RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 SH3KBP1Q96B97 665 aa18.73■□□□□ 0.59
CCM2-216ENST00000488727 PDLIM5Q96HC4 596 aaKnown RBP18.73■□□□□ 0.59
CCM2-216ENST00000488727 SLC38A3Q99624 504 aa18.73■□□□□ 0.59
CCM2-216ENST00000488727 UCK1Q9HA47 277 aa18.73■□□□□ 0.59
CCM2-216ENST00000488727 CIDEBQ9UHD4 219 aa18.73■□□□□ 0.59
CCM2-216ENST00000488727 ADAMTS6Q9UKP5 1117 aa18.73■□□□□ 0.59
CCM2-216ENST00000488727 COL27A1Q8IZC6 1860 aaPredicted RBP18.73■□□□□ 0.59
CCM2-216ENST00000488727 ANKRD12Q6UB98 2062 aa18.73■□□□□ 0.59
CCM2-216ENST00000488727 UNC13CQ8NB66 2214 aa18.73■□□□□ 0.59
CCM2-216ENST00000488727 LILRA5A6NI73 299 aa18.72■□□□□ 0.59
CCM2-216ENST00000488727 ARHGEF33A8MVX0 844 aa18.72■□□□□ 0.59
CCM2-216ENST00000488727 GFYI3L273 518 aa18.72■□□□□ 0.59
CCM2-216ENST00000488727 SDHDO14521 159 aa18.72■□□□□ 0.59
CCM2-216ENST00000488727 B4GAT1O43505 415 aa18.72■□□□□ 0.59
CCM2-216ENST00000488727 RPSAP08865 295 aaKnown RBP18.72■□□□□ 0.59
CCM2-216ENST00000488727 IMPDH1P20839 514 aa18.72■□□□□ 0.59
CCM2-216ENST00000488727 GPR3P46089 330 aa18.72■□□□□ 0.59
CCM2-216ENST00000488727 SIM1P81133 766 aaPredicted RBP18.72■□□□□ 0.59
CCM2-216ENST00000488727 GRB7Q14451 532 aa18.72■□□□□ 0.59
CCM2-216ENST00000488727 CCDC157Q569K6 752 aa18.72■□□□□ 0.59
CCM2-216ENST00000488727 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.72■□□□□ 0.59
CCM2-216ENST00000488727 LRRC74BQ6ZQY2 392 aa18.72■□□□□ 0.59
CCM2-216ENST00000488727 ISCA2Q86U28 154 aa18.72■□□□□ 0.59
CCM2-216ENST00000488727 MYO1HQ8N1T3 1032 aa18.72■□□□□ 0.59
CCM2-216ENST00000488727 NKAPQ8N5F7 415 aaKnown RBP18.72■□□□□ 0.59
CCM2-216ENST00000488727 OR52E1Q8NGJ3 308 aa18.72■□□□□ 0.59
CCM2-216ENST00000488727 FOPNLQ96NB1 174 aa18.72■□□□□ 0.59
CCM2-216ENST00000488727 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.72■□□□□ 0.59
CCM2-216ENST00000488727 TDRKHQ9Y2W6 561 aaKnown RBP18.72■□□□□ 0.59
CCM2-216ENST00000488727 A0A1W2PQM1 296 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 RFPL3O75679 317 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 JUNP05412 331 aaKnown RBP18.71■□□□□ 0.59
CCM2-216ENST00000488727 FTH1P19P0C7X4 201 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 CD1DP15813 335 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 ACADSP16219 412 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 INHBCP55103 352 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 ZRSR2Q15696 482 aaKnown RBP18.71■□□□□ 0.59
CCM2-216ENST00000488727 PDCD2Q16342 344 aaPredicted RBP18.71■□□□□ 0.59
CCM2-216ENST00000488727 DCUN1D3Q8IWE4 304 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 RHEBL1Q8TAI7 183 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 ZFPM2Q8WW38 1151 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 JADE3Q92613 823 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 NAF1Q96HR8 494 aaKnown RBP18.71■□□□□ 0.59
CCM2-216ENST00000488727 GSTO2Q9H4Y5 243 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 PLAGL1Q9UM63 463 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 PRPF19Q9UMS4 504 aaKnown RBP18.71■□□□□ 0.59
CCM2-216ENST00000488727 IGHV1OR21-1A0A087WYE8 117 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 LOC100653049A0A140TA62 436 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 NVLO15381 856 aaKnown RBP18.71■□□□□ 0.59
CCM2-216ENST00000488727 KRT34O76011 436 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 DKK1O94907 266 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 ATP6V1C1P21283 382 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 AP2B1P63010 937 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 PLCL1Q15111 1095 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 NKAIN2Q5VXU1 208 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 CUZD1Q86UP6 607 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 DEFB107AQ8IZN7 70 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 CEP70Q8NHQ1 597 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 NRG4Q8WWG1 115 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 MENTQ9BUN1 341 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 SHCBP1LQ9BZQ2 653 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 ALG9Q9H6U8 611 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 MEAF6Q9HAF1 191 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 ZBTB26Q9HCK0 441 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 NMRK1Q9NWW6 199 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 POLG2Q9UHN1 485 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 PCDHGA1Q9Y5H4 931 aa18.71■□□□□ 0.59
CCM2-216ENST00000488727 SPTBN4Q9H254 2564 aa18.71■□□□□ 0.58
CCM2-216ENST00000488727 SMIM24O75264 130 aa18.7■□□□□ 0.58
CCM2-216ENST00000488727 RPN2P04844 631 aa18.7■□□□□ 0.58
CCM2-216ENST00000488727 RPLP0P05388 317 aaKnown RBP18.7■□□□□ 0.58
CCM2-216ENST00000488727 EPHA4P54764 986 aa18.7■□□□□ 0.58
CCM2-216ENST00000488727 MTTPP55157 894 aa18.7■□□□□ 0.58
CCM2-216ENST00000488727 CCL7P80098 99 aa18.7■□□□□ 0.58
CCM2-216ENST00000488727 TBL3Q12788 808 aaKnown RBP18.7■□□□□ 0.58
CCM2-216ENST00000488727 ILKQ13418 452 aa18.7■□□□□ 0.58
CCM2-216ENST00000488727 PHKG1Q16816 387 aa18.7■□□□□ 0.58
CCM2-216ENST00000488727 ZNF678Q5SXM1 525 aa18.7■□□□□ 0.58
CCM2-216ENST00000488727 C16orf89Q6UX73 402 aa18.7■□□□□ 0.58
CCM2-216ENST00000488727 CHSY3Q70JA7 882 aa18.7■□□□□ 0.58
CCM2-216ENST00000488727 UBE2R2Q712K3 238 aaPredicted RBP18.7■□□□□ 0.58
CCM2-216ENST00000488727 SNX32Q86XE0 403 aa18.7■□□□□ 0.58
CCM2-216ENST00000488727 FBXW8Q8N3Y1 598 aa18.7■□□□□ 0.58
CCM2-216ENST00000488727 DNAJC9Q8WXX5 260 aa18.7■□□□□ 0.58
CCM2-216ENST00000488727 PTERQ96BW5 349 aa18.7■□□□□ 0.58
CCM2-216ENST00000488727 DERL2Q9GZP9 239 aa18.7■□□□□ 0.58
CCM2-216ENST00000488727 TFB2MQ9H5Q4 396 aaKnown RBP18.7■□□□□ 0.58
CCM2-216ENST00000488727 XKR8Q9H6D3 395 aa18.7■□□□□ 0.58
CCM2-216ENST00000488727 ICKQ9UPZ9 632 aa18.7■□□□□ 0.58
CCM2-216ENST00000488727 NPEPPSL1A6NEC2 478 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 TMEM233B4DJY2 109 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 CDC7O00311 574 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 CATP04040 527 aaKnown RBP18.69■□□□□ 0.58
CCM2-216ENST00000488727 ANPEPP15144 967 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 CD1CP29017 333 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 CYLC2Q14093 348 aaPredicted RBP18.69■□□□□ 0.58
CCM2-216ENST00000488727 AMZ1Q400G9 498 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 RSC1A1Q92681 617 aa18.69■□□□□ 0.58
CCM2-216ENST00000488727 N4BP2L2Q92802 583 aaPredicted RBP18.69■□□□□ 0.58
CCM2-216ENST00000488727 CATSPER2Q96P56 530 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms