RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 NDOR1Q9UHB4 597 aa18.7■□□□□ 0.58
SNX5-213ENST00000486039 GPN3Q9UHW5 284 aaPredicted RBP18.7■□□□□ 0.58
SNX5-213ENST00000486039 ANAPC2Q9UJX6 822 aa18.7■□□□□ 0.58
SNX5-213ENST00000486039 CORO1CQ9ULV4 474 aaPredicted RBP18.7■□□□□ 0.58
SNX5-213ENST00000486039 PADI2Q9Y2J8 665 aa18.7■□□□□ 0.58
SNX5-213ENST00000486039 MKRN2OSH3BPM6 223 aa18.69■□□□□ 0.58
SNX5-213ENST00000486039 DSCR3O14972 297 aa18.69■□□□□ 0.58
SNX5-213ENST00000486039 SLC16A5O15375 505 aa18.69■□□□□ 0.58
SNX5-213ENST00000486039 ONECUT2O95948 504 aa18.69■□□□□ 0.58
SNX5-213ENST00000486039 C8GP07360 202 aa18.69■□□□□ 0.58
SNX5-213ENST00000486039 NR1D1P20393 614 aa18.69■□□□□ 0.58
SNX5-213ENST00000486039 CALCOCO2Q13137 446 aa18.69■□□□□ 0.58
SNX5-213ENST00000486039 SP140Q13342 867 aa18.69■□□□□ 0.58
SNX5-213ENST00000486039 PDAP1Q13442 181 aaKnown RBP18.69■□□□□ 0.58
SNX5-213ENST00000486039 FAM45BPQ6NSW5 357 aa18.69■□□□□ 0.58
SNX5-213ENST00000486039 MBOAT1Q6ZNC8 495 aa18.69■□□□□ 0.58
SNX5-213ENST00000486039 ZNF572Q7Z3I7 529 aaPredicted RBP18.69■□□□□ 0.58
SNX5-213ENST00000486039 MYO1HQ8N1T3 1032 aa18.69■□□□□ 0.58
SNX5-213ENST00000486039 FAM45AQ8TCE6 357 aa18.69■□□□□ 0.58
SNX5-213ENST00000486039 MCOLN3Q8TDD5 553 aa18.69■□□□□ 0.58
SNX5-213ENST00000486039 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.69■□□□□ 0.58
SNX5-213ENST00000486039 CCDC138Q96M89 665 aa18.69■□□□□ 0.58
SNX5-213ENST00000486039 ING2Q9H160 280 aa18.69■□□□□ 0.58
SNX5-213ENST00000486039 EPN3Q9H201 632 aa18.69■□□□□ 0.58
SNX5-213ENST00000486039 PARVBQ9HBI1 364 aa18.69■□□□□ 0.58
SNX5-213ENST00000486039 SMYD2Q9NRG4 433 aa18.69■□□□□ 0.58
SNX5-213ENST00000486039 ZFATQ9P243 1243 aa18.69■□□□□ 0.58
SNX5-213ENST00000486039 TP53TG5Q9Y2B4 290 aa18.69■□□□□ 0.58
SNX5-213ENST00000486039 PTRH2Q9Y3E5 179 aaKnown RBP18.69■□□□□ 0.58
SNX5-213ENST00000486039 PCSK5Q92824 1860 aa18.69■□□□□ 0.58
SNX5-213ENST00000486039 HYKKA2RU49 373 aa18.68■□□□□ 0.58
SNX5-213ENST00000486039 H0YGG7 62 aa18.68■□□□□ 0.58
SNX5-213ENST00000486039 CCNDBP1O95273 360 aa18.68■□□□□ 0.58
SNX5-213ENST00000486039 EIF2S1P05198 315 aaKnown RBP18.68■□□□□ 0.58
SNX5-213ENST00000486039 CASRP41180 1078 aa18.68■□□□□ 0.58
SNX5-213ENST00000486039 IL2P60568 153 aa18.68■□□□□ 0.58
SNX5-213ENST00000486039 ARF3P61204 181 aaPredicted RBP18.68■□□□□ 0.58
SNX5-213ENST00000486039 SSPNQ14714 243 aa18.68■□□□□ 0.58
SNX5-213ENST00000486039 PHKG1Q16816 387 aa18.68■□□□□ 0.58
SNX5-213ENST00000486039 FAM214AQ32MH5 1076 aa18.68■□□□□ 0.58
SNX5-213ENST00000486039 LACTB2Q53H82 288 aaPredicted RBP18.68■□□□□ 0.58
SNX5-213ENST00000486039 TCTN3Q6NUS6 607 aa18.68■□□□□ 0.58
SNX5-213ENST00000486039 TMEM207Q6UWW9 146 aa18.68■□□□□ 0.58
SNX5-213ENST00000486039 CAPN12Q6ZSI9 719 aa18.68■□□□□ 0.58
SNX5-213ENST00000486039 COX15Q7KZN9 410 aa18.68■□□□□ 0.58
SNX5-213ENST00000486039 STRA8Q7Z7C7 330 aa18.68■□□□□ 0.58
SNX5-213ENST00000486039 ZC3HC1Q86WB0 502 aaKnown RBP18.68■□□□□ 0.58
SNX5-213ENST00000486039 METTL27Q8N6F8 245 aaPredicted RBP18.68■□□□□ 0.58
SNX5-213ENST00000486039 OR2Y1Q8NGV0 311 aa18.68■□□□□ 0.58
SNX5-213ENST00000486039 SAYSD1Q9NPB0 183 aa18.68■□□□□ 0.58
SNX5-213ENST00000486039 ACSS2Q9NR19 701 aa18.68■□□□□ 0.58
SNX5-213ENST00000486039 CUEDC1Q9NWM3 386 aaPredicted RBP18.68■□□□□ 0.58
SNX5-213ENST00000486039 PIAS1O75925 651 aa18.67■□□□□ 0.58
SNX5-213ENST00000486039 PDGFAP04085 211 aa18.67■□□□□ 0.58
SNX5-213ENST00000486039 UMODP07911 640 aa18.67■□□□□ 0.58
SNX5-213ENST00000486039 CD63P08962 238 aa18.67■□□□□ 0.58
SNX5-213ENST00000486039 SSTR1P30872 391 aa18.67■□□□□ 0.58
SNX5-213ENST00000486039 OTX2P32243 289 aa18.67■□□□□ 0.58
SNX5-213ENST00000486039 FOLR3P41439 243 aa18.67■□□□□ 0.58
SNX5-213ENST00000486039 OR1D4P47884 311 aa18.67■□□□□ 0.58
SNX5-213ENST00000486039 CCL11P51671 97 aa18.67■□□□□ 0.58
SNX5-213ENST00000486039 TBPL1P62380 186 aa18.67■□□□□ 0.58
SNX5-213ENST00000486039 ABATP80404 500 aa18.67■□□□□ 0.58
SNX5-213ENST00000486039 ATP1A4Q13733 1029 aa18.67■□□□□ 0.58
SNX5-213ENST00000486039 TRADDQ15628 312 aa18.67■□□□□ 0.58
SNX5-213ENST00000486039 PRTGQ2VWP7 1150 aa18.67■□□□□ 0.58
SNX5-213ENST00000486039 THEMIS2Q5TEJ8 643 aa18.67■□□□□ 0.58
SNX5-213ENST00000486039 OVCH1Q7RTY7 1134 aa18.67■□□□□ 0.58
SNX5-213ENST00000486039 SLC26A11Q86WA9 606 aa18.67■□□□□ 0.58
SNX5-213ENST00000486039 PALM2Q8IXS6 379 aa18.67■□□□□ 0.58
SNX5-213ENST00000486039 PYROXD1Q8WU10 500 aa18.67■□□□□ 0.58
SNX5-213ENST00000486039 OR2A5Q96R48 311 aa18.67■□□□□ 0.58
SNX5-213ENST00000486039 MCMBPQ9BTE3 642 aa18.67■□□□□ 0.58
SNX5-213ENST00000486039 ATG10Q9H0Y0 220 aa18.67■□□□□ 0.58
SNX5-213ENST00000486039 CCDC177Q9NQR7 707 aaPredicted RBP18.67■□□□□ 0.58
SNX5-213ENST00000486039 IKZF3Q9UKT9 509 aa18.67■□□□□ 0.58
SNX5-213ENST00000486039 H7BY64 318 aa18.66■□□□□ 0.58
SNX5-213ENST00000486039 EIF3HO15372 352 aaKnown RBP eCLIP18.66■□□□□ 0.58
SNX5-213ENST00000486039 ZXDCQ2QGD7 858 aaPredicted RBP18.66■□□□□ 0.58
SNX5-213ENST00000486039 PRAMEF13Q5VWM6 474 aa18.66■□□□□ 0.58
SNX5-213ENST00000486039 AGTRAPQ6RW13 159 aa18.66■□□□□ 0.58
SNX5-213ENST00000486039 RAB43Q86YS6 212 aa18.66■□□□□ 0.58
SNX5-213ENST00000486039 FKBP10Q96AY3 582 aa18.66■□□□□ 0.58
SNX5-213ENST00000486039 PTERQ96BW5 349 aa18.66■□□□□ 0.58
SNX5-213ENST00000486039 C10orf90Q96M02 699 aa18.66■□□□□ 0.58
SNX5-213ENST00000486039 C16orf45Q96MC5 204 aaPredicted RBP18.66■□□□□ 0.58
SNX5-213ENST00000486039 PRAP1Q96NZ9 151 aa18.66■□□□□ 0.58
SNX5-213ENST00000486039 SH2B3Q9UQQ2 575 aa18.66■□□□□ 0.58
SNX5-213ENST00000486039 UTP11Q9Y3A2 253 aaKnown RBP18.66■□□□□ 0.58
SNX5-213ENST00000486039 MAU2Q9Y6X3 613 aa18.66■□□□□ 0.58
SNX5-213ENST00000486039 FAM95CA0A1B0GW59 222 aa18.65■□□□□ 0.58
SNX5-213ENST00000486039 HAT1O14929 419 aa18.65■□□□□ 0.58
SNX5-213ENST00000486039 ALBP02768 609 aa18.65■□□□□ 0.58
SNX5-213ENST00000486039 PIM1P11309 404 aaPredicted RBP18.65■□□□□ 0.58
SNX5-213ENST00000486039 EZRP15311 586 aaKnown RBP18.65■□□□□ 0.58
SNX5-213ENST00000486039 SAT1P21673 171 aa18.65■□□□□ 0.58
SNX5-213ENST00000486039 PLTPP55058 493 aa18.65■□□□□ 0.58
SNX5-213ENST00000486039 RELAQ04206 551 aa18.65■□□□□ 0.58
SNX5-213ENST00000486039 NAE1Q13564 534 aa18.65■□□□□ 0.58
SNX5-213ENST00000486039 NKG7Q16617 165 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms