RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 RPS27LQ71UM5 84 aaKnown RBP17.14■□□□□ 0.33
CPNE1-224ENST00000483359 PLD3Q8IV08 490 aa17.14■□□□□ 0.33
CPNE1-224ENST00000483359 CARFQ8N187 725 aa17.14■□□□□ 0.33
CPNE1-224ENST00000483359 GOLGA6L1Q8N7Z2 621 aa17.14■□□□□ 0.33
CPNE1-224ENST00000483359 MOCOSQ96EN8 888 aa17.14■□□□□ 0.33
CPNE1-224ENST00000483359 HAUS8Q9BT25 410 aa17.14■□□□□ 0.33
CPNE1-224ENST00000483359 DNAJC11Q9NVH1 559 aa17.14■□□□□ 0.33
CPNE1-224ENST00000483359 SEMA5BQ9P283 1151 aa17.14■□□□□ 0.33
CPNE1-224ENST00000483359 PLLPQ9Y342 182 aa17.14■□□□□ 0.33
CPNE1-224ENST00000483359 E7EQ34 232 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 PLD2O14939 933 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 HCRTR1O43613 425 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 MYL2P10916 166 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 ETV5P41161 510 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 CDC16Q13042 620 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 PDK4Q16654 411 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 LRRC70Q7Z2Q7 622 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 KMT5CQ86Y97 462 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 WDR36Q8NI36 951 aaKnown RBP17.13■□□□□ 0.33
CPNE1-224ENST00000483359 UBTD2Q8WUN7 234 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 SLC5A11Q8WWX8 675 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 PMEPA1Q969W9 287 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 OR6C1Q96RD1 312 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 CTRCQ99895 268 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 KCNK9Q9NPC2 374 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 WASF3Q9UPY6 502 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 BTRCQ9Y297 605 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 KCNE2Q9Y6J6 123 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 G3V2L1 256 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 MAP3K7O43318 606 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 FGF3P11487 239 aaPredicted RBP17.13■□□□□ 0.33
CPNE1-224ENST00000483359 ATP5F1P24539 256 aaPredicted RBP17.13■□□□□ 0.33
CPNE1-224ENST00000483359 GABREP78334 506 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 ABATP80404 500 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 CYP4F3Q08477 520 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 TUBB3Q13509 450 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 CACTIN-AS1Q8N1I8 211 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 D2HGDHQ8N465 521 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 TEX9Q8N6V9 391 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 TCTN2Q96GX1 697 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 TMEM237Q96Q45 408 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 APMAPQ9HDC9 416 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 SIDT1Q9NXL6 827 aaKnown RBP17.13■□□□□ 0.33
CPNE1-224ENST00000483359 ANGPTL3Q9Y5C1 460 aa17.13■□□□□ 0.33
CPNE1-224ENST00000483359 A0A0J9YVX5 310 aa17.12■□□□□ 0.33
CPNE1-224ENST00000483359 K7EPI3 171 aa17.12■□□□□ 0.33
CPNE1-224ENST00000483359 HAT1O14929 419 aa17.12■□□□□ 0.33
CPNE1-224ENST00000483359 CTSVO60911 334 aa17.12■□□□□ 0.33
CPNE1-224ENST00000483359 EIF3IQ13347 325 aaKnown RBP17.12■□□□□ 0.33
CPNE1-224ENST00000483359 TTMPQ5BVD1 217 aa17.12■□□□□ 0.33
CPNE1-224ENST00000483359 TMTC4Q5T4D3 741 aa17.12■□□□□ 0.33
CPNE1-224ENST00000483359 ZYG11AQ6WRX3 759 aa17.12■□□□□ 0.33
CPNE1-224ENST00000483359 N4BP2L2Q92802 583 aaPredicted RBP17.12■□□□□ 0.33
CPNE1-224ENST00000483359 GRAMD1AQ96CP6 724 aa17.12■□□□□ 0.33
CPNE1-224ENST00000483359 NSUN5Q96P11 429 aaKnown RBP17.12■□□□□ 0.33
CPNE1-224ENST00000483359 PLCD4Q9BRC7 762 aa17.12■□□□□ 0.33
CPNE1-224ENST00000483359 TMCO1Q9UM00 188 aa17.12■□□□□ 0.33
CPNE1-224ENST00000483359 ACTL7BQ9Y614 415 aa17.12■□□□□ 0.33
CPNE1-224ENST00000483359 KNTC1P50748 2209 aa17.12■□□□□ 0.33
CPNE1-224ENST00000483359 MED19A0JLT2 244 aaPredicted RBP17.11■□□□□ 0.33
CPNE1-224ENST00000483359 FEZF1A0PJY2 475 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 STX16-NPEPL1H3BU86 382 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 E2F3O00716 465 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 STX16O14662 325 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 FKBP9O95302 570 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 GNAZP19086 355 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 EPORP19235 508 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 VARSP26640 1264 aaKnown RBP17.11■□□□□ 0.33
CPNE1-224ENST00000483359 PCBP2Q15366 365 aaKnown RBP eCLIP17.11■□□□□ 0.335e-8■■□□□ 12.6
CPNE1-224ENST00000483359 GOLGA7Q7Z5G4 137 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 PAQR7Q86WK9 346 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 KLHDC8AQ8IYD2 350 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 BMPERQ8N8U9 685 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 ZUFSPQ96AP4 578 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 TLCD1Q96CP7 247 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 MECRQ9BV79 373 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 SPNS1Q9H2V7 528 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 MLXIPLQ9NP71 852 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 FGF21Q9NSA1 209 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 COPG2Q9UBF2 871 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 TNPO3Q9Y5L0 923 aaKnown RBP17.11■□□□□ 0.33
CPNE1-224ENST00000483359 AKAP13Q12802 2813 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 CACNA1AO00555 2505 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 HEATR5BQ9P2D3 2071 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 OR2A25A4D2G3 310 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 TMEM150CB9EJG8 249 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 CTSBP07858 339 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 CPA3P15088 417 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 EPB42P16452 691 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 TSPAN8P19075 237 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 ARL1P40616 181 aaPredicted RBP17.11■□□□□ 0.33
CPNE1-224ENST00000483359 NFKB2Q00653 900 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 CAMK2BQ13554 666 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 PCLAFQ15004 111 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 ZNF425Q6IV72 752 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 SH3GL2Q99962 352 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 SYNPO2LQ9H987 977 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 IRAK4Q9NWZ3 460 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 SLC39A1Q9NY26 324 aa17.11■□□□□ 0.33
CPNE1-224ENST00000483359 PCTPQ9UKL6 214 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms