RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 RNF44Q7L0R7 432 aa10.79□□□□□ -0.68
NIPAL3-207ENST00000488155 PIWIL4Q7Z3Z4 852 aaKnown RBP10.79□□□□□ -0.68
NIPAL3-207ENST00000488155 KCNMB4Q86W47 210 aa10.79□□□□□ -0.68
NIPAL3-207ENST00000488155 PLD3Q8IV08 490 aa10.79□□□□□ -0.68
NIPAL3-207ENST00000488155 CISD2Q8N5K1 135 aaKnown RBP10.79□□□□□ -0.68
NIPAL3-207ENST00000488155 GRK7Q8WTQ7 553 aa10.79□□□□□ -0.68
NIPAL3-207ENST00000488155 ZNF480Q8WV37 535 aa10.79□□□□□ -0.68
NIPAL3-207ENST00000488155 INPP5DQ92835 1189 aa10.79□□□□□ -0.68
NIPAL3-207ENST00000488155 PNPLA2Q96AD5 504 aa10.79□□□□□ -0.68
NIPAL3-207ENST00000488155 FKBP10Q96AY3 582 aa10.79□□□□□ -0.68
NIPAL3-207ENST00000488155 ZNF285Q96NJ3 590 aa10.79□□□□□ -0.68
NIPAL3-207ENST00000488155 NDNQ99608 321 aa10.79□□□□□ -0.68
NIPAL3-207ENST00000488155 ZFYVE21Q9BQ24 234 aa10.79□□□□□ -0.68
NIPAL3-207ENST00000488155 DDX47Q9H0S4 455 aaKnown RBP10.79□□□□□ -0.68
NIPAL3-207ENST00000488155 FAM114A2Q9NRY5 505 aa10.79□□□□□ -0.68
NIPAL3-207ENST00000488155 ASIC3Q9UHC3 531 aa10.79□□□□□ -0.68
NIPAL3-207ENST00000488155 FBXO5Q9UKT4 447 aa10.79□□□□□ -0.68
NIPAL3-207ENST00000488155 HS3ST3B1Q9Y662 390 aa10.79□□□□□ -0.68
NIPAL3-207ENST00000488155 IGKV1-8A0A0C4DH67 115 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 TCP11X1B4DZS4 312 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 SMAPO00193 183 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 AGFG2O95081 481 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 SLC16A8O95907 504 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 IGHEP01854 428 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 ALBP02768 609 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 ALPPP05187 535 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 ERGP11308 486 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 FBLP22087 321 aaKnown RBP10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 GLRBP48167 497 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 OCA2Q04671 838 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 KLC1Q07866 573 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 DHX9Q08211 1270 aaKnown RBP10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 AIMP2Q13155 320 aaKnown RBP10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 HIF1AQ16665 826 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 MUM1Q2TAK8 710 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 EIF2S3LQ2VIR3 472 aaKnown RBP10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 RNASEH2BQ5TBB1 312 aaKnown RBP10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 FHL5Q5TD97 284 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 ICE2Q659A1 982 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 FAAH2Q6GMR7 532 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 KIRREL2Q6UWL6 708 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 CYHR1Q6ZMK1 362 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 UBE2R2Q712K3 238 aaPredicted RBP10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 LAPTM4BQ86VI4 370 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 PAQR7Q86WK9 346 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 PPIL6Q8IXY8 311 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 GALNT11Q8NCW6 608 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 STT3BQ8TCJ2 826 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 CD200R1Q8TD46 325 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 CALML6Q8TD86 181 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 ACTRT1Q8TDG2 376 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 ALKBH8Q96BT7 664 aaKnown RBP10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 C8orf44Q96CB5 159 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 CAPZA3Q96KX2 299 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 C10orf90Q96M02 699 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 PWWP2AQ96N64 755 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 PLCD4Q9BRC7 762 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 AARSD1Q9BTE6 412 aaKnown RBP10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 CRB3Q9BUF7 120 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 ILKAPQ9H0C8 392 aaPredicted RBP10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 KCNF1Q9H3M0 494 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 WDR54Q9H977 334 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 CUEDC1Q9NWM3 386 aaPredicted RBP10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 C5AR2Q9P296 337 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 SLC17A6Q9P2U8 582 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 PCYOX1Q9UHG3 505 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 SNX12Q9UMY4 172 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 DHRS7Q9Y394 339 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 CSAG2Q9Y5P2 127 aa10.78□□□□□ -0.68
NIPAL3-207ENST00000488155 CLEC18AA5D8T8 446 aa10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 E7ENX8 843 aa10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 DNALI1O14645 258 aaPredicted RBP10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 HAT1O14929 419 aa10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 ZSCAN12O43309 604 aa10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 ZBTB14O43829 449 aa10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 VPS26AO75436 327 aa10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 ONECUT2O95948 504 aa10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 ZGLP1P0C6A0 271 aa10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 MPC1LP0DKB6 136 aa10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 IMPA1P29218 277 aa10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 MAGEA3P43357 314 aa10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 FNTAP49354 379 aa10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 PGGT1BP53609 377 aa10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 TAP2Q03519 686 aa10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 PRDX1Q06830 199 aaKnown RBP10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 ARHGAP19Q14CB8 494 aa10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 SYT16Q17RD7 645 aa10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 PRTGQ2VWP7 1150 aa10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 BBS9Q3SYG4 887 aa10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 TUBB8Q3ZCM7 444 aa10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 MSS51Q4VC12 460 aa10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 RBM20Q5T481 1227 aaKnown RBP10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 PRAMEF13Q5VWM6 474 aa10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 HIST2H2BCQ6DN03 193 aa10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 CLEC18BQ6UXF7 455 aa10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 MBOAT1Q6ZNC8 495 aa10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 NEK10Q6ZWH5 1172 aa10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 ZADH2Q8N4Q0 377 aa10.77□□□□□ -0.69
NIPAL3-207ENST00000488155 CSNK1A1LQ8N752 337 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms