RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 PLD3Q8IV08 490 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 DCBLD1Q8N8Z6 715 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 C19orf47Q8N9M1 422 aaKnown RBP12.73□□□□□ -0.37
HDAC1-208ENST00000482310 PPP4R1Q8TF05 950 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 UBTD2Q8WUN7 234 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 NEIL2Q969S2 332 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 PRR11Q96HE9 360 aaPredicted RBP12.73□□□□□ -0.37
HDAC1-208ENST00000482310 TMEM74Q96NL1 305 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 PRAP1Q96NZ9 151 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 TRAPPC9Q96Q05 1148 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 DPYSL5Q9BPU6 564 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 HAUS8Q9BT25 410 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 PITPNM3Q9BZ71 974 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 RAB33BQ9H082 229 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 SEMA4BQ9NPR2 832 aaPredicted RBP12.73□□□□□ -0.37
HDAC1-208ENST00000482310 C1GALT1Q9NS00 363 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 COPG2Q9UBF2 871 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 EPHA6Q9UF33 1036 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 RALYQ9UKM9 306 aaKnown RBP12.73□□□□□ -0.37
HDAC1-208ENST00000482310 TMCO1Q9UM00 188 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 ACTL7BQ9Y614 415 aa12.73□□□□□ -0.37
HDAC1-208ENST00000482310 IGKV1-8A0A0C4DH67 115 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 FEZF1A0PJY2 475 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 CCDC189A1A4V9 331 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 EFCAB7A8K855 629 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 HMGB1P1B2RPK0 211 aaPredicted RBP12.72□□□□□ -0.37
HDAC1-208ENST00000482310 K7EPI3 171 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 PRPF4O43172 522 aaKnown RBP eCLIP12.72□□□□□ -0.37
HDAC1-208ENST00000482310 KLK8O60259 260 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 IPO13O94829 963 aaKnown RBP12.72□□□□□ -0.37
HDAC1-208ENST00000482310 SUPT7LO94864 414 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 DKK1O94907 266 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 ZWINTO95229 277 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 ATXN8OSP0DMR3 200 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 NEFHP12036 1026 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 NPPBP16860 134 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 VARSP26640 1264 aaKnown RBP12.72□□□□□ -0.37
HDAC1-208ENST00000482310 ALDH3A1P30838 453 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 CSTF2P33240 577 aaKnown RBP eCLIP12.72□□□□□ -0.37
HDAC1-208ENST00000482310 CCR10P46092 362 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 FOXM1Q08050 763 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 GPR19Q15760 415 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 ZIC1Q15915 447 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 ST3GAL2Q16842 350 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 CDKL4Q5MAI5 379 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 HHATQ5VTY9 493 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 FCRL6Q6DN72 434 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 ZCCHC23Q6ZST2 131 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 LRRC70Q7Z2Q7 622 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 MDM1Q8TC05 714 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 SLC5A11Q8WWX8 675 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 ADAMTS14Q8WXS8 1223 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 N4BP2L2Q92802 583 aaPredicted RBP12.72□□□□□ -0.37
HDAC1-208ENST00000482310 ATP6V1E2Q96A05 226 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 FCRL4Q96PJ5 515 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 CD180Q99467 661 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 STRADBQ9C0K7 418 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 PCBD2Q9H0N5 130 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 SSU72Q9NP77 194 aaKnown RBP12.72□□□□□ -0.37
HDAC1-208ENST00000482310 IRAK4Q9NWZ3 460 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 OCIAD1Q9NX40 245 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 MID2Q9UJV3 735 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 KNTC1P50748 2209 aa12.72□□□□□ -0.37
HDAC1-208ENST00000482310 A0A0J9YVX5 310 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 STX16-NPEPL1H3BU86 382 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 E2F3O00716 465 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 STX16O14662 325 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 HAT1O14929 419 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 TM9SF1O15321 606 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 KATNA1O75449 491 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 ZBTB11O95625 1053 aaPredicted RBP12.71□□□□□ -0.37
HDAC1-208ENST00000482310 CDK4P11802 303 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 EPB42P16452 691 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 ITIH1P19827 911 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 GGT5P36269 586 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 MAPK10P53779 464 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 PRKAA2P54646 552 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 CDH13P55290 713 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 HERVK_113P63132 956 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 NFKB2Q00653 900 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 PRDX1Q06830 199 aaKnown RBP12.71□□□□□ -0.37
HDAC1-208ENST00000482310 ZFP36L1Q07352 338 aaKnown RBP12.71□□□□□ -0.37
HDAC1-208ENST00000482310 SQSTM1Q13501 440 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 HSP90B2PQ58FF3 399 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 XKR6Q5GH73 641 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 CFAP157Q5JU67 520 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 ZNF678Q5SXM1 525 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 SLC22A9Q8IVM8 553 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 RDH11Q8TC12 318 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 CDK15Q96Q40 435 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 CTRCQ99895 268 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 ERVK-6Q9BXR3 956 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 SHCBP1LQ9BZQ2 653 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 SPNS1Q9H2V7 528 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 ZNF768Q9H5H4 540 aaKnown RBP12.71□□□□□ -0.37
HDAC1-208ENST00000482310 FAM60AQ9NP50 221 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 PDE7BQ9NP56 450 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 NKIRAS1Q9NYS0 192 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 PCTPQ9UKL6 214 aa12.71□□□□□ -0.37
HDAC1-208ENST00000482310 SATB2Q9UPW6 733 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms