RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 TAF4O00268 1085 aa14.05□□□□□ -0.16
LIMS3-205ENST00000487150 ALDOAP04075 364 aaKnown RBP14.05□□□□□ -0.16
LIMS3-205ENST00000487150 CD63P08962 238 aa14.05□□□□□ -0.16
LIMS3-205ENST00000487150 MYBL2P10244 700 aa14.05□□□□□ -0.16
LIMS3-205ENST00000487150 TFEBP19484 476 aa14.05□□□□□ -0.16
LIMS3-205ENST00000487150 STAT5AP42229 794 aa14.05□□□□□ -0.16
LIMS3-205ENST00000487150 MAGEA12P43365 314 aa14.05□□□□□ -0.16
LIMS3-205ENST00000487150 RPS15AP62244 130 aaKnown RBP14.05□□□□□ -0.16
LIMS3-205ENST00000487150 VSNL1P62760 191 aa14.05□□□□□ -0.16
LIMS3-205ENST00000487150 ZNF425Q6IV72 752 aa14.05□□□□□ -0.16
LIMS3-205ENST00000487150 ADGRD1Q6QNK2 874 aa14.05□□□□□ -0.16
LIMS3-205ENST00000487150 MBOAT1Q6ZNC8 495 aa14.05□□□□□ -0.16
LIMS3-205ENST00000487150 TIFABQ6ZNK6 161 aa14.05□□□□□ -0.16
LIMS3-205ENST00000487150 ZNF655Q8N720 491 aaPredicted RBP14.05□□□□□ -0.16
LIMS3-205ENST00000487150 PDPRQ8NCN5 879 aa14.05□□□□□ -0.16
LIMS3-205ENST00000487150 OR1L3Q8NH93 324 aa14.05□□□□□ -0.16
LIMS3-205ENST00000487150 ACMSDQ8TDX5 336 aa14.05□□□□□ -0.16
LIMS3-205ENST00000487150 NKD1Q969G9 470 aa14.05□□□□□ -0.16
LIMS3-205ENST00000487150 CLIP3Q96DZ5 547 aa14.05□□□□□ -0.16
LIMS3-205ENST00000487150 SPRY4Q9C004 299 aa14.05□□□□□ -0.16
LIMS3-205ENST00000487150 ATG10Q9H0Y0 220 aa14.05□□□□□ -0.16
LIMS3-205ENST00000487150 VPS11Q9H270 941 aa14.05□□□□□ -0.16
LIMS3-205ENST00000487150 FAM60AQ9NP50 221 aa14.05□□□□□ -0.16
LIMS3-205ENST00000487150 SLC6A20Q9NP91 592 aa14.05□□□□□ -0.16
LIMS3-205ENST00000487150 TXLNGQ9NUQ3 528 aa14.05□□□□□ -0.16
LIMS3-205ENST00000487150 WDR70Q9NW82 654 aa14.05□□□□□ -0.16
LIMS3-205ENST00000487150 CD274Q9NZQ7 290 aa14.05□□□□□ -0.16
LIMS3-205ENST00000487150 KCND3Q9UK17 655 aa14.05□□□□□ -0.16
LIMS3-205ENST00000487150 TRIM49D1C9J1S8 452 aa14.04□□□□□ -0.16
LIMS3-205ENST00000487150 C9J4A7 227 aa14.04□□□□□ -0.16
LIMS3-205ENST00000487150 KLHL2O95198 593 aa14.04□□□□□ -0.16
LIMS3-205ENST00000487150 RBP1P09455 135 aa14.04□□□□□ -0.16
LIMS3-205ENST00000487150 AGXTP21549 392 aa14.04□□□□□ -0.16
LIMS3-205ENST00000487150 GABRA4P48169 554 aa14.04□□□□□ -0.16
LIMS3-205ENST00000487150 CSRP3P50461 194 aa14.04□□□□□ -0.16
LIMS3-205ENST00000487150 CCR8P51685 355 aa14.04□□□□□ -0.16
LIMS3-205ENST00000487150 PGGT1BP53609 377 aa14.04□□□□□ -0.16
LIMS3-205ENST00000487150 EMP3P54852 163 aa14.04□□□□□ -0.16
LIMS3-205ENST00000487150 MC1RQ01726 317 aa14.04□□□□□ -0.16
LIMS3-205ENST00000487150 DEFB110Q30KQ9 67 aa14.04□□□□□ -0.16
LIMS3-205ENST00000487150 FAM214AQ32MH5 1076 aa14.04□□□□□ -0.16
LIMS3-205ENST00000487150 PTCHD3Q3KNS1 767 aa14.04□□□□□ -0.16
LIMS3-205ENST00000487150 FCRL6Q6DN72 434 aa14.04□□□□□ -0.16
LIMS3-205ENST00000487150 RHBDD2Q6NTF9 364 aa14.04□□□□□ -0.16
LIMS3-205ENST00000487150 METTL2BQ6P1Q9 378 aaKnown RBP14.04□□□□□ -0.16
LIMS3-205ENST00000487150 PAQR7Q86WK9 346 aa14.04□□□□□ -0.16
LIMS3-205ENST00000487150 TDRPQ86YL5 185 aa14.04□□□□□ -0.16
LIMS3-205ENST00000487150 KLHDC8AQ8IYD2 350 aa14.04□□□□□ -0.16
LIMS3-205ENST00000487150 RIBC1Q8N443 379 aaPredicted RBP14.04□□□□□ -0.16
LIMS3-205ENST00000487150 ABHD11Q8NFV4 315 aa14.04□□□□□ -0.16
LIMS3-205ENST00000487150 CAVIN3Q969G5 261 aa14.04□□□□□ -0.16
LIMS3-205ENST00000487150 ALKBH8Q96BT7 664 aaKnown RBP14.04□□□□□ -0.16
LIMS3-205ENST00000487150 RHBDF1Q96CC6 855 aa14.04□□□□□ -0.16
LIMS3-205ENST00000487150 ZNF285Q96NJ3 590 aa14.04□□□□□ -0.16
LIMS3-205ENST00000487150 ALG9Q9H6U8 611 aa14.04□□□□□ -0.16
LIMS3-205ENST00000487150 GPN2Q9H9Y4 310 aaPredicted RBP14.04□□□□□ -0.16
LIMS3-205ENST00000487150 IGSF5Q9NSI5 407 aa14.04□□□□□ -0.16
LIMS3-205ENST00000487150 ABCF3Q9NUQ8 709 aa14.04□□□□□ -0.16
LIMS3-205ENST00000487150 GPRC5BQ9NZH0 403 aa14.04□□□□□ -0.16
LIMS3-205ENST00000487150 FRYQ5TBA9 3013 aa14.03□□□□□ -0.16
LIMS3-205ENST00000487150 HMX2A2RU54 273 aa14.03□□□□□ -0.16
LIMS3-205ENST00000487150 SUPT3HB4E1H0 165 aa14.03□□□□□ -0.16
LIMS3-205ENST00000487150 ZNF749O43361 778 aa14.03□□□□□ -0.16
LIMS3-205ENST00000487150 CDH16O75309 829 aa14.03□□□□□ -0.16
LIMS3-205ENST00000487150 SUPT3HO75486 399 aa14.03□□□□□ -0.16
LIMS3-205ENST00000487150 PIM1P11309 404 aaPredicted RBP14.03□□□□□ -0.16
LIMS3-205ENST00000487150 GNAZP19086 355 aa14.03□□□□□ -0.16
LIMS3-205ENST00000487150 GSTM2P28161 218 aa14.03□□□□□ -0.16
LIMS3-205ENST00000487150 GGT5P36269 586 aa14.03□□□□□ -0.16
LIMS3-205ENST00000487150 UBAP2Q5T6F2 1119 aaKnown RBP14.03□□□□□ -0.16
LIMS3-205ENST00000487150 GARNL3Q5VVW2 1013 aa14.03□□□□□ -0.16
LIMS3-205ENST00000487150 CCDC81Q6ZN84 652 aa14.03□□□□□ -0.16
LIMS3-205ENST00000487150 LRRC70Q7Z2Q7 622 aa14.03□□□□□ -0.16
LIMS3-205ENST00000487150 ISCA2Q86U28 154 aa14.03□□□□□ -0.16
LIMS3-205ENST00000487150 FAM20CQ8IXL6 584 aa14.03□□□□□ -0.16
LIMS3-205ENST00000487150 CENPLQ8N0S6 344 aaPredicted RBP14.03□□□□□ -0.16
LIMS3-205ENST00000487150 SPATA6LQ8N4H0 392 aa14.03□□□□□ -0.16
LIMS3-205ENST00000487150 GALNT6Q8NCL4 622 aa14.03□□□□□ -0.16
LIMS3-205ENST00000487150 AENQ8WTP8 325 aaKnown RBP14.03□□□□□ -0.16
LIMS3-205ENST00000487150 KCTD4Q8WVF5 259 aa14.03□□□□□ -0.16
LIMS3-205ENST00000487150 SLC5A11Q8WWX8 675 aa14.03□□□□□ -0.16
LIMS3-205ENST00000487150 PTERQ96BW5 349 aa14.03□□□□□ -0.16
LIMS3-205ENST00000487150 GPR87Q9BY21 358 aa14.03□□□□□ -0.16
LIMS3-205ENST00000487150 PITHD1Q9GZP4 211 aaPredicted RBP14.03□□□□□ -0.16
LIMS3-205ENST00000487150 PELI2Q9HAT8 420 aa14.03□□□□□ -0.16
LIMS3-205ENST00000487150 LHX9Q9NQ69 397 aa14.03□□□□□ -0.16
LIMS3-205ENST00000487150 PADI2Q9Y2J8 665 aa14.03□□□□□ -0.16
LIMS3-205ENST00000487150 SSUH2Q9Y2M2 353 aa14.03□□□□□ -0.16
LIMS3-205ENST00000487150 KLHL20Q9Y2M5 609 aa14.03□□□□□ -0.16
LIMS3-205ENST00000487150 KCNE1BA0A087WTH5 132 aa14.02□□□□□ -0.17
LIMS3-205ENST00000487150 A0A0J9YVX5 310 aa14.02□□□□□ -0.17
LIMS3-205ENST00000487150 A0A1B0GX78 115 aa14.02□□□□□ -0.17
LIMS3-205ENST00000487150 FITM1A5D6W6 292 aa14.02□□□□□ -0.17
LIMS3-205ENST00000487150 NCF1BA6NI72 391 aaPredicted RBP14.02□□□□□ -0.17
LIMS3-205ENST00000487150 NCF1CA8MVU1 366 aaPredicted RBP14.02□□□□□ -0.17
LIMS3-205ENST00000487150 MEN1O00255 615 aa14.02□□□□□ -0.17
LIMS3-205ENST00000487150 PRPF4O43172 522 aaKnown RBP eCLIP14.02□□□□□ -0.17
LIMS3-205ENST00000487150 CTSVO60911 334 aa14.02□□□□□ -0.17
LIMS3-205ENST00000487150 STK16O75716 305 aa14.02□□□□□ -0.17
LIMS3-205ENST00000487150 WDR47O94967 919 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms