNT3Q9Y2A9 372 aa11.38□□□□□ -0.59
CCHCR1-215ENST00000488920 USP27XA6NNY8 438 aa11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 H7BY64 318 aa11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 FFAR3O14843 346 aa11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 GPR42O15529 346 aa11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 SNRNP200O75643 2136 aaKnown RBP11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 IPO13O94829 963 aaKnown RBP11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 AHSGP02765 367 aa11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 STATHP02808 62 aa11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 ZGLP1P0C6A0 271 aa11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 TCP1P17987 556 aaKnown RBP11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 FBLP22087 321 aaKnown RBP11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 IVDP26440 423 aa11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 IMPA1P29218 277 aa11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 SKIV2L2P42285 1042 aaKnown RBP11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 CARSP49589 748 aaKnown RBP11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 CDKN2DP55273 166 aa11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 ABATP80404 500 aa11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 VWA2Q5GFL6 755 aa11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 IGFL3Q6UXB1 125 aa11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 PCGF5Q86SE9 256 aa11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 LAPTM4BQ86VI4 370 aa11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 KLHL7Q8IXQ5 586 aa11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 LRRC56Q8IYG6 542 aaPredicted RBP11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 ZADH2Q8N4Q0 377 aa11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 CISD2Q8N5K1 135 aaKnown RBP11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 OR11G2Q8NGC1 345 aa11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 RERGQ96A58 199 aaPredicted RBP11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 PRAP1Q96NZ9 151 aa11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 PPANQ9NQ55 473 aaKnown RBP11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 CUEDC1Q9NWM3 386 aaPredicted RBP11.37□□□□□ -0.59
CCHCR1-215ENST00000488920 UTP6Q9NYH9 597 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms