RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 DSG2Q14126 1118 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 ZNF630Q2M218 657 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-227ENST00000485102 VWA2Q5GFL6 755 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 GARNL3Q5VVW2 1013 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 RPTNQ6XPR3 784 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 BNC2Q6ZN30 1099 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-227ENST00000485102 TAX1BP1Q86VP1 789 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 LRRC6Q86X45 466 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 DTWD1Q8N5C7 304 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 METTL27Q8N6F8 245 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-227ENST00000485102 BRIX1Q8TDN6 353 aaKnown RBP12.39□□□□□ -0.43
HDAC6-227ENST00000485102 C8orf44Q96CB5 159 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 C10orf90Q96M02 699 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 ZFYVE21Q9BQ24 234 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 FRMD8P1Q9BZ68 369 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-227ENST00000485102 LACRTQ9GZZ8 138 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 ETNK1Q9HBU6 452 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 LZTFL1Q9NQ48 299 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 RIC8BQ9NVN3 520 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 SPATA7Q9P0W8 599 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 PTGFRNQ9P2B2 879 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 SUCOQ9UBS9 1254 aaKnown RBP12.39□□□□□ -0.43
HDAC6-227ENST00000485102 ANAPC5Q9UJX4 755 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 R3HDM2Q9Y2K5 976 aaKnown RBP12.39□□□□□ -0.43
HDAC6-227ENST00000485102 TCAF1Q9Y4C2 921 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 NCOA6Q14686 2063 aaPredicted RBP12.39□□□□□ -0.43
HDAC6-227ENST00000485102 ADGRG4Q8IZF6 3080 aa12.39□□□□□ -0.43
HDAC6-227ENST00000485102 GTF3C1Q12789 2109 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 A0A0J9YVX5 310 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 MATN4O95460 622 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 AGAP20933 346 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 FBLP22087 321 aaKnown RBP12.38□□□□□ -0.43
HDAC6-227ENST00000485102 SLC26A3P40879 764 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 GRIA1P42261 906 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 KCNK10P57789 538 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 GBX1Q14549 363 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 OASLQ15646 514 aaKnown RBP12.38□□□□□ -0.43
HDAC6-227ENST00000485102 ZXDCQ2QGD7 858 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-227ENST00000485102 XKRXQ6PP77 449 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 TMEM205Q6UW68 189 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 TMEM207Q6UWW9 146 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 GFRALQ6UXV0 394 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 GDF7Q7Z4P5 450 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 KRT222Q8N1A0 295 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 ARHGEF39Q8N4T4 335 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 GSDMBQ8TAX9 411 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 CCDC120Q96HB5 630 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 IMMP1LQ96LU5 166 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 FOPNLQ96NB1 174 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 MIPEPQ99797 713 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 ZNF700Q9H0M5 742 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 MKKSQ9NPJ1 570 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-227ENST00000485102 CATSPERZQ9NTU4 200 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 PLA2G3Q9NZ20 509 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 CIDEBQ9UHD4 219 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 GNPTGQ9UJJ9 305 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 TTC7AQ9ULT0 858 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-227ENST00000485102 JRKLQ9Y4A0 524 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 PCDHGB6Q9Y5F9 930 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 NFS1Q9Y697 457 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 CACNA1CQ13936 2221 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 ZFHX3Q15911 3703 aa12.38□□□□□ -0.43
HDAC6-227ENST00000485102 HIVEP1P15822 2718 aa12.37□□□□□ -0.43
HDAC6-227ENST00000485102 H0YGG7 62 aa12.37□□□□□ -0.43
HDAC6-227ENST00000485102 KIF2AO00139 706 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-227ENST00000485102 TXNDC9O14530 226 aa12.37□□□□□ -0.43
HDAC6-227ENST00000485102 CD3EAPO15446 510 aaKnown RBP12.37□□□□□ -0.43
HDAC6-227ENST00000485102 WFS1O76024 890 aa12.37□□□□□ -0.43
HDAC6-227ENST00000485102 WDPCPO95876 746 aa12.37□□□□□ -0.43
HDAC6-227ENST00000485102 CYC1P08574 325 aa12.37□□□□□ -0.43
HDAC6-227ENST00000485102 PSMB5P28074 263 aa12.37□□□□□ -0.43
HDAC6-227ENST00000485102 GRNP28799 593 aaKnown RBP12.37□□□□□ -0.43
HDAC6-227ENST00000485102 ATP5DP30049 168 aa12.37□□□□□ -0.43
HDAC6-227ENST00000485102 CMPK1P30085 196 aa12.37□□□□□ -0.43
HDAC6-227ENST00000485102 ADARP55265 1226 aaKnown RBP12.37□□□□□ -0.43
HDAC6-227ENST00000485102 ARF3P61204 181 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-227ENST00000485102 FAM53BQ14153 422 aa12.37□□□□□ -0.43
HDAC6-227ENST00000485102 ARHGAP19Q14CB8 494 aa12.37□□□□□ -0.43
HDAC6-227ENST00000485102 CCSMST1Q4G0I0 132 aa12.37□□□□□ -0.43
HDAC6-227ENST00000485102 PCID2Q5JVF3 399 aa12.37□□□□□ -0.43
HDAC6-227ENST00000485102 PTRHD1Q6GMV3 140 aaKnown RBP12.37□□□□□ -0.43
HDAC6-227ENST00000485102 CNSTQ6PJW8 725 aa12.37□□□□□ -0.43
HDAC6-227ENST00000485102 PPP1R21Q6ZMI0 780 aa12.37□□□□□ -0.43
HDAC6-227ENST00000485102 OTOAQ7RTW8 1153 aa12.37□□□□□ -0.43
HDAC6-227ENST00000485102 MRGPRGQ86SM5 289 aa12.37□□□□□ -0.43
HDAC6-227ENST00000485102 AMER3Q8N944 861 aa12.37□□□□□ -0.43
HDAC6-227ENST00000485102 MAIP1Q8WWC4 291 aa12.37□□□□□ -0.43
HDAC6-227ENST00000485102 MAGEB10Q96LZ2 347 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-227ENST00000485102 NAP1L3Q99457 506 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-227ENST00000485102 PLCD4Q9BRC7 762 aa12.37□□□□□ -0.43
HDAC6-227ENST00000485102 DPH7Q9BTV6 452 aa12.37□□□□□ -0.43
HDAC6-227ENST00000485102 TREX1Q9NSU2 369 aa12.37□□□□□ -0.43
HDAC6-227ENST00000485102 MARCH4Q9P2E8 410 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-227ENST00000485102 MED13LQ71F56 2210 aa12.37□□□□□ -0.43
HDAC6-227ENST00000485102 DCHS2Q6V1P9 2916 aa12.36□□□□□ -0.43
HDAC6-227ENST00000485102 MTORP42345 2549 aa12.36□□□□□ -0.43
HDAC6-227ENST00000485102 AKAP9Q99996 3911 aa12.36□□□□□ -0.43
HDAC6-227ENST00000485102 TCRBV7S2A1N4TA0A589 114 aa12.36□□□□□ -0.43
HDAC6-227ENST00000485102 OR5H15A6NDH6 313 aa12.36□□□□□ -0.43
HDAC6-227ENST00000485102 NRP2O60462 931 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms