RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 SNX7Q9UNH6 387 aa18.34■□□□□ 0.53
SNX17-206ENST00000484886 FARSAQ9Y285 508 aaKnown RBP18.34■□□□□ 0.53
SNX17-206ENST00000484886 PCDHGA6Q9Y5G7 932 aa18.34■□□□□ 0.53
SNX17-206ENST00000484886 CDC14CA4D256 554 aa18.33■□□□□ 0.52
SNX17-206ENST00000484886 H3BMH7 237 aa18.33■□□□□ 0.52
SNX17-206ENST00000484886 CREG1O75629 220 aa18.33■□□□□ 0.52
SNX17-206ENST00000484886 ACSL3O95573 720 aa18.33■□□□□ 0.52
SNX17-206ENST00000484886 RHOXF2BP0C7M4 288 aa18.33■□□□□ 0.52
SNX17-206ENST00000484886 CCND1P24385 295 aa18.33■□□□□ 0.52
SNX17-206ENST00000484886 PTPN4P29074 926 aa18.33■□□□□ 0.52
SNX17-206ENST00000484886 ARSFP54793 590 aa18.33■□□□□ 0.52
SNX17-206ENST00000484886 SLC9A5Q14940 896 aa18.33■□□□□ 0.52
SNX17-206ENST00000484886 TBR1Q16650 682 aa18.33■□□□□ 0.52
SNX17-206ENST00000484886 DEFB109BQ30KR1 87 aa18.33■□□□□ 0.52
SNX17-206ENST00000484886 WASHC2DQ5SRD0 308 aa18.33■□□□□ 0.52
SNX17-206ENST00000484886 FRMPD2BQ6IN97 320 aa18.33■□□□□ 0.52
SNX17-206ENST00000484886 CAPN13Q6MZZ7 669 aaPredicted RBP18.33■□□□□ 0.52
SNX17-206ENST00000484886 TTLL10Q6ZVT0 673 aa18.33■□□□□ 0.52
SNX17-206ENST00000484886 RAPH1Q70E73 1250 aa18.33■□□□□ 0.52
SNX17-206ENST00000484886 RNF44Q7L0R7 432 aa18.33■□□□□ 0.52
SNX17-206ENST00000484886 ENDOVQ8N8Q3 282 aaKnown RBP18.33■□□□□ 0.52
SNX17-206ENST00000484886 PROKR1Q8TCW9 393 aa18.33■□□□□ 0.52
SNX17-206ENST00000484886 ANKRD49Q8WVL7 239 aa18.33■□□□□ 0.52
SNX17-206ENST00000484886 ATL1Q8WXF7 558 aa18.33■□□□□ 0.52
SNX17-206ENST00000484886 CATSPER2Q96P56 530 aa18.33■□□□□ 0.52
SNX17-206ENST00000484886 EGFL8Q99944 293 aa18.33■□□□□ 0.52
SNX17-206ENST00000484886 RHOXF2Q9BQY4 288 aa18.33■□□□□ 0.52
SNX17-206ENST00000484886 CUEDC1Q9NWM3 386 aaPredicted RBP18.33■□□□□ 0.52
SNX17-206ENST00000484886 IKZF3Q9UKT9 509 aa18.33■□□□□ 0.52
SNX17-206ENST00000484886 IGSF10Q6WRI0 2623 aa18.33■□□□□ 0.52
SNX17-206ENST00000484886 LOC105369274A0A096LPK9 316 aa18.32■□□□□ 0.52
SNX17-206ENST00000484886 IGKV1-8A0A0C4DH67 115 aa18.32■□□□□ 0.52
SNX17-206ENST00000484886 LOC102723532A0A0G2JNH3 316 aa18.32■□□□□ 0.52
SNX17-206ENST00000484886 H7BY64 318 aa18.32■□□□□ 0.52
SNX17-206ENST00000484886 SRPX2O60687 465 aaPredicted RBP18.32■□□□□ 0.52
SNX17-206ENST00000484886 C1QAP02745 245 aa18.32■□□□□ 0.52
SNX17-206ENST00000484886 CCDC166P0CW27 439 aa18.32■□□□□ 0.52
SNX17-206ENST00000484886 EZRP15311 586 aaKnown RBP18.32■□□□□ 0.52
SNX17-206ENST00000484886 DCDP81605 110 aaKnown RBP18.32■□□□□ 0.52
SNX17-206ENST00000484886 TSNQ15631 228 aaKnown RBP18.32■□□□□ 0.52
SNX17-206ENST00000484886 SOWAHCQ53LP3 525 aaPredicted RBP18.32■□□□□ 0.52
SNX17-206ENST00000484886 MLIPQ5VWP3 458 aa18.32■□□□□ 0.52
SNX17-206ENST00000484886 BORAQ6PGQ7 559 aa18.32■□□□□ 0.52
SNX17-206ENST00000484886 FAM198BQ6UWH4 519 aa18.32■□□□□ 0.52
SNX17-206ENST00000484886 SBSNQ6UWP8 590 aa18.32■□□□□ 0.52
SNX17-206ENST00000484886 ADAMTSL2Q86TH1 951 aa18.32■□□□□ 0.52
SNX17-206ENST00000484886 PAQR7Q86WK9 346 aa18.32■□□□□ 0.52
SNX17-206ENST00000484886 C17orf64Q86WR6 236 aa18.32■□□□□ 0.52
SNX17-206ENST00000484886 IFT20Q8IY31 132 aa18.32■□□□□ 0.52
SNX17-206ENST00000484886 OR4N4Q8N0Y3 316 aa18.32■□□□□ 0.52
SNX17-206ENST00000484886 SPATA6LQ8N4H0 392 aa18.32■□□□□ 0.52
SNX17-206ENST00000484886 SLC39A7Q92504 469 aa18.32■□□□□ 0.52
SNX17-206ENST00000484886 RERGQ96A58 199 aaPredicted RBP18.32■□□□□ 0.52
SNX17-206ENST00000484886 FBXL8Q96CD0 374 aa18.32■□□□□ 0.52
SNX17-206ENST00000484886 PRAP1Q96NZ9 151 aa18.32■□□□□ 0.52
SNX17-206ENST00000484886 BBC3Q96PG8 261 aaPredicted RBP18.32■□□□□ 0.52
SNX17-206ENST00000484886 CYTH2Q99418 400 aa18.32■□□□□ 0.52
SNX17-206ENST00000484886 C17orf62Q9BQA9 187 aa18.32■□□□□ 0.52
SNX17-206ENST00000484886 NLNQ9BYT8 704 aa18.32■□□□□ 0.52
SNX17-206ENST00000484886 CDC42EP4Q9H3Q1 356 aaKnown RBP18.32■□□□□ 0.52
SNX17-206ENST00000484886 CUTCQ9NTM9 273 aa18.32■□□□□ 0.52
SNX17-206ENST00000484886 IFT80Q9P2H3 777 aaPredicted RBP18.32■□□□□ 0.52
SNX17-206ENST00000484886 NOVA2Q9UNW9 492 aaKnown RBP18.32■□□□□ 0.52
SNX17-206ENST00000484886 MGAQ8IWI9 3026 aa18.31■□□□□ 0.52
SNX17-206ENST00000484886 HAT1O14929 419 aa18.31■□□□□ 0.52
SNX17-206ENST00000484886 RAB40ALP0C0E4 278 aa18.31■□□□□ 0.52
SNX17-206ENST00000484886 RAB10P61026 200 aa18.31■□□□□ 0.52
SNX17-206ENST00000484886 LY6DQ14210 128 aa18.31■□□□□ 0.52
SNX17-206ENST00000484886 YOD1Q5VVQ6 348 aaPredicted RBP18.31■□□□□ 0.52
SNX17-206ENST00000484886 ZNF517Q6ZMY9 492 aaPredicted RBP18.31■□□□□ 0.52
SNX17-206ENST00000484886 SYVN1Q86TM6 617 aa18.31■□□□□ 0.52
SNX17-206ENST00000484886 ANKRD7Q92527 254 aa18.31■□□□□ 0.52
SNX17-206ENST00000484886 PYCR2Q96C36 320 aa18.31■□□□□ 0.52
SNX17-206ENST00000484886 GBP5Q96PP8 586 aa18.31■□□□□ 0.52
SNX17-206ENST00000484886 DERL2Q9GZP9 239 aa18.31■□□□□ 0.52
SNX17-206ENST00000484886 NFU1Q9UMS0 254 aa18.31■□□□□ 0.52
SNX17-206ENST00000484886 PADI2Q9Y2J8 665 aa18.31■□□□□ 0.52
SNX17-206ENST00000484886 A0A1B0GX78 115 aa18.3■□□□□ 0.52
SNX17-206ENST00000484886 H0YGG7 62 aa18.3■□□□□ 0.52
SNX17-206ENST00000484886 ANXA5P08758 320 aa18.3■□□□□ 0.52
SNX17-206ENST00000484886 CDH1P12830 882 aa18.3■□□□□ 0.52
SNX17-206ENST00000484886 HRH2P25021 359 aa18.3■□□□□ 0.52
SNX17-206ENST00000484886 ECHS1P30084 290 aa18.3■□□□□ 0.52
SNX17-206ENST00000484886 CCR10P46092 362 aa18.3■□□□□ 0.52
SNX17-206ENST00000484886 ARF3P61204 181 aaPredicted RBP18.3■□□□□ 0.52
SNX17-206ENST00000484886 CSHL1Q14406 222 aa18.3■□□□□ 0.52
SNX17-206ENST00000484886 NCF4Q15080 339 aa18.3■□□□□ 0.52
SNX17-206ENST00000484886 FAM214AQ32MH5 1076 aa18.3■□□□□ 0.52
SNX17-206ENST00000484886 NKAIN1Q4KMZ8 207 aa18.3■□□□□ 0.52
SNX17-206ENST00000484886 ZNF385CQ66K41 422 aaPredicted RBP18.3■□□□□ 0.52
SNX17-206ENST00000484886 ZNF425Q6IV72 752 aa18.3■□□□□ 0.52
SNX17-206ENST00000484886 FBXO42Q6P3S6 717 aa18.3■□□□□ 0.52
SNX17-206ENST00000484886 RELL1Q8IUW5 271 aa18.3■□□□□ 0.52
SNX17-206ENST00000484886 PLD3Q8IV08 490 aa18.3■□□□□ 0.52
SNX17-206ENST00000484886 METTL27Q8N6F8 245 aaPredicted RBP18.3■□□□□ 0.52
SNX17-206ENST00000484886 CSNK1A1LQ8N752 337 aa18.3■□□□□ 0.52
SNX17-206ENST00000484886 CABS1Q96KC9 395 aa18.3■□□□□ 0.52
SNX17-206ENST00000484886 HAUS8Q9BT25 410 aa18.3■□□□□ 0.52
SNX17-206ENST00000484886 SGPP1Q9BX95 441 aa18.3■□□□□ 0.52
SNX17-206ENST00000484886 ACSS3Q9H6R3 686 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms