RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 LMAN1P49257 510 aa3.06□□□□□ -1.92
CCDC66-221ENST00000487739 ZNF177Q13360 481 aaPredicted RBP3.06□□□□□ -1.92
CCDC66-221ENST00000487739 VITQ6UXI7 678 aa3.06□□□□□ -1.92
CCDC66-221ENST00000487739 NDUFAF2Q8N183 169 aa3.06□□□□□ -1.92
CCDC66-221ENST00000487739 FGFRL1Q8N441 504 aa3.06□□□□□ -1.92
CCDC66-221ENST00000487739 Q8N7P7 452 aa3.06□□□□□ -1.92
CCDC66-221ENST00000487739 POC5Q8NA72 575 aa3.06□□□□□ -1.92
CCDC66-221ENST00000487739 TYMSOSQ8TAI1 123 aa3.06□□□□□ -1.92
CCDC66-221ENST00000487739 CALML4Q96GE6 196 aa3.06□□□□□ -1.92
CCDC66-221ENST00000487739 C2orf48Q96LS8 159 aa3.06□□□□□ -1.92
CCDC66-221ENST00000487739 FAM218AQ96MZ4 157 aa3.06□□□□□ -1.92
CCDC66-221ENST00000487739 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.06□□□□□ -1.92
CCDC66-221ENST00000487739 THAP10Q9P2Z0 257 aaPredicted RBP3.06□□□□□ -1.92
CCDC66-221ENST00000487739 ABT1Q9ULW3 272 aaKnown RBP3.06□□□□□ -1.92
CCDC66-221ENST00000487739 PTRH2Q9Y3E5 179 aaKnown RBP3.06□□□□□ -1.92
CCDC66-221ENST00000487739 STYXL1Q9Y6J8 313 aa3.06□□□□□ -1.92
CCDC66-221ENST00000487739 ATRXP46100 2492 aa3.05□□□□□ -1.92
CCDC66-221ENST00000487739 IGLV4-3A0A075B6K6 122 aa3.05□□□□□ -1.92
CCDC66-221ENST00000487739 A0A1W2PQ09 198 aa3.05□□□□□ -1.92
CCDC66-221ENST00000487739 NEMP2A6NFY4 417 aa3.05□□□□□ -1.92
CCDC66-221ENST00000487739 ADAMDEC1O15204 470 aa3.05□□□□□ -1.92
CCDC66-221ENST00000487739 IPO8O15397 1037 aaKnown RBP3.05□□□□□ -1.92
CCDC66-221ENST00000487739 LRCH4O75427 683 aa3.05□□□□□ -1.92
CCDC66-221ENST00000487739 DHODHQ02127 395 aa3.05□□□□□ -1.92
CCDC66-221ENST00000487739 TRIM29Q14134 588 aa3.05□□□□□ -1.92
CCDC66-221ENST00000487739 DUSP28Q4G0W2 176 aa3.05□□□□□ -1.92
CCDC66-221ENST00000487739 GARNL3Q5VVW2 1013 aa3.05□□□□□ -1.92
CCDC66-221ENST00000487739 MFSD12Q6NUT3 480 aa3.05□□□□□ -1.92
CCDC66-221ENST00000487739 FCRLAQ7L513 359 aa3.05□□□□□ -1.92
CCDC66-221ENST00000487739 NUP54Q7Z3B4 507 aa3.05□□□□□ -1.92
CCDC66-221ENST00000487739 ZNF595Q8IYB9 648 aa3.05□□□□□ -1.92
CCDC66-221ENST00000487739 FAM89BQ8N5H3 189 aa3.05□□□□□ -1.92
CCDC66-221ENST00000487739 RFT1Q96AA3 541 aa3.05□□□□□ -1.92
CCDC66-221ENST00000487739 SPACA9Q96E40 222 aaPredicted RBP3.05□□□□□ -1.92
CCDC66-221ENST00000487739 FAM120BQ96EK7 910 aaKnown RBP3.05□□□□□ -1.92
CCDC66-221ENST00000487739 ZMYND12Q9H0C1 365 aa3.05□□□□□ -1.92
CCDC66-221ENST00000487739 FBXO2Q9UK22 296 aaPredicted RBP3.05□□□□□ -1.92
CCDC66-221ENST00000487739 CHKBQ9Y259 395 aa3.05□□□□□ -1.92
CCDC66-221ENST00000487739 ZNF646O15015 1829 aaPredicted RBP3.05□□□□□ -1.92
CCDC66-221ENST00000487739 TRBV5-5A0A0J9YX44 114 aa3.04□□□□□ -1.92
CCDC66-221ENST00000487739 TRIM49BA6NDI0 452 aa3.04□□□□□ -1.92
CCDC66-221ENST00000487739 AGAP14A8MT82 685 aa3.04□□□□□ -1.92
CCDC66-221ENST00000487739 NPIPB9F8W1W9 429 aa3.04□□□□□ -1.92
CCDC66-221ENST00000487739 G3V2L1 256 aa3.04□□□□□ -1.92
CCDC66-221ENST00000487739 ATP1B1P05026 303 aa3.04□□□□□ -1.92
CCDC66-221ENST00000487739 IRF2P14316 349 aa3.04□□□□□ -1.92
CCDC66-221ENST00000487739 DNASE1P24855 282 aa3.04□□□□□ -1.92
CCDC66-221ENST00000487739 ELAVL4P26378 380 aaKnown RBP3.04□□□□□ -1.92
CCDC66-221ENST00000487739 GCH1P30793 250 aa3.04□□□□□ -1.92
CCDC66-221ENST00000487739 ZNF75DP51815 510 aa3.04□□□□□ -1.92
CCDC66-221ENST00000487739 CDH13P55290 713 aa3.04□□□□□ -1.92
CCDC66-221ENST00000487739 MC1RQ01726 317 aa3.04□□□□□ -1.92
CCDC66-221ENST00000487739 HSPB3Q12988 150 aa3.04□□□□□ -1.92
CCDC66-221ENST00000487739 MCMDC2Q4G0Z9 681 aa3.04□□□□□ -1.92
CCDC66-221ENST00000487739 FAM166AQ6J272 317 aa3.04□□□□□ -1.92
CCDC66-221ENST00000487739 BAIAP2L2Q6UXY1 529 aa3.04□□□□□ -1.92
CCDC66-221ENST00000487739 C3P1Q6ZMU1 363 aa3.04□□□□□ -1.92
CCDC66-221ENST00000487739 KRTAP5-5Q701N2 237 aaPredicted RBP3.04□□□□□ -1.92
CCDC66-221ENST00000487739 TIPARPQ7Z3E1 657 aaKnown RBP3.04□□□□□ -1.92
CCDC66-221ENST00000487739 RNF130Q86XS8 419 aa3.04□□□□□ -1.92
CCDC66-221ENST00000487739 ZBED8Q8IZ13 594 aa3.04□□□□□ -1.92
CCDC66-221ENST00000487739 SLC34A3Q8N130 599 aa3.04□□□□□ -1.92
CCDC66-221ENST00000487739 OR4K1Q8NGD4 311 aa3.04□□□□□ -1.92
CCDC66-221ENST00000487739 OR10S1Q8NGN2 331 aa3.04□□□□□ -1.92
CCDC66-221ENST00000487739 OR10G7Q8NGN6 311 aa3.04□□□□□ -1.92
CCDC66-221ENST00000487739 OR10Q1Q8NGQ4 319 aa3.04□□□□□ -1.92
CCDC66-221ENST00000487739 CNOT6LQ96LI5 555 aaKnown RBP3.04□□□□□ -1.92
CCDC66-221ENST00000487739 TIGD1Q96MW7 591 aa3.04□□□□□ -1.92
CCDC66-221ENST00000487739 CCDC3Q9BQI4 270 aa3.04□□□□□ -1.92
CCDC66-221ENST00000487739 ZNF215Q9UL58 517 aaPredicted RBP3.04□□□□□ -1.92
CCDC66-221ENST00000487739 IGKV6D-21A0A0A0MT36 114 aa3.03□□□□□ -1.92
CCDC66-221ENST00000487739 SURF4O15260 269 aa3.03□□□□□ -1.92
CCDC66-221ENST00000487739 MPZP25189 248 aa3.03□□□□□ -1.92
CCDC66-221ENST00000487739 VAMP7P51809 220 aa3.03□□□□□ -1.92
CCDC66-221ENST00000487739 STAT2P52630 851 aa3.03□□□□□ -1.92
CCDC66-221ENST00000487739 MAPK12P53778 367 aa3.03□□□□□ -1.92
CCDC66-221ENST00000487739 ITGA7Q13683 1181 aa3.03□□□□□ -1.92
CCDC66-221ENST00000487739 C3AR1Q16581 482 aa3.03□□□□□ -1.92
CCDC66-221ENST00000487739 SPECC1Q5M775 1068 aa3.03□□□□□ -1.92
CCDC66-221ENST00000487739 SZRD1Q7Z422 152 aa3.03□□□□□ -1.92
CCDC66-221ENST00000487739 KRTAP11-1Q8IUC1 163 aa3.03□□□□□ -1.92
CCDC66-221ENST00000487739 OR4N5Q8IXE1 308 aa3.03□□□□□ -1.92
CCDC66-221ENST00000487739 C17orf53Q8N3J3 647 aaPredicted RBP3.03□□□□□ -1.92
CCDC66-221ENST00000487739 TEX12Q9BXU0 123 aa3.03□□□□□ -1.92
CCDC66-221ENST00000487739 SLC35C2Q9NQQ7 365 aa3.03□□□□□ -1.92
CCDC66-221ENST00000487739 IGSF1Q8N6C5 1336 aa3.02□□□□□ -1.93
CCDC66-221ENST00000487739 ZNF840PA6NDX5 716 aa3.02□□□□□ -1.93
CCDC66-221ENST00000487739 PHF1O43189 567 aaPredicted RBP3.02□□□□□ -1.93
CCDC66-221ENST00000487739 ZBED4O75132 1171 aa3.02□□□□□ -1.93
CCDC66-221ENST00000487739 BAIAP3O94812 1187 aa3.02□□□□□ -1.93
CCDC66-221ENST00000487739 SLCO2B1O94956 709 aa3.02□□□□□ -1.93
CCDC66-221ENST00000487739 NXPH4O95158 308 aa3.02□□□□□ -1.93
CCDC66-221ENST00000487739 AOC1P19801 751 aa3.02□□□□□ -1.93
CCDC66-221ENST00000487739 SAT1P21673 171 aa3.02□□□□□ -1.93
CCDC66-221ENST00000487739 DLK1P80370 383 aa3.02□□□□□ -1.93
CCDC66-221ENST00000487739 CREB5Q02930 508 aa3.02□□□□□ -1.93
CCDC66-221ENST00000487739 TRAP1Q12931 704 aaKnown RBP3.02□□□□□ -1.93
CCDC66-221ENST00000487739 DDX10Q13206 875 aaKnown RBP3.02□□□□□ -1.93
CCDC66-221ENST00000487739 GPR33Q49SQ1 333 aa3.02□□□□□ -1.93
CCDC66-221ENST00000487739 OR4A47Q6IF82 309 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms