RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 KLHL17Q6TDP4 642 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 HTR3DQ70Z44 454 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 ZNF605Q86T29 641 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 ADAMTSL2Q86TH1 951 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 SLCO6A1Q86UG4 719 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 CIR1Q86X95 450 aaPredicted RBP7.54□□□□□ -1.2
SNX13-208ENST00000482558 ADGRG2Q8IZP9 1017 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 CFAP52Q8N1V2 620 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 FBXO39Q8N4B4 442 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 TMEM52Q8NDY8 209 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 OR4K2Q8NGD2 314 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 SLC26A7Q8TE54 656 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 POP5Q969H6 163 aaKnown RBP7.54□□□□□ -1.2
SNX13-208ENST00000482558 ISG20Q96AZ6 181 aaKnown RBP7.54□□□□□ -1.2
SNX13-208ENST00000482558 C19orf60Q96EN9 201 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 C16orf92Q96LL3 132 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 PRICKLE1Q96MT3 831 aaPredicted RBP7.54□□□□□ -1.2
SNX13-208ENST00000482558 COG8Q96MW5 612 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 TUBGCP5Q96RT8 1024 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 ATOH8Q96SQ7 321 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 FEM1AQ9BSK4 669 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 EFHD1Q9BUP0 239 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 TRIM15Q9C019 465 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 MUC13Q9H3R2 512 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 WDR55Q9H6Y2 383 aaPredicted RBP7.54□□□□□ -1.2
SNX13-208ENST00000482558 WDR41Q9HAD4 459 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 GCM1Q9NP62 436 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 RIC8BQ9NVN3 520 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 GID8Q9NWU2 228 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 NUDT4Q9NZJ9 180 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 MARCH4Q9P2E8 410 aaPredicted RBP7.54□□□□□ -1.2
SNX13-208ENST00000482558 DNMT3BQ9UBC3 853 aaKnown RBP7.54□□□□□ -1.2
SNX13-208ENST00000482558 MTF2Q9Y483 593 aaPredicted RBP7.54□□□□□ -1.2
SNX13-208ENST00000482558 TRIM17Q9Y577 477 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 KCTD3Q9Y597 815 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 PCDHGB5Q9Y5G0 923 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 INSL5Q9Y5Q6 135 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 SLC30A1Q9Y6M5 507 aa7.54□□□□□ -1.2
SNX13-208ENST00000482558 MICAL3Q7RTP6 2002 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 UBA6A0AVT1 1052 aaPredicted RBP7.53□□□□□ -1.2
SNX13-208ENST00000482558 MEI4A8MW99 385 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 E5RI56 91 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 PRMT5O14744 637 aaPredicted RBP7.53□□□□□ -1.2
SNX13-208ENST00000482558 ADAM12O43184 909 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 KIF1CO43896 1103 aaKnown RBP7.53□□□□□ -1.2
SNX13-208ENST00000482558 TBL1XO60907 577 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 CRCPO75575 148 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 BCAS2O75934 225 aaPredicted RBP7.53□□□□□ -1.2
SNX13-208ENST00000482558 GOSR1O95249 250 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 SEC24AO95486 1093 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 IGSF6O95976 241 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 PRLP01236 227 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 KLKB1P03952 638 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 CYBBP04839 570 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 NR2F1P10589 423 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 UROSP10746 265 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 LBPP18428 481 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 HDCP19113 662 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 AOAHP28039 575 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 FNTBP49356 437 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 PLK1P53350 603 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 SH3BGRP55822 239 aaPredicted RBP7.53□□□□□ -1.2
SNX13-208ENST00000482558 TWF1Q12792 350 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 IL10RAQ13651 578 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 FLOT2Q14254 428 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 FASTKQ14296 549 aaKnown RBP7.53□□□□□ -1.2
SNX13-208ENST00000482558 IHHQ14623 411 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 SMU1Q2TAY7 513 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 UNC50Q53HI1 259 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 ZNF789Q5FWF6 425 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 ZNF362Q5T0B9 420 aaPredicted RBP7.53□□□□□ -1.2
SNX13-208ENST00000482558 KANK2Q63ZY3 851 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 GRAMD4Q6IC98 578 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 ZNF549Q6P9A3 640 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 RNF165Q6ZSG1 346 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 LARP4Q71RC2 724 aaKnown RBP eCLIP7.53□□□□□ -1.2
SNX13-208ENST00000482558 TMEM173Q86WV6 379 aaPredicted RBP7.53□□□□□ -1.2
SNX13-208ENST00000482558 RBFAQ8N0V3 343 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 PTGR2Q8N8N7 351 aaPredicted RBP7.53□□□□□ -1.2
SNX13-208ENST00000482558 LPCAT1Q8NF37 534 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 OR56A4Q8NGH8 313 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 OR13C4Q8NGS5 318 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 LILRB1Q8NHL6 650 aaPredicted RBP7.53□□□□□ -1.2
SNX13-208ENST00000482558 AGR3Q8TD06 166 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 DTX3LQ8TDB6 740 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 ANKRD49Q8WVL7 239 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 ASB9Q96DX5 294 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 PHF21BQ96EK2 531 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 SGF29Q96ES7 293 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 DUS3LQ96G46 650 aaKnown RBP7.53□□□□□ -1.2
SNX13-208ENST00000482558 CATSPER2Q96P56 530 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 DEFB118Q96PH6 123 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 JMJD8Q96S16 334 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 CDRT15Q96T59 188 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 ECSITQ9BQ95 431 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 ATP13A3Q9H7F0 1226 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 SPAG4Q9NPE6 437 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 NECTIN3Q9NQS3 549 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 C8orf4Q9NR00 106 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 GNPTGQ9UJJ9 305 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms