RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 RPL3P39023 403 aaKnown RBP11.53□□□□□ -0.56
SND1-210ENST00000483503 PIK3CBP42338 1070 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 KIR3DL1P43629 444 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 SEC13P55735 322 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 FOLH1Q04609 750 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 DMPKQ09013 629 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 MTAPQ13126 283 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 CYP2A13Q16696 494 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 CYP51A1Q16850 503 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 PGS1Q32NB8 556 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 PLA2G4EQ3MJ16 856 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 METRNLQ641Q3 311 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 GLYATQ6IB77 296 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 TMEM154Q6P9G4 183 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 NXPE4Q6UWF7 544 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 TMPRSS11BQ86T26 416 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 RALGPS2Q86X27 583 aaPredicted RBP11.53□□□□□ -0.56
SND1-210ENST00000483503 RIMKLAQ8IXN7 391 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 LAS2Q8IYD9 372 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 ADGRG5Q8IZF4 528 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 KRT78Q8N1N4 520 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 KRTCAP2Q8N6L1 136 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 VPS37AQ8NEZ2 397 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 OR2T12Q8NG77 320 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 OR7G3Q8NG95 312 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 OR52E4Q8NGH9 312 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 SLC5A11Q8WWX8 675 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 TFGQ92734 400 aaPredicted RBP11.53□□□□□ -0.56
SND1-210ENST00000483503 GATA6Q92908 595 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 FAM131CQ96AQ9 280 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 CXorf40BQ96DE9 158 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 CENPNQ96H22 339 aaPredicted RBP11.53□□□□□ -0.56
SND1-210ENST00000483503 TSSK3Q96PN8 268 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 TIMM29Q9BSF4 260 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 PITHD1Q9GZP4 211 aaPredicted RBP11.53□□□□□ -0.56
SND1-210ENST00000483503 TRIT1Q9H3H1 467 aaKnown RBP11.53□□□□□ -0.56
SND1-210ENST00000483503 GORASP2Q9H8Y8 452 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 PELI2Q9HAT8 420 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 ZDHHC4Q9NPG8 344 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 FAM120CQ9NX05 1096 aaKnown RBP11.53□□□□□ -0.56
SND1-210ENST00000483503 FBXL12Q9NXK8 326 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 CLDND1Q9NY35 253 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 SLAMF8Q9P0V8 285 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 PDP2Q9P2J9 529 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 PPT2Q9UMR5 302 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 AURKCQ9UQB9 309 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 NCKAP1Q9Y2A7 1128 aa11.53□□□□□ -0.56
SND1-210ENST00000483503 TCRBV5S2A0A599 114 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 EVPLLA8MZ36 301 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 FAM220BPB1ANY3 271 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 TXNDC9O14530 226 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 KDM1AO60341 852 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 DFNA5O60443 496 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 MYCLP1P12525 358 aaPredicted RBP11.52□□□□□ -0.57
SND1-210ENST00000483503 CDH1P12830 882 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 GGT1P19440 569 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 PPIBP23284 216 aaKnown RBP11.52□□□□□ -0.57
SND1-210ENST00000483503 BMP8BP34820 402 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 SOX9P48436 509 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 POLE2P56282 527 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 MTPNP58546 118 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 MRPS21P82921 87 aaKnown RBP11.52□□□□□ -0.57
SND1-210ENST00000483503 TAP2Q03519 686 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 TSTA3Q13630 321 aaPredicted RBP11.52□□□□□ -0.57
SND1-210ENST00000483503 DDX39BQ13838 428 aaKnown RBP11.52□□□□□ -0.57
SND1-210ENST00000483503 SLBPQ14493 270 aaKnown RBP eCLIP11.52□□□□□ -0.57
SND1-210ENST00000483503 IRF4Q15306 451 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 DUOXA1Q1HG43 343 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 PRAMEF14Q5SWL7 426 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 THEMIS2Q5TEJ8 643 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 ANXA8L1Q5VT79 327 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 PRAMEF13Q5VWM6 474 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 EP400NLQ6ZTU2 488 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 USP30Q70CQ3 517 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 HORMAD1Q86X24 394 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 LRRC56Q8IYG6 542 aaPredicted RBP11.52□□□□□ -0.57
SND1-210ENST00000483503 MARVELD2Q8N4S9 558 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 TP53I13Q8NBR0 393 aaPredicted RBP11.52□□□□□ -0.57
SND1-210ENST00000483503 OR8J2Q8NGG1 315 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 OR5K2Q8NHB8 316 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 CLHC1Q8NHS4 586 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 HUS1BQ8NHY5 278 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 CHTF18Q8WVB6 975 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 FOXJ1Q92949 421 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 NEIL2Q969S2 332 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 FAM120BQ96EK7 910 aaKnown RBP11.52□□□□□ -0.57
SND1-210ENST00000483503 HHIPQ96QV1 700 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 MTERF1Q99551 399 aaKnown RBP11.52□□□□□ -0.57
SND1-210ENST00000483503 RPP25Q9BUL9 199 aaKnown RBP11.52□□□□□ -0.57
SND1-210ENST00000483503 C9orf16Q9BUW7 83 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 UGT2B28Q9BY64 529 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 SLC17A9Q9BYT1 436 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 PAIP1Q9H074 479 aaKnown RBP11.52□□□□□ -0.57
SND1-210ENST00000483503 VAPAQ9P0L0 249 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 GMPR2Q9P2T1 348 aaKnown RBP11.52□□□□□ -0.57
SND1-210ENST00000483503 FZD4Q9ULV1 537 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 INVSQ9Y283 1065 aa11.52□□□□□ -0.57
SND1-210ENST00000483503 TRBV5-3A0A0A0MS03 114 aa11.51□□□□□ -0.57
SND1-210ENST00000483503 ELOVL7A1L3X0 281 aa11.51□□□□□ -0.57
SND1-210ENST00000483503 KRT87PA6NCN2 255 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms