RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.52■■□□□ 1.2
PLOD3-215ENST00000487563 PPFIBP2Q8ND30 876 aa22.52■■□□□ 1.2
PLOD3-215ENST00000487563 GIMAP7Q8NHV1 300 aa22.52■■□□□ 1.2
PLOD3-215ENST00000487563 COG1Q8WTW3 980 aa22.52■■□□□ 1.2
PLOD3-215ENST00000487563 MIEF2Q96C03 454 aa22.52■■□□□ 1.2
PLOD3-215ENST00000487563 GPR21Q99679 349 aa22.52■■□□□ 1.2
PLOD3-215ENST00000487563 PLCD4Q9BRC7 762 aa22.52■■□□□ 1.2
PLOD3-215ENST00000487563 FAM167BQ9BTA0 163 aa22.52■■□□□ 1.2
PLOD3-215ENST00000487563 LRRC4CQ9HCJ2 640 aa22.52■■□□□ 1.2
PLOD3-215ENST00000487563 STOX2Q9P2F5 926 aaPredicted RBP22.52■■□□□ 1.2
PLOD3-215ENST00000487563 ZNF282Q9UDV7 671 aaPredicted RBP22.52■■□□□ 1.2
PLOD3-215ENST00000487563 NEU2Q9Y3R4 380 aa22.52■■□□□ 1.2
PLOD3-215ENST00000487563 PCM1Q15154 2024 aa22.52■■□□□ 1.19
PLOD3-215ENST00000487563 H0YGG7 62 aa22.51■■□□□ 1.19
PLOD3-215ENST00000487563 SMAPO00193 183 aa22.51■■□□□ 1.19
PLOD3-215ENST00000487563 MED26O95402 600 aa22.51■■□□□ 1.19
PLOD3-215ENST00000487563 MAGEA3P43357 314 aa22.51■■□□□ 1.19
PLOD3-215ENST00000487563 CARSP49589 748 aaKnown RBP22.51■■□□□ 1.19
PLOD3-215ENST00000487563 ARF3P61204 181 aaPredicted RBP22.51■■□□□ 1.19
PLOD3-215ENST00000487563 THEMIS2Q5TEJ8 643 aa22.51■■□□□ 1.19
PLOD3-215ENST00000487563 ZNF549Q6P9A3 640 aa22.51■■□□□ 1.19
PLOD3-215ENST00000487563 IGFL3Q6UXB1 125 aa22.51■■□□□ 1.19
PLOD3-215ENST00000487563 CSNK1A1LQ8N752 337 aa22.51■■□□□ 1.19
PLOD3-215ENST00000487563 STT3BQ8TCJ2 826 aa22.51■■□□□ 1.19
PLOD3-215ENST00000487563 ACTRT1Q8TDG2 376 aa22.51■■□□□ 1.19
PLOD3-215ENST00000487563 INPP5DQ92835 1189 aa22.51■■□□□ 1.19
PLOD3-215ENST00000487563 RERGQ96A58 199 aaPredicted RBP22.51■■□□□ 1.19
PLOD3-215ENST00000487563 FBXO5Q9UKT4 447 aa22.51■■□□□ 1.19
PLOD3-215ENST00000487563 CDC14AQ9UNH5 594 aa22.51■■□□□ 1.19
PLOD3-215ENST00000487563 DHRS7Q9Y394 339 aa22.51■■□□□ 1.19
PLOD3-215ENST00000487563 VSTM2BA6NLU5 285 aa22.5■■□□□ 1.19
PLOD3-215ENST00000487563 PRPF4O43172 522 aaKnown RBP eCLIP22.5■■□□□ 1.19
PLOD3-215ENST00000487563 ZSCAN12O43309 604 aa22.5■■□□□ 1.19
PLOD3-215ENST00000487563 ZBTB14O43829 449 aa22.5■■□□□ 1.19
PLOD3-215ENST00000487563 GP1BBP13224 206 aa22.5■■□□□ 1.19
PLOD3-215ENST00000487563 MPP1Q00013 466 aa22.5■■□□□ 1.19
PLOD3-215ENST00000487563 PRDX1Q06830 199 aaKnown RBP22.5■■□□□ 1.19
PLOD3-215ENST00000487563 HSP90AA5PQ58FG0 334 aa22.5■■□□□ 1.19
PLOD3-215ENST00000487563 FBXO42Q6P3S6 717 aa22.5■■□□□ 1.19
PLOD3-215ENST00000487563 KIRREL2Q6UWL6 708 aa22.5■■□□□ 1.19
PLOD3-215ENST00000487563 KCNMB4Q86W47 210 aa22.5■■□□□ 1.19
PLOD3-215ENST00000487563 PAQR7Q86WK9 346 aa22.5■■□□□ 1.19
PLOD3-215ENST00000487563 PARP9Q8IXQ6 854 aa22.5■■□□□ 1.19
PLOD3-215ENST00000487563 FBXO15Q8NCQ5 510 aaPredicted RBP22.5■■□□□ 1.19
PLOD3-215ENST00000487563 GABPB2Q8TAK5 448 aaPredicted RBP22.5■■□□□ 1.19
PLOD3-215ENST00000487563 ZNF480Q8WV37 535 aa22.5■■□□□ 1.19
PLOD3-215ENST00000487563 SIGLEC10Q96LC7 697 aa22.5■■□□□ 1.19
PLOD3-215ENST00000487563 C10orf90Q96M02 699 aa22.5■■□□□ 1.19
PLOD3-215ENST00000487563 YIPF2Q9BWQ6 316 aa22.5■■□□□ 1.19
PLOD3-215ENST00000487563 IARS2Q9NSE4 1012 aaKnown RBP22.5■■□□□ 1.19
PLOD3-215ENST00000487563 ASIC3Q9UHC3 531 aa22.5■■□□□ 1.19
PLOD3-215ENST00000487563 SHANK1Q9Y566 2161 aa22.5■■□□□ 1.19
PLOD3-215ENST00000487563 TCP11X1B4DZS4 312 aa22.49■■□□□ 1.19
PLOD3-215ENST00000487563 ZGLP1P0C6A0 271 aa22.49■■□□□ 1.19
PLOD3-215ENST00000487563 EZRP15311 586 aaKnown RBP22.49■■□□□ 1.19
PLOD3-215ENST00000487563 PGAM1P18669 254 aa22.49■■□□□ 1.19
PLOD3-215ENST00000487563 ABATP80404 500 aa22.49■■□□□ 1.19
PLOD3-215ENST00000487563 KLC1Q07866 573 aa22.49■■□□□ 1.19
PLOD3-215ENST00000487563 PTK6Q13882 451 aa22.49■■□□□ 1.19
PLOD3-215ENST00000487563 PRTGQ2VWP7 1150 aa22.49■■□□□ 1.19
PLOD3-215ENST00000487563 AGAP7PQ5VUJ5 663 aa22.49■■□□□ 1.19
PLOD3-215ENST00000487563 UBE2R2Q712K3 238 aaPredicted RBP22.49■■□□□ 1.19
PLOD3-215ENST00000487563 CPNE9Q8IYJ1 553 aa22.49■■□□□ 1.19
PLOD3-215ENST00000487563 AGGF1Q8N302 714 aaeCLIP22.49■■□□□ 1.19
PLOD3-215ENST00000487563 CISD2Q8N5K1 135 aaKnown RBP22.49■■□□□ 1.19
PLOD3-215ENST00000487563 CD200R1Q8TD46 325 aa22.49■■□□□ 1.19
PLOD3-215ENST00000487563 ASB11Q8WXH4 323 aa22.49■■□□□ 1.19
PLOD3-215ENST00000487563 SNRNP40Q96DI7 357 aaKnown RBP22.49■■□□□ 1.19
PLOD3-215ENST00000487563 AGAP4Q96P64 663 aa22.49■■□□□ 1.19
PLOD3-215ENST00000487563 PCYOX1Q9UHG3 505 aa22.49■■□□□ 1.19
PLOD3-215ENST00000487563 TRMT6Q9UJA5 497 aaKnown RBP22.49■■□□□ 1.19
PLOD3-215ENST00000487563 C3orf18Q9UK00 162 aa22.49■■□□□ 1.19
PLOD3-215ENST00000487563 RUVBL1Q9Y265 456 aaKnown RBP22.49■■□□□ 1.19
PLOD3-215ENST00000487563 MED16Q9Y2X0 877 aa22.49■■□□□ 1.19
PLOD3-215ENST00000487563 IGKV1-8A0A0C4DH67 115 aa22.48■■□□□ 1.19
PLOD3-215ENST00000487563 E7ENX8 843 aa22.48■■□□□ 1.19
PLOD3-215ENST00000487563 MAP2K7O14733 419 aa22.48■■□□□ 1.19
PLOD3-215ENST00000487563 HAUS5O94927 633 aa22.48■■□□□ 1.19
PLOD3-215ENST00000487563 ACPPP15309 386 aa22.48■■□□□ 1.19
PLOD3-215ENST00000487563 EMP3P54852 163 aa22.48■■□□□ 1.19
PLOD3-215ENST00000487563 TAP2Q03519 686 aa22.48■■□□□ 1.19
PLOD3-215ENST00000487563 MRPL49Q13405 166 aaKnown RBP22.48■■□□□ 1.19
PLOD3-215ENST00000487563 RNASEH2BQ5TBB1 312 aaKnown RBP22.48■■□□□ 1.19
PLOD3-215ENST00000487563 PIWIL4Q7Z3Z4 852 aaKnown RBP22.48■■□□□ 1.19
PLOD3-215ENST00000487563 OR11G2Q8NGC1 345 aa22.48■■□□□ 1.19
PLOD3-215ENST00000487563 C19orf60Q96EN9 201 aa22.48■■□□□ 1.19
PLOD3-215ENST00000487563 MVB12AQ96EY5 273 aa22.48■■□□□ 1.19
PLOD3-215ENST00000487563 EBNA1BP2Q99848 306 aaKnown RBP22.48■■□□□ 1.19
PLOD3-215ENST00000487563 WDR77Q9BQA1 342 aaPredicted RBP22.48■■□□□ 1.19
PLOD3-215ENST00000487563 AARSD1Q9BTE6 412 aaKnown RBP22.48■■□□□ 1.19
PLOD3-215ENST00000487563 LHPPQ9H008 270 aa22.48■■□□□ 1.19
PLOD3-215ENST00000487563 ZBTB20Q9HC78 741 aaPredicted RBP22.48■■□□□ 1.19
PLOD3-215ENST00000487563 TRPC4Q9UBN4 977 aa22.48■■□□□ 1.19
PLOD3-215ENST00000487563 SNX12Q9UMY4 172 aa22.48■■□□□ 1.19
PLOD3-215ENST00000487563 MAST4O15021 2626 aa22.48■■□□□ 1.19
PLOD3-215ENST00000487563 GFYI3L273 518 aa22.47■■□□□ 1.19
PLOD3-215ENST00000487563 TXNDC9O14530 226 aa22.47■■□□□ 1.19
PLOD3-215ENST00000487563 ANXA5P08758 320 aa22.47■■□□□ 1.19
PLOD3-215ENST00000487563 GLRBP48167 497 aa22.47■■□□□ 1.19
PLOD3-215ENST00000487563 DSG2Q14126 1118 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms