RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 OR4F21O95013 312 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 CAPN1P07384 714 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 GIMD1P0DJR0 217 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 KITP10721 976 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 ACPPP15309 386 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 ENGP17813 658 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 ADSLP30566 484 aaPredicted RBP9.8□□□□□ -0.84
USP39-215ENST00000481409 PIK3CBP42338 1070 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 ARFIP1P53367 373 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 AQP5P55064 265 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 BNIP3Q12983 259 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 CSTF3Q12996 717 aaKnown RBP9.8□□□□□ -0.84
USP39-215ENST00000481409 IFT88Q13099 833 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 MAD2L1Q13257 205 aaPredicted RBP9.8□□□□□ -0.84
USP39-215ENST00000481409 SQSTM1Q13501 440 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 FASTKQ14296 549 aaKnown RBP9.8□□□□□ -0.84
USP39-215ENST00000481409 NR0B2Q15466 257 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 DEFB133Q30KQ1 61 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 FRG2Q64ET8 278 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 CGB2Q6NT52 195 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 MED27Q6P2C8 311 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 TRIM46Q7Z4K8 759 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 FAM129CQ86XR2 697 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 PPFIBP2Q8ND30 876 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 OR2L3Q8NG85 312 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 CEP70Q8NHQ1 597 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 ACTRT2Q8TDY3 377 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 TWIST2Q8WVJ9 160 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 C10orf82Q8WW14 230 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 USP7Q93009 1102 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 NEIL2Q969S2 332 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 THAP11Q96EK4 314 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 C19orf60Q96EN9 201 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 IL17FQ96PD4 163 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 FRG2BQ96QU4 278 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 CHRNA10Q9GZZ6 450 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 FAM107BQ9H098 131 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 ARRDC1-AS1Q9H2J1 176 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 ELOVL6Q9H5J4 265 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 ZNF395Q9H8N7 513 aaPredicted RBP9.8□□□□□ -0.84
USP39-215ENST00000481409 KCNK13Q9HB14 408 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 MRPS30Q9NP92 439 aaKnown RBP9.8□□□□□ -0.84
USP39-215ENST00000481409 UCKL1Q9NWZ5 548 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 TAC3Q9UHF0 121 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 GON4LQ3T8J9 2241 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 A0A0G2JND7 137 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 TRBC2A0A5B9 178 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 OR6C74A6NCV1 312 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 ISM1B1AKI9 464 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 E7EQ34 232 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 SLC22A2O15244 555 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 FLRT2O43155 660 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 RGS14O43566 566 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 SDC3O75056 442 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 AMD1P17707 334 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 PRPH2P23942 346 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 AHRP35869 848 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 NBL1P41271 181 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 GRK6P43250 576 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 CCR10P46092 362 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 CAPZBP47756 277 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 DOC2AQ14183 400 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 SF1Q15637 639 aaKnown RBP9.79□□□□□ -0.84
USP39-215ENST00000481409 FBXO48Q5FWF7 155 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 XKR7Q5GH72 579 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 SPDYAQ5MJ70 313 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 OGFOD2Q6N063 350 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 SUSD1Q6UWL2 747 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 TMIGD1Q6UXZ0 262 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 ATG14Q6ZNE5 492 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 RPS27LQ71UM5 84 aaKnown RBP9.79□□□□□ -0.84
USP39-215ENST00000481409 TMPRSS11BQ86T26 416 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 FAM9CQ8IZT9 166 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 MINDY1Q8N5J2 469 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 CDYL2Q8N8U2 506 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 SUMF1Q8NBK3 374 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 OR10G6Q8NH81 332 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 WDR20Q8TBZ3 569 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 ZDHHC12Q96GR4 267 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 PPP3R2Q96LZ3 170 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 TMEM120AQ9BXJ8 343 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 RHBGQ9H310 441 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 TCF7L2Q9NQB0 619 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 TMEM45AQ9NWC5 275 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 HRASLS2Q9NWW9 162 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 ACTR10Q9NZ32 417 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.79□□□□□ -0.84
USP39-215ENST00000481409 LRIT1Q9P2V4 623 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 MARCOQ9UEW3 520 aaPredicted RBP9.79□□□□□ -0.84
USP39-215ENST00000481409 PADI4Q9UM07 663 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 PLAGL1Q9UM63 463 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 TMED5Q9Y3A6 229 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 R4GN57 208 aa9.79□□□□□ -0.84
USP39-215ENST00000481409 COL5A1P20908 1838 aaPredicted RBP9.78□□□□□ -0.84
USP39-215ENST00000481409 TRBV23OR9-2A0A075B6M9 112 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 A0A0J9YY10 115 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 EME2A4GXA9 379 aaPredicted RBP9.78□□□□□ -0.84
USP39-215ENST00000481409 MANBAO00462 879 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 BTN3A3O00478 584 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 PPP6CO00743 305 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 495.1 ms