RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 RAD51AP1Q96B01 352 aa13.24□□□□□ -0.29
VARS-226ENST00000483275 NACC2Q96BF6 587 aa13.24□□□□□ -0.29
VARS-226ENST00000483275 HES6Q96HZ4 224 aa13.24□□□□□ -0.29
VARS-226ENST00000483275 CALR3Q96L12 384 aaKnown RBP13.24□□□□□ -0.29
VARS-226ENST00000483275 RAB11FIP5Q9BXF6 653 aa13.24□□□□□ -0.29
VARS-226ENST00000483275 GALPQ9UBC7 116 aa13.24□□□□□ -0.29
VARS-226ENST00000483275 ANAPC5Q9UJX4 755 aa13.24□□□□□ -0.29
VARS-226ENST00000483275 RIMKLBQ9ULI2 386 aa13.24□□□□□ -0.29
VARS-226ENST00000483275 RUVBL1Q9Y265 456 aaKnown RBP13.24□□□□□ -0.29
VARS-226ENST00000483275 CACNA1CQ13936 2221 aa13.24□□□□□ -0.29
VARS-226ENST00000483275 IGKV1-8A0A0C4DH67 115 aa13.23□□□□□ -0.29
VARS-226ENST00000483275 OR2A25A4D2G3 310 aa13.23□□□□□ -0.29
VARS-226ENST00000483275 TARM1B6A8C7 271 aa13.23□□□□□ -0.29
VARS-226ENST00000483275 P2RX6O15547 441 aa13.23□□□□□ -0.29
VARS-226ENST00000483275 HNRNPRO43390 633 aaKnown RBP13.23□□□□□ -0.29
VARS-226ENST00000483275 NDUFS3O75489 264 aa13.23□□□□□ -0.29
VARS-226ENST00000483275 ITGAMP11215 1152 aa13.23□□□□□ -0.29
VARS-226ENST00000483275 MST1P26927 711 aa13.23□□□□□ -0.29
VARS-226ENST00000483275 FMO4P31512 558 aa13.23□□□□□ -0.29
VARS-226ENST00000483275 RPL22P35268 128 aaKnown RBP13.23□□□□□ -0.29
VARS-226ENST00000483275 CARSP49589 748 aaKnown RBP13.23□□□□□ -0.29
VARS-226ENST00000483275 TTPAP49638 278 aa13.23□□□□□ -0.29
VARS-226ENST00000483275 TNFSF10P50591 281 aa13.23□□□□□ -0.29
VARS-226ENST00000483275 MAT1AQ00266 395 aaKnown RBP13.23□□□□□ -0.29
VARS-226ENST00000483275 PRTGQ2VWP7 1150 aa13.23□□□□□ -0.29
VARS-226ENST00000483275 ATG9BQ674R7 924 aa13.23□□□□□ -0.29
VARS-226ENST00000483275 ZNF324BQ6AW86 544 aaPredicted RBP13.23□□□□□ -0.29
VARS-226ENST00000483275 SP5Q6BEB4 398 aaPredicted RBP13.23□□□□□ -0.29
VARS-226ENST00000483275 TTC23LQ6PF05 361 aa13.23□□□□□ -0.29
VARS-226ENST00000483275 GFRALQ6UXV0 394 aa13.23□□□□□ -0.29
VARS-226ENST00000483275 TMEM139Q8IV31 216 aa13.23□□□□□ -0.29
VARS-226ENST00000483275 CSNK1A1LQ8N752 337 aa13.23□□□□□ -0.29
VARS-226ENST00000483275 AMER3Q8N944 861 aa13.23□□□□□ -0.29
VARS-226ENST00000483275 CCDC89Q8N998 374 aa13.23□□□□□ -0.29
VARS-226ENST00000483275 ZUFSPQ96AP4 578 aa13.23□□□□□ -0.29
VARS-226ENST00000483275 ZFYVE21Q9BQ24 234 aa13.23□□□□□ -0.29
VARS-226ENST00000483275 TRIM56Q9BRZ2 755 aaKnown RBP13.23□□□□□ -0.29
VARS-226ENST00000483275 TREX1Q9NSU2 369 aa13.23□□□□□ -0.29
VARS-226ENST00000483275 SYBUQ9NX95 663 aa13.23□□□□□ -0.29
VARS-226ENST00000483275 IL1RAPL1Q9NZN1 696 aa13.23□□□□□ -0.29
VARS-226ENST00000483275 COPG2Q9UBF2 871 aa13.23□□□□□ -0.29
VARS-226ENST00000483275 ENTPD4Q9Y227 616 aa13.23□□□□□ -0.29
VARS-226ENST00000483275 C2CD3Q4AC94 2353 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 IGHV1-45A0A0A0MS14 117 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 A0A0A6YYC8 382 aaPredicted RBP13.22□□□□□ -0.29
VARS-226ENST00000483275 TRGV8A0A0C4DH27 118 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 IGHV3-20A0A0C4DH32 117 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 DYTNA2CJ06 578 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 I3L1I5 382 aaPredicted RBP13.22□□□□□ -0.29
VARS-226ENST00000483275 PCDH17O14917 1159 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 SRPX2O60687 465 aaPredicted RBP13.22□□□□□ -0.29
VARS-226ENST00000483275 USP1O94782 785 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 UNC5CO95185 931 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 WDPCPO95876 746 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 POU3F2P20265 443 aaPredicted RBP13.22□□□□□ -0.29
VARS-226ENST00000483275 MGAT1P26572 445 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 PPARGP37231 505 aaPredicted RBP13.22□□□□□ -0.29
VARS-226ENST00000483275 EMP2P54851 167 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 DSG2Q14126 1118 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 NAA30Q147X3 362 aaPredicted RBP13.22□□□□□ -0.29
VARS-226ENST00000483275 MUM1Q2TAK8 710 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 ACSBG2Q5FVE4 666 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 SEL1L2Q5TEA6 688 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 PRMT9Q6P2P2 845 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 FBXO42Q6P3S6 717 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 NEK10Q6ZWH5 1172 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 NDUFAF7Q7L592 441 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 PLD3Q8IV08 490 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 SYCE1Q8N0S2 351 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 COG1Q8WTW3 980 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 ITLN2Q8WWU7 325 aaPredicted RBP13.22□□□□□ -0.29
VARS-226ENST00000483275 NR4A3Q92570 626 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 MMABQ96EY8 250 aaPredicted RBP13.22□□□□□ -0.29
VARS-226ENST00000483275 BIRC8Q96P09 236 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 PANX3Q96QZ0 392 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 LMF1Q96S06 567 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 BAG1Q99933 345 aaPredicted RBP13.22□□□□□ -0.29
VARS-226ENST00000483275 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.22□□□□□ -0.29
VARS-226ENST00000483275 TAC3Q9UHF0 121 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 CRYL1Q9Y2S2 319 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 MRPS2Q9Y399 296 aaKnown RBP13.22□□□□□ -0.29
VARS-226ENST00000483275 KLK4Q9Y5K2 254 aa13.22□□□□□ -0.29
VARS-226ENST00000483275 HIVEP1P15822 2718 aa13.21□□□□□ -0.29
VARS-226ENST00000483275 IGLV3-12A0A075B6K2 115 aa13.21□□□□□ -0.29
VARS-226ENST00000483275 OR2W5A6NFC9 320 aa13.21□□□□□ -0.29
VARS-226ENST00000483275 VAPBO95292 243 aa13.21□□□□□ -0.29
VARS-226ENST00000483275 SERPINA7P05543 415 aa13.21□□□□□ -0.29
VARS-226ENST00000483275 HEXBP07686 556 aa13.21□□□□□ -0.29
VARS-226ENST00000483275 CMPK1P30085 196 aa13.21□□□□□ -0.29
VARS-226ENST00000483275 RPA3P35244 121 aaPredicted RBP13.21□□□□□ -0.29
VARS-226ENST00000483275 BASP1P80723 227 aaKnown RBP13.21□□□□□ -0.29
VARS-226ENST00000483275 KIF5AQ12840 1032 aa13.21□□□□□ -0.29
VARS-226ENST00000483275 KCNJ11Q14654 390 aa13.21□□□□□ -0.29
VARS-226ENST00000483275 PCOLCEQ15113 449 aa13.21□□□□□ -0.29
VARS-226ENST00000483275 PCID2Q5JVF3 399 aa13.21□□□□□ -0.29
VARS-226ENST00000483275 FCRLBQ6BAA4 426 aa13.21□□□□□ -0.29
VARS-226ENST00000483275 HIBCHQ6NVY1 386 aaPredicted RBP13.21□□□□□ -0.29
VARS-226ENST00000483275 LANCL3Q6ZV70 420 aa13.21□□□□□ -0.29
VARS-226ENST00000483275 PAQR7Q86WK9 346 aa13.21□□□□□ -0.29
VARS-226ENST00000483275 SLC13A5Q86YT5 568 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms