RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 TXNDC9O14530 226 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 MAP2K7O14733 419 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 ERVK-10P10266 1014 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 FBLP22087 321 aaKnown RBP10.92□□□□□ -0.66
SCFD1-206ENST00000484733 CLCN7P51798 805 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 ABATP80404 500 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 ZNF169Q14929 603 aaPredicted RBP10.92□□□□□ -0.66
SCFD1-206ENST00000484733 HIF1AQ16665 826 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 KLHL38Q2WGJ6 581 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 HIST2H2BCQ6DN03 193 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 ISLR2Q6UXK2 745 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 CAND1Q86VP6 1230 aaKnown RBP10.92□□□□□ -0.66
SCFD1-206ENST00000484733 ARHGEF39Q8N4T4 335 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 METTL27Q8N6F8 245 aaPredicted RBP10.92□□□□□ -0.66
SCFD1-206ENST00000484733 THOC3Q96J01 351 aaKnown RBP10.92□□□□□ -0.66
SCFD1-206ENST00000484733 PKP4Q99569 1192 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 LZTFL1Q9NQ48 299 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 C14orf105Q9NVL8 296 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 C3orf18Q9UK00 162 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 CRYL1Q9Y2S2 319 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 COMMD10Q9Y6G5 202 aa10.92□□□□□ -0.66
SCFD1-206ENST00000484733 GOLGA8KD6RF30 607 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 GOLGA8TH3BQL2 631 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 NRP2O60462 931 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 ALOX12BO75342 701 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 ACPPP15309 386 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 SLC26A3P40879 764 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 PNLIPRP1P54315 467 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 DSG2Q14126 1118 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 TTLL9Q3SXZ7 439 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 ICE2Q659A1 982 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 SHISA6Q6ZSJ9 500 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 NDUFAF7Q7L592 441 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 LMNTD2Q8IXW0 634 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 KBTBD2Q8IY47 623 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 DTWD1Q8N5C7 304 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 C5orf34Q96MH7 638 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 OR2A5Q96R48 311 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 CSAG2Q9Y5P2 127 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 IGKV1-8A0A0C4DH67 115 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 SDR42E2A6NKP2 422 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 E5RI56 91 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 GFYI3L273 518 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 E2F3O00716 465 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 USP1O94782 785 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 KRT14P02533 472 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 EIF2S1P05198 315 aaKnown RBP10.91□□□□□ -0.66
SCFD1-206ENST00000484733 ENO3P13929 434 aaPredicted RBP10.91□□□□□ -0.66
SCFD1-206ENST00000484733 EDN3P14138 238 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 EZRP15311 586 aaKnown RBP10.91□□□□□ -0.66
SCFD1-206ENST00000484733 SOX11P35716 441 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 SKIV2L2P42285 1042 aaKnown RBP10.91□□□□□ -0.66
SCFD1-206ENST00000484733 YBX1P67809 324 aaKnown RBP10.91□□□□□ -0.66
SCFD1-206ENST00000484733 GPS1Q13098 491 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 TLR1Q15399 786 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 RASGEF1CQ8N431 466 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 CSNK1A1LQ8N752 337 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 ASB11Q8WXH4 323 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 KCNJ9Q92806 393 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 CABS1Q96KC9 395 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 COL12A1Q99715 3063 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 EBNA1BP2Q99848 306 aaKnown RBP10.91□□□□□ -0.66
SCFD1-206ENST00000484733 XAB2Q9HCS7 855 aaKnown RBP10.91□□□□□ -0.66
SCFD1-206ENST00000484733 MKKSQ9NPJ1 570 aaPredicted RBP10.91□□□□□ -0.66
SCFD1-206ENST00000484733 DHRS7Q9Y394 339 aa10.91□□□□□ -0.66
SCFD1-206ENST00000484733 LOC102723996A0A087X1L8 192 aa10.9□□□□□ -0.66
SCFD1-206ENST00000484733 EIF3FO00303 357 aaPredicted RBP10.9□□□□□ -0.66
SCFD1-206ENST00000484733 AVILO75366 819 aa10.9□□□□□ -0.66
SCFD1-206ENST00000484733 KLHL18O94889 574 aa10.9□□□□□ -0.66
SCFD1-206ENST00000484733 CLDN1O95832 211 aa10.9□□□□□ -0.66
SCFD1-206ENST00000484733 CYC1P08574 325 aa10.9□□□□□ -0.66
SCFD1-206ENST00000484733 COX6A1P12074 109 aa10.9□□□□□ -0.66
SCFD1-206ENST00000484733 EMP2P54851 167 aa10.9□□□□□ -0.66
SCFD1-206ENST00000484733 DHX34Q14147 1143 aaKnown RBP10.9□□□□□ -0.66
SCFD1-206ENST00000484733 ANKRD22Q5VYY1 191 aa10.9□□□□□ -0.66
SCFD1-206ENST00000484733 SUSD1Q6UWL2 747 aa10.9□□□□□ -0.66
SCFD1-206ENST00000484733 CYHR1Q6ZMK1 362 aa10.9□□□□□ -0.66
SCFD1-206ENST00000484733 LURAP1LQ8IV03 231 aa10.9□□□□□ -0.66
SCFD1-206ENST00000484733 REXO1L1PQ8IX06 675 aa10.9□□□□□ -0.66
SCFD1-206ENST00000484733 LRRC56Q8IYG6 542 aaPredicted RBP10.9□□□□□ -0.66
SCFD1-206ENST00000484733 GRHL3Q8TE85 626 aa10.9□□□□□ -0.66
SCFD1-206ENST00000484733 FAR1Q8WVX9 515 aa10.9□□□□□ -0.66
SCFD1-206ENST00000484733 ACAT2Q9BWD1 397 aa10.9□□□□□ -0.66
SCFD1-206ENST00000484733 ZNF160Q9HCG1 818 aa10.9□□□□□ -0.66
SCFD1-206ENST00000484733 SAMD15Q9P1V8 674 aa10.9□□□□□ -0.66
SCFD1-206ENST00000484733 RUVBL1Q9Y265 456 aaKnown RBP10.9□□□□□ -0.66
SCFD1-206ENST00000484733 MED16Q9Y2X0 877 aa10.9□□□□□ -0.66
SCFD1-206ENST00000484733 ICE1Q9Y2F5 2266 aa10.9□□□□□ -0.66
SCFD1-206ENST00000484733 ZCWPW2A0A1B0GU75 182 aa10.9□□□□□ -0.67
SCFD1-206ENST00000484733 E7ENX8 843 aa10.9□□□□□ -0.67
SCFD1-206ENST00000484733 BMP10O95393 424 aa10.9□□□□□ -0.67
SCFD1-206ENST00000484733 SERPINA7P05543 415 aa10.9□□□□□ -0.67
SCFD1-206ENST00000484733 HRH2P25021 359 aa10.9□□□□□ -0.67
SCFD1-206ENST00000484733 MAGEA3P43357 314 aa10.9□□□□□ -0.67
SCFD1-206ENST00000484733 TAP2Q03519 686 aa10.9□□□□□ -0.67
SCFD1-206ENST00000484733 THOC5Q13769 683 aaKnown RBP10.9□□□□□ -0.67
SCFD1-206ENST00000484733 FAM53BQ14153 422 aa10.9□□□□□ -0.67
SCFD1-206ENST00000484733 TRIP13Q15645 432 aaPredicted RBP10.9□□□□□ -0.67
SCFD1-206ENST00000484733 CYP1B1Q16678 543 aa10.9□□□□□ -0.67
SCFD1-206ENST00000484733 VWA2Q5GFL6 755 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms