RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 CDC14AQ9UNH5 594 aa18.49■□□□□ 0.55
SMPDL3A-202ENST00000487215 TCAF1Q9Y4C2 921 aa18.49■□□□□ 0.55
SMPDL3A-202ENST00000487215 TCRBV7S2A1N4TA0A589 114 aa18.48■□□□□ 0.55
SMPDL3A-202ENST00000487215 GRID2IPA4D2P6 1211 aa18.48■□□□□ 0.55
SMPDL3A-202ENST00000487215 H0YGG7 62 aa18.48■□□□□ 0.55
SMPDL3A-202ENST00000487215 SUN1O94901 812 aa18.48■□□□□ 0.55
SMPDL3A-202ENST00000487215 IPO7O95373 1038 aaKnown RBP18.48■□□□□ 0.55
SMPDL3A-202ENST00000487215 ITGAMP11215 1152 aa18.48■□□□□ 0.55
SMPDL3A-202ENST00000487215 EMP3P54852 163 aa18.48■□□□□ 0.55
SMPDL3A-202ENST00000487215 ARF3P61204 181 aaPredicted RBP18.48■□□□□ 0.55
SMPDL3A-202ENST00000487215 FASTKQ14296 549 aaKnown RBP18.48■□□□□ 0.55
SMPDL3A-202ENST00000487215 PCOLCEQ15113 449 aa18.48■□□□□ 0.55
SMPDL3A-202ENST00000487215 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.48■□□□□ 0.55
SMPDL3A-202ENST00000487215 MVB12AQ96EY5 273 aa18.48■□□□□ 0.55
SMPDL3A-202ENST00000487215 PANX3Q96QZ0 392 aa18.48■□□□□ 0.55
SMPDL3A-202ENST00000487215 DPH7Q9BTV6 452 aa18.48■□□□□ 0.55
SMPDL3A-202ENST00000487215 TRIM8Q9BZR9 551 aa18.48■□□□□ 0.55
SMPDL3A-202ENST00000487215 P2RY12Q9H244 342 aa18.48■□□□□ 0.55
SMPDL3A-202ENST00000487215 CATSPERZQ9NTU4 200 aa18.48■□□□□ 0.55
SMPDL3A-202ENST00000487215 C14orf105Q9NVL8 296 aa18.48■□□□□ 0.55
SMPDL3A-202ENST00000487215 ANAPC5Q9UJX4 755 aa18.48■□□□□ 0.55
SMPDL3A-202ENST00000487215 MRFAP1Q9Y605 127 aa18.48■□□□□ 0.55
SMPDL3A-202ENST00000487215 ADGRG4Q8IZF6 3080 aa18.47■□□□□ 0.55
SMPDL3A-202ENST00000487215 AKAP9Q99996 3911 aa18.47■□□□□ 0.55
SMPDL3A-202ENST00000487215 LOC102723996A0A087X1L8 192 aa18.47■□□□□ 0.55
SMPDL3A-202ENST00000487215 BTNL10A8MVZ5 291 aa18.47■□□□□ 0.55
SMPDL3A-202ENST00000487215 PRPF4O43172 522 aaKnown RBP eCLIP18.47■□□□□ 0.55
SMPDL3A-202ENST00000487215 PRAMEF2O60811 474 aa18.47■□□□□ 0.55
SMPDL3A-202ENST00000487215 HEXBP07686 556 aa18.47■□□□□ 0.55
SMPDL3A-202ENST00000487215 CMPK1P30085 196 aa18.47■□□□□ 0.55
SMPDL3A-202ENST00000487215 PMP22Q01453 160 aa18.47■□□□□ 0.55
SMPDL3A-202ENST00000487215 AMER3Q8N944 861 aa18.47■□□□□ 0.55
SMPDL3A-202ENST00000487215 SUN3Q8TAQ9 357 aa18.47■□□□□ 0.55
SMPDL3A-202ENST00000487215 PEX13Q92968 403 aa18.47■□□□□ 0.55
SMPDL3A-202ENST00000487215 MRFAP1L1Q96HT8 127 aa18.47■□□□□ 0.55
SMPDL3A-202ENST00000487215 ACAT2Q9BWD1 397 aa18.47■□□□□ 0.55
SMPDL3A-202ENST00000487215 LACRTQ9GZZ8 138 aa18.47■□□□□ 0.55
SMPDL3A-202ENST00000487215 ZNF700Q9H0M5 742 aa18.47■□□□□ 0.55
SMPDL3A-202ENST00000487215 SPATA7Q9P0W8 599 aa18.47■□□□□ 0.55
SMPDL3A-202ENST00000487215 GNPTGQ9UJJ9 305 aa18.47■□□□□ 0.55
SMPDL3A-202ENST00000487215 RUVBL1Q9Y265 456 aaKnown RBP18.47■□□□□ 0.55
SMPDL3A-202ENST00000487215 EPN1Q9Y6I3 576 aaPredicted RBP18.47■□□□□ 0.55
SMPDL3A-202ENST00000487215 CPAMD8Q8IZJ3 1885 aa18.47■□□□□ 0.55
SMPDL3A-202ENST00000487215 MYO7BQ6PIF6 2116 aa18.47■□□□□ 0.55
SMPDL3A-202ENST00000487215 F8P00451 2351 aa18.46■□□□□ 0.55
SMPDL3A-202ENST00000487215 A0A0U1RQJ8 604 aa18.46■□□□□ 0.55
SMPDL3A-202ENST00000487215 OR5H15A6NDH6 313 aa18.46■□□□□ 0.55
SMPDL3A-202ENST00000487215 SOWAHDA6NJG2 315 aa18.46■□□□□ 0.55
SMPDL3A-202ENST00000487215 WISP2O76076 250 aa18.46■□□□□ 0.55
SMPDL3A-202ENST00000487215 SLC26A3P40879 764 aa18.46■□□□□ 0.55
SMPDL3A-202ENST00000487215 CCNFP41002 786 aa18.46■□□□□ 0.55
SMPDL3A-202ENST00000487215 TTPAP49638 278 aa18.46■□□□□ 0.55
SMPDL3A-202ENST00000487215 EFNA3P52797 238 aa18.46■□□□□ 0.55
SMPDL3A-202ENST00000487215 ADORA2A-AS1P86434 159 aa18.46■□□□□ 0.55
SMPDL3A-202ENST00000487215 RBPJQ06330 500 aa18.46■□□□□ 0.55
SMPDL3A-202ENST00000487215 NAA25Q14CX7 972 aa18.46■□□□□ 0.55
SMPDL3A-202ENST00000487215 HKDC1Q2TB90 917 aa18.46■□□□□ 0.55
SMPDL3A-202ENST00000487215 ABHD17BQ5VST6 288 aa18.46■□□□□ 0.55
SMPDL3A-202ENST00000487215 OTOAQ7RTW8 1153 aa18.46■□□□□ 0.55
SMPDL3A-202ENST00000487215 CSNK1A1LQ8N752 337 aa18.46■□□□□ 0.55
SMPDL3A-202ENST00000487215 ATG4AQ8WYN0 398 aa18.46■□□□□ 0.55
SMPDL3A-202ENST00000487215 MMABQ96EY8 250 aaPredicted RBP18.46■□□□□ 0.55
SMPDL3A-202ENST00000487215 FOPNLQ96NB1 174 aa18.46■□□□□ 0.55
SMPDL3A-202ENST00000487215 TGIF2Q9GZN2 237 aa18.46■□□□□ 0.55
SMPDL3A-202ENST00000487215 MKKSQ9NPJ1 570 aaPredicted RBP18.46■□□□□ 0.55
SMPDL3A-202ENST00000487215 PACSIN2Q9UNF0 486 aaPredicted RBP18.46■□□□□ 0.55
SMPDL3A-202ENST00000487215 REXO2Q9Y3B8 237 aaKnown RBP18.46■□□□□ 0.55
SMPDL3A-202ENST00000487215 KPNA5O15131 536 aa18.45■□□□□ 0.54
SMPDL3A-202ENST00000487215 CD3EAPO15446 510 aaKnown RBP18.45■□□□□ 0.54
SMPDL3A-202ENST00000487215 SLC19A2O60779 497 aa18.45■□□□□ 0.54
SMPDL3A-202ENST00000487215 VPS26AO75436 327 aa18.45■□□□□ 0.54
SMPDL3A-202ENST00000487215 FDFT1P37268 417 aa18.45■□□□□ 0.54
SMPDL3A-202ENST00000487215 AP2B1P63010 937 aa18.45■□□□□ 0.54
SMPDL3A-202ENST00000487215 XKRXQ6PP77 449 aa18.45■□□□□ 0.54
SMPDL3A-202ENST00000487215 TMEM205Q6UW68 189 aa18.45■□□□□ 0.54
SMPDL3A-202ENST00000487215 NEK10Q6ZWH5 1172 aa18.45■□□□□ 0.54
SMPDL3A-202ENST00000487215 PAQR7Q86WK9 346 aa18.45■□□□□ 0.54
SMPDL3A-202ENST00000487215 ZC3H7AQ8IWR0 971 aaKnown RBP18.45■□□□□ 0.54
SMPDL3A-202ENST00000487215 ZNF295-AS1Q8N0V1 137 aa18.45■□□□□ 0.54
SMPDL3A-202ENST00000487215 UBL4BQ8N7F7 174 aa18.45■□□□□ 0.54
SMPDL3A-202ENST00000487215 PPHLN1Q8NEY8 458 aaKnown RBP18.45■□□□□ 0.54
SMPDL3A-202ENST00000487215 MAGEC3Q8TD91 643 aa18.45■□□□□ 0.54
SMPDL3A-202ENST00000487215 IMMP1LQ96LU5 166 aa18.45■□□□□ 0.54
SMPDL3A-202ENST00000487215 PLCD4Q9BRC7 762 aa18.45■□□□□ 0.54
SMPDL3A-202ENST00000487215 TSR3Q9UJK0 312 aaKnown RBP18.45■□□□□ 0.54
SMPDL3A-202ENST00000487215 ITGB1BP2Q9UKP3 347 aa18.45■□□□□ 0.54
SMPDL3A-202ENST00000487215 AMFRQ9UKV5 643 aa18.45■□□□□ 0.54
SMPDL3A-202ENST00000487215 C2CD3Q4AC94 2353 aa18.44■□□□□ 0.54
SMPDL3A-202ENST00000487215 IGKV1-8A0A0C4DH67 115 aa18.44■□□□□ 0.54
SMPDL3A-202ENST00000487215 E7EVH7 732 aa18.44■□□□□ 0.54
SMPDL3A-202ENST00000487215 FOXS1O43638 330 aa18.44■□□□□ 0.54
SMPDL3A-202ENST00000487215 PHF2O75151 1096 aa18.44■□□□□ 0.54
SMPDL3A-202ENST00000487215 ANXA5P08758 320 aa18.44■□□□□ 0.54
SMPDL3A-202ENST00000487215 ERGP11308 486 aa18.44■□□□□ 0.54
SMPDL3A-202ENST00000487215 ICAM2P13598 275 aa18.44■□□□□ 0.54
SMPDL3A-202ENST00000487215 RPS3P23396 243 aaKnown RBP eCLIP18.44■□□□□ 0.54
SMPDL3A-202ENST00000487215 CASP6P55212 293 aa18.44■□□□□ 0.54
SMPDL3A-202ENST00000487215 ZNF33BQ06732 778 aa18.44■□□□□ 0.54
SMPDL3A-202ENST00000487215 C3AR1Q16581 482 aa18.44■□□□□ 0.54
SMPDL3A-202ENST00000487215 SYT16Q17RD7 645 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms