RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 FAM155BO75949 473 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 GSTA2P09210 222 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 ENO3P13929 434 aaPredicted RBP5.5□□□□□ -1.53
CUX1-208ENST00000485792 UGT2B7P16662 529 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 ALAS2P22557 587 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 FDXRP22570 491 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 MAP4P27816 1152 aaKnown RBP5.5□□□□□ -1.53
CUX1-208ENST00000485792 STAT5AP42229 794 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 MAPK10P53779 464 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 ARL4CP56559 192 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 TMPRSS3P57727 454 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 SLC7A5Q01650 507 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 CAV1Q03135 178 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 ACY1Q03154 408 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 TAP2Q03519 686 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 DLG1Q12959 904 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 PRKG2Q13237 762 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 GPR19Q15760 415 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 PHKG1Q16816 387 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 WHAMMP3Q1A5X7 153 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 KLHL38Q2WGJ6 581 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 LINC00303Q3SY05 128 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 GLE1Q53GS7 698 aaKnown RBP5.5□□□□□ -1.53
CUX1-208ENST00000485792 SOWAHCQ53LP3 525 aaPredicted RBP5.5□□□□□ -1.53
CUX1-208ENST00000485792 DNTTIP2Q5QJE6 756 aaKnown RBP5.5□□□□□ -1.53
CUX1-208ENST00000485792 SNAP47Q5SQN1 464 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 PRAMEF9Q5VWM5 478 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 FCRL6Q6DN72 434 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 PTRHD1Q6GMV3 140 aaKnown RBP5.5□□□□□ -1.53
CUX1-208ENST00000485792 ZNF425Q6IV72 752 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 PWWP2BQ6NUJ5 590 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 IRGCQ6NXR0 463 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 CASC4Q6P4E1 433 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 CDHR3Q6ZTQ4 885 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 CHSY3Q70JA7 882 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 PIWIL4Q7Z3Z4 852 aaKnown RBP5.5□□□□□ -1.53
CUX1-208ENST00000485792 TAX1BP1Q86VP1 789 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 SLC26A11Q86WA9 606 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 ZC3HC1Q86WB0 502 aaKnown RBP5.5□□□□□ -1.53
CUX1-208ENST00000485792 GSPT2Q8IYD1 628 aaKnown RBP5.5□□□□□ -1.53
CUX1-208ENST00000485792 ZBTB2Q8N680 514 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 FBXO36Q8NEA4 188 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 GSDMBQ8TAX9 411 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 FBXO25Q8TCJ0 367 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 ANKRD49Q8WVL7 239 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 HNRNPLLQ8WVV9 542 aaKnown RBP5.5□□□□□ -1.53
CUX1-208ENST00000485792 ZUFSPQ96AP4 578 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 RAD51AP1Q96B01 352 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 TCTN2Q96GX1 697 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 OR6C1Q96RD1 312 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 LRRC1Q9BTT6 524 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 SARGQ9BW04 601 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 RAB11FIP5Q9BXF6 653 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 FAM129AQ9BZQ8 928 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 AICDAQ9GZX7 198 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 DPH5Q9H2P9 285 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 SPNS1Q9H2V7 528 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 L2HGDHQ9H9P8 463 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 SLC22A11Q9NSA0 550 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 FGF21Q9NSA1 209 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 C20orf96Q9NUD7 363 aaPredicted RBP5.5□□□□□ -1.53
CUX1-208ENST00000485792 ACTR10Q9NZ32 417 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 AKAP7Q9P0M2 348 aaPredicted RBP5.5□□□□□ -1.53
CUX1-208ENST00000485792 SPATA7Q9P0W8 599 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 ZC3H7BQ9UGR2 993 aaKnown RBP5.5□□□□□ -1.53
CUX1-208ENST00000485792 IL17BQ9UHF5 180 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 MAD1L1Q9Y6D9 718 aa5.5□□□□□ -1.53
CUX1-208ENST00000485792 NUP214P35658 2090 aaPredicted RBP5.5□□□□□ -1.53
CUX1-208ENST00000485792 POLEQ07864 2286 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 A0A0J9YY10 115 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 TCRBV9S1A1TA0A576 114 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 OR2A25A4D2G3 310 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 K7EM74 188 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 SLC16A5O15375 505 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 P2RX6O15547 441 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 KLK10O43240 276 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 CTSVO60911 334 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 CPNE3O75131 537 aaKnown RBP5.49□□□□□ -1.53
CUX1-208ENST00000485792 STK17BO94768 372 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 SLC16A8O95907 504 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 RPN2P04844 631 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 ITGB2P05107 769 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 LIFP15018 202 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 GCAP28676 217 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 IMPA1P29218 277 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 SSTR1P30872 391 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 HSD17B2P37059 387 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 GRIA3P42263 894 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 GSK3AP49840 483 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 SEPHS1P49903 392 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 RPS18P62269 152 aaKnown RBP5.49□□□□□ -1.53
CUX1-208ENST00000485792 PRDX1Q06830 199 aaKnown RBP5.49□□□□□ -1.53
CUX1-208ENST00000485792 MGAT5Q09328 741 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 PDIA2Q13087 525 aaKnown RBP5.49□□□□□ -1.53
CUX1-208ENST00000485792 GPS2Q13227 327 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 BIRC2Q13490 618 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 IL10RAQ13651 578 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 THOC5Q13769 683 aaKnown RBP5.49□□□□□ -1.53
CUX1-208ENST00000485792 E2F2Q14209 437 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 PLCL1Q15111 1095 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms