RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 TYSND1Q2T9J0 566 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 LIMS2Q7Z4I7 341 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 VPS37AQ8NEZ2 397 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 OR4K1Q8NGD4 311 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 MYDGFQ969H8 173 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 CD244Q9BZW8 370 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 ANKMY1Q9P2S6 941 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 MAP4K5Q9Y4K4 846 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 PCDHGA3Q9Y5H0 932 aa12.36□□□□□ -0.43
VPS52-218ENST00000482399 A0A0U1RQF3 1178 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 PCDHGA12O60330 932 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 TPST2O60704 377 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 RPLP0P05388 317 aaKnown RBP12.35□□□□□ -0.43
VPS52-218ENST00000482399 FPR1P21462 350 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 ZFP36L2P47974 494 aaKnown RBP12.35□□□□□ -0.43
VPS52-218ENST00000482399 GABARAPL2P60520 117 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 MTA1Q13330 715 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 HKDC1Q2TB90 917 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 C2orf73Q8N5S3 287 aaPredicted RBP12.35□□□□□ -0.43
VPS52-218ENST00000482399 KBTBD8Q8NFY9 601 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 GPR150Q8NGU9 434 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 SLC38A4Q969I6 547 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 ACPTQ9BZG2 426 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 MAGEH1Q9H213 219 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 TOR4AQ9NXH8 423 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 TMEFF2Q9UIK5 374 aaPredicted RBP12.35□□□□□ -0.43
VPS52-218ENST00000482399 CNTRLQ7Z7A1 2325 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 DOCK1Q14185 1865 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 OR2AG2A6NM03 316 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 ZW10O43264 779 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 SSX4O60224 188 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 B4GALT3O60512 393 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 UPK1BO75841 260 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 CCNDBP1O95273 360 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 SOX14O95416 240 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 CHI3L1P36222 383 aaPredicted RBP12.35□□□□□ -0.43
VPS52-218ENST00000482399 SGSHP51688 502 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 ABHD18Q0P651 414 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 DSC3Q14574 896 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 MAD2L1BPQ15013 274 aaPredicted RBP12.35□□□□□ -0.43
VPS52-218ENST00000482399 ACOX1Q15067 660 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 PRSS36Q5K4E3 855 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 AGAP7PQ5VUJ5 663 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 CYP2U1Q7Z449 544 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 MSRB3Q8IXL7 192 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 LMNTD1Q8N9Z9 388 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 GLB1L3Q8NCI6 653 aaPredicted RBP12.35□□□□□ -0.43
VPS52-218ENST00000482399 VANGL1Q8TAA9 524 aaPredicted RBP12.35□□□□□ -0.43
VPS52-218ENST00000482399 ZNF675Q8TD23 568 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 RHBDF1Q96CC6 855 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 SLC39A13Q96H72 371 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 CENPOQ9BU64 300 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 CTPS2Q9NRF8 586 aa12.35□□□□□ -0.43
VPS52-218ENST00000482399 GLYATL1P3A0A0U1RQE8 302 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 H3BM21 787 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 ARNTLO00327 626 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 AKR1A1P14550 325 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 HOXD9P28356 352 aaPredicted RBP12.34□□□□□ -0.43
VPS52-218ENST00000482399 MAPKAPK2P49137 400 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 SLC35A2P78381 396 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 CYP4F8P98187 520 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 CD83Q01151 205 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 SBSNQ6UWP8 590 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 PTCHD4Q6ZW05 846 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 SLC35B4Q969S0 331 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 MYO19Q96H55 970 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 TSPAN18Q96SJ8 248 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 TBC1D14Q9P2M4 693 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 FZD4Q9ULV1 537 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 ILVBLA1L0T0 632 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 FEN1P39748 380 aaKnown RBP12.34□□□□□ -0.43
VPS52-218ENST00000482399 SLC15A1P46059 708 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 RAB25P57735 213 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 GPR149Q86SP6 731 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 LYSMD2Q8IV50 215 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 OR10G2Q8NGC3 310 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 GTF3C2Q8WUA4 911 aaPredicted RBP12.34□□□□□ -0.43
VPS52-218ENST00000482399 TRNT1Q96Q11 434 aaKnown RBP12.34□□□□□ -0.43
VPS52-218ENST00000482399 GPR62Q9BZJ7 368 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 TPT1P8Q9HAU6 139 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 HAS3O00219 553 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 CCRL2O00421 344 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 TMCC2O75069 709 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 SLC10A3P09131 477 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 PRR35P0CG20 571 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 OR1D2P34982 312 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 SMAD3P84022 425 aaKnown RBP12.34□□□□□ -0.43
VPS52-218ENST00000482399 STARD3Q14849 445 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 FAM110CQ1W6H9 321 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 VMACQ2NL98 169 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 SPATS1Q496A3 300 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 MFSD14CQ5VZR4 134 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 LAIR2Q6ISS4 152 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 METTL4Q8N3J2 472 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 PARP16Q8N5Y8 322 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 OR9Q2Q8NGE9 314 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 DYNC2LI1Q8TCX1 351 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 TRPV5Q9NQA5 729 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 ACSL6Q9UKU0 697 aa12.34□□□□□ -0.43
VPS52-218ENST00000482399 BPTFQ12830 3046 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms