RNA–Protein interactions for RNA: ENST00000481673.5

CHKB-209, Transcript of choline kinase beta, humanhuman

TSL 1 (best)

Gene CHKB, Length 1,856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-209ENST00000481673 TRPV3Q8NET8 790 aa19.2■□□□□ 0.66
CHKB-209ENST00000481673 SLC5A11Q8WWX8 675 aa19.2■□□□□ 0.66
CHKB-209ENST00000481673 EZH1Q92800 747 aaPredicted RBP19.2■□□□□ 0.66
CHKB-209ENST00000481673 PPWD1Q96BP3 646 aaKnown RBP19.2■□□□□ 0.66
CHKB-209ENST00000481673 MTERF1Q99551 399 aaKnown RBP19.2■□□□□ 0.66
CHKB-209ENST00000481673 TIMM29Q9BSF4 260 aa19.2■□□□□ 0.66
CHKB-209ENST00000481673 SLC17A9Q9BYT1 436 aa19.2■□□□□ 0.66
CHKB-209ENST00000481673 SPATA7Q9P0W8 599 aa19.2■□□□□ 0.66
CHKB-209ENST00000481673 SERGEFQ9UGK8 458 aa19.2■□□□□ 0.66
CHKB-209ENST00000481673 ZFR2Q9UPR6 939 aaKnown RBP19.2■□□□□ 0.66
CHKB-209ENST00000481673 ERGP11308 486 aa19.19■□□□□ 0.66
CHKB-209ENST00000481673 PIK3CBP42338 1070 aa19.19■□□□□ 0.66
CHKB-209ENST00000481673 KIR3DL1P43629 444 aa19.19■□□□□ 0.66
CHKB-209ENST00000481673 LRRC74AQ0VAA2 488 aa19.19■□□□□ 0.66
CHKB-209ENST00000481673 GRSF1Q12849 480 aaKnown RBP eCLIP19.19■□□□□ 0.66
CHKB-209ENST00000481673 MTAPQ13126 283 aa19.19■□□□□ 0.66
CHKB-209ENST00000481673 IRF4Q15306 451 aa19.19■□□□□ 0.66
CHKB-209ENST00000481673 RUNDC3AQ59EK9 446 aa19.19■□□□□ 0.66
CHKB-209ENST00000481673 TBCELQ5QJ74 424 aa19.19■□□□□ 0.66
CHKB-209ENST00000481673 GALNT18Q6P9A2 607 aa19.19■□□□□ 0.66
CHKB-209ENST00000481673 NXPE4Q6UWF7 544 aa19.19■□□□□ 0.66
CHKB-209ENST00000481673 FAM83HQ6ZRV2 1179 aaPredicted RBP19.19■□□□□ 0.66
CHKB-209ENST00000481673 ERMP1Q7Z2K6 904 aa19.19■□□□□ 0.66
CHKB-209ENST00000481673 TMPRSS11BQ86T26 416 aa19.19■□□□□ 0.66
CHKB-209ENST00000481673 TBC1D21Q8IYX1 336 aa19.19■□□□□ 0.66
CHKB-209ENST00000481673 IL17RCQ8NAC3 791 aa19.19■□□□□ 0.66
CHKB-209ENST00000481673 PAPD5Q8NDF8 572 aaKnown RBP19.19■□□□□ 0.66
CHKB-209ENST00000481673 OR52E4Q8NGH9 312 aa19.19■□□□□ 0.66
CHKB-209ENST00000481673 OR14C36Q8NHC7 312 aa19.19■□□□□ 0.66
CHKB-209ENST00000481673 TSSK3Q96PN8 268 aa19.19■□□□□ 0.66
CHKB-209ENST00000481673 PRPF18Q99633 342 aaKnown RBP19.19■□□□□ 0.66
CHKB-209ENST00000481673 THUMPD3Q9BV44 507 aaKnown RBP19.19■□□□□ 0.66
CHKB-209ENST00000481673 LGR4Q9BXB1 951 aa19.19■□□□□ 0.66
CHKB-209ENST00000481673 MKRN2Q9H000 416 aaKnown RBP19.19■□□□□ 0.66
CHKB-209ENST00000481673 MBNL1Q9NR56 388 aaKnown RBP19.19■□□□□ 0.66
CHKB-209ENST00000481673 VAPAQ9P0L0 249 aa19.19■□□□□ 0.66
CHKB-209ENST00000481673 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.19■□□□□ 0.66
CHKB-209ENST00000481673 ADGRE2Q9UHX3 823 aa19.19■□□□□ 0.66
CHKB-209ENST00000481673 NCKAP1Q9Y2A7 1128 aa19.19■□□□□ 0.66
CHKB-209ENST00000481673 LRRK1Q38SD2 2015 aa19.19■□□□□ 0.66
CHKB-209ENST00000481673 SLC35G4P0C7Q5 338 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 HOXB2P14652 356 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 LTBRP36941 435 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 CYP51A1Q16850 503 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 HORMAD1Q86X24 394 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 ANKFN1Q8N957 763 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 OR8J2Q8NGG1 315 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 HUS1BQ8NHY5 278 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 CHTF18Q8WVB6 975 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 LRTOMTQ8WZ04 291 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 GATA6Q92908 595 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 NSMCE2Q96MF7 247 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 GBP5Q96PP8 586 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 TRIT1Q9H3H1 467 aaKnown RBP19.18■□□□□ 0.66
CHKB-209ENST00000481673 GORASP2Q9H8Y8 452 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 CKAP5Q14008 2032 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 MAGEB17A8MXT2 336 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 DENRO43583 198 aaKnown RBP19.18■□□□□ 0.66
CHKB-209ENST00000481673 HOXC4P09017 264 aaPredicted RBP19.18■□□□□ 0.66
CHKB-209ENST00000481673 FASP25445 335 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 CLCN2P51788 898 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 CTBSQ01459 385 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 CYP4F3Q08477 520 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 PLA2G4EQ3MJ16 856 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 SLC44A4Q53GD3 710 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 THEMIS2Q5TEJ8 643 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 GLYATQ6IB77 296 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 KIAA1211LQ6NV74 962 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 KRT78Q8N1N4 520 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 DNASE1L2Q92874 299 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 CXorf40BQ96DE9 158 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 ZNF583Q96ND8 569 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 PITHD1Q9GZP4 211 aaPredicted RBP19.18■□□□□ 0.66
CHKB-209ENST00000481673 FAM120CQ9NX05 1096 aaKnown RBP19.18■□□□□ 0.66
CHKB-209ENST00000481673 SLC23A2Q9UGH3 650 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 ANAPC2Q9UJX6 822 aa19.18■□□□□ 0.66
CHKB-209ENST00000481673 TRBV5-3A0A0A0MS03 114 aa19.17■□□□□ 0.66
CHKB-209ENST00000481673 A0A1W2PQU0 124 aa19.17■□□□□ 0.66
CHKB-209ENST00000481673 AKAP10O43572 662 aa19.17■□□□□ 0.66
CHKB-209ENST00000481673 PCNAP12004 261 aa19.17■□□□□ 0.66
CHKB-209ENST00000481673 GLULP15104 373 aa19.17■□□□□ 0.66
CHKB-209ENST00000481673 CXCR2P25025 360 aa19.17■□□□□ 0.66
CHKB-209ENST00000481673 TACR1P25103 407 aa19.17■□□□□ 0.66
CHKB-209ENST00000481673 YBX1P67809 324 aaKnown RBP19.17■□□□□ 0.66
CHKB-209ENST00000481673 DDX39BQ13838 428 aaKnown RBP19.17■□□□□ 0.66
CHKB-209ENST00000481673 CYP2A13Q16696 494 aa19.17■□□□□ 0.66
CHKB-209ENST00000481673 AAK1Q2M2I8 961 aa19.17■□□□□ 0.66
CHKB-209ENST00000481673 PRAMEF14Q5SWL7 426 aa19.17■□□□□ 0.66
CHKB-209ENST00000481673 PRAMEF13Q5VWM6 474 aa19.17■□□□□ 0.66
CHKB-209ENST00000481673 CACUL1Q86Y37 369 aa19.17■□□□□ 0.66
CHKB-209ENST00000481673 APLFQ8IW19 511 aaPredicted RBP19.17■□□□□ 0.66
CHKB-209ENST00000481673 ADGRG5Q8IZF4 528 aa19.17■□□□□ 0.66
CHKB-209ENST00000481673 PACRGLQ8N7B6 248 aa19.17■□□□□ 0.66
CHKB-209ENST00000481673 VPS37AQ8NEZ2 397 aa19.17■□□□□ 0.66
CHKB-209ENST00000481673 OR2T12Q8NG77 320 aa19.17■□□□□ 0.66
CHKB-209ENST00000481673 CLHC1Q8NHS4 586 aa19.17■□□□□ 0.66
CHKB-209ENST00000481673 ERLEC1Q96DZ1 483 aa19.17■□□□□ 0.66
CHKB-209ENST00000481673 PAIP1Q9H074 479 aaKnown RBP19.17■□□□□ 0.66
CHKB-209ENST00000481673 SCOCQ9UIL1 159 aa19.17■□□□□ 0.66
CHKB-209ENST00000481673 AURKCQ9UQB9 309 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms