RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 EHD1Q9H4M9 534 aa16.94■□□□□ 0.3
UPF3A-206ENST00000480362 WDR55Q9H6Y2 383 aaPredicted RBP16.94■□□□□ 0.3
UPF3A-206ENST00000480362 MEAF6Q9HAF1 191 aa16.94■□□□□ 0.3
UPF3A-206ENST00000480362 PELI2Q9HAT8 420 aa16.94■□□□□ 0.3
UPF3A-206ENST00000480362 CUEDC1Q9NWM3 386 aaPredicted RBP16.94■□□□□ 0.3
UPF3A-206ENST00000480362 HRASLS2Q9NWW9 162 aa16.94■□□□□ 0.3
UPF3A-206ENST00000480362 ACTR10Q9NZ32 417 aa16.94■□□□□ 0.3
UPF3A-206ENST00000480362 LRIT1Q9P2V4 623 aa16.94■□□□□ 0.3
UPF3A-206ENST00000480362 APOBEC2Q9Y235 224 aaKnown RBP16.94■□□□□ 0.3
UPF3A-206ENST00000480362 RNF215Q9Y6U7 377 aa16.94■□□□□ 0.3
UPF3A-206ENST00000480362 CACNA1EQ15878 2313 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 ZNF318Q5VUA4 2279 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 GOLGA8QA0A0J9YX86 632 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 GSAPA4D1B5 854 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 GOLGA8OA6NCC3 632 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 LILRA5A6NI73 299 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 GOLGA8NF8WBI6 632 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 H7BY64 318 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 CCNDBP1O95273 360 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 KRT6AP02538 564 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 KRT6BP04259 564 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 RETP07949 1114 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 LINC00032P0C843 101 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 MYF5P13349 255 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 TYRP1P17643 537 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 CMPK1P30085 196 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 KRT6CP48668 564 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 HTR6P50406 440 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 CCR8P51685 355 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 ATXN3P54252 364 aaPredicted RBP16.93■□□□□ 0.3
UPF3A-206ENST00000480362 INHBCP55103 352 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 ABATP80404 500 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 MEF2AQ02078 507 aaPredicted RBP16.93■□□□□ 0.3
UPF3A-206ENST00000480362 LAPTM5Q13571 262 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 SLBPQ14493 270 aaKnown RBP eCLIP16.93■□□□□ 0.3
UPF3A-206ENST00000480362 SGO1Q5FBB7 561 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 ZCCHC8Q6NZY4 707 aaKnown RBP16.93■□□□□ 0.3
UPF3A-206ENST00000480362 HOMEZQ8IX15 550 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 MINDY1Q8N5J2 469 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 ABHD11Q8NFV4 315 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 OR2L3Q8NG85 312 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 OR4C6Q8NH72 309 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 FLVCR1-AS1Q8TAF5 88 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 CCT6BQ92526 530 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 MTFMTQ96DP5 389 aaKnown RBP16.93■□□□□ 0.3
UPF3A-206ENST00000480362 C19orf60Q96EN9 201 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 RILPQ96NA2 401 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 PRAP1Q96NZ9 151 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 OR2A14Q96R47 310 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 EFCAB11Q9BUY7 163 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 MRPS30Q9NP92 439 aaKnown RBP16.93■□□□□ 0.3
UPF3A-206ENST00000480362 GEMIN8Q9NWZ8 242 aaKnown RBP16.93■□□□□ 0.3
UPF3A-206ENST00000480362 ZNF490Q9ULM2 529 aaPredicted RBP16.93■□□□□ 0.3
UPF3A-206ENST00000480362 SNX6Q9UNH7 406 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 ENTPD2Q9Y5L3 495 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 PTGDR2Q9Y5Y4 395 aa16.93■□□□□ 0.3
UPF3A-206ENST00000480362 OR5K3A6NET4 321 aa16.92■□□□□ 0.3
UPF3A-206ENST00000480362 C2orf74A8MZ97 194 aa16.92■□□□□ 0.3
UPF3A-206ENST00000480362 SDHDO14521 159 aa16.92■□□□□ 0.3
UPF3A-206ENST00000480362 PCDHGA12O60330 932 aa16.92■□□□□ 0.3
UPF3A-206ENST00000480362 ULK1O75385 1050 aa16.92■□□□□ 0.3
UPF3A-206ENST00000480362 UBXN7O94888 489 aa16.92■□□□□ 0.3
UPF3A-206ENST00000480362 UGT2B7P16662 529 aa16.92■□□□□ 0.3
UPF3A-206ENST00000480362 AMD1P17707 334 aa16.92■□□□□ 0.3
UPF3A-206ENST00000480362 EPHA3P29320 983 aa16.92■□□□□ 0.3
UPF3A-206ENST00000480362 ABRAXAS2Q15018 415 aa16.92■□□□□ 0.3
UPF3A-206ENST00000480362 HIST2H2ACQ16777 129 aaPredicted RBP16.92■□□□□ 0.3
UPF3A-206ENST00000480362 PAGE2BQ5JRK9 111 aa16.92■□□□□ 0.3
UPF3A-206ENST00000480362 KIAA1614Q5VZ46 1190 aa16.92■□□□□ 0.3
UPF3A-206ENST00000480362 HIST2H2AA3Q6FI13 130 aa16.92■□□□□ 0.3
UPF3A-206ENST00000480362 ARMC6Q6NXE6 501 aa16.92■□□□□ 0.3
UPF3A-206ENST00000480362 OOSP2Q86WS3 158 aa16.92■□□□□ 0.3
UPF3A-206ENST00000480362 FAM129CQ86XR2 697 aa16.92■□□□□ 0.3
UPF3A-206ENST00000480362 EID2Q8N6I1 236 aa16.92■□□□□ 0.3
UPF3A-206ENST00000480362 ANKS4BQ8N8V4 417 aa16.92■□□□□ 0.3
UPF3A-206ENST00000480362 RSC1A1Q92681 617 aa16.92■□□□□ 0.3
UPF3A-206ENST00000480362 APOLD1Q96LR9 279 aa16.92■□□□□ 0.3
UPF3A-206ENST00000480362 C3orf30Q96M34 536 aa16.92■□□□□ 0.3
UPF3A-206ENST00000480362 OR52B2Q96RD2 323 aa16.92■□□□□ 0.3
UPF3A-206ENST00000480362 ELOVL6Q9H5J4 265 aa16.92■□□□□ 0.3
UPF3A-206ENST00000480362 SLC6A20Q9NP91 592 aa16.92■□□□□ 0.3
UPF3A-206ENST00000480362 PFDN4Q9NQP4 134 aa16.92■□□□□ 0.3
UPF3A-206ENST00000480362 FARSBQ9NSD9 589 aaKnown RBP16.92■□□□□ 0.3
UPF3A-206ENST00000480362 PADI4Q9UM07 663 aa16.92■□□□□ 0.3
UPF3A-206ENST00000480362 IGKV1-8A0A0C4DH67 115 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 H0YIV9 168 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 SIGLEC6O43699 453 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 NUDT21O43809 227 aaKnown RBP16.91■□□□□ 0.3
UPF3A-206ENST00000480362 PDYNP01213 254 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 PROS1P07225 676 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 GLB1P16278 677 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 CXCR2P25025 360 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 ALDH4A1P30038 563 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 NEK2P51955 445 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 IFT88Q13099 833 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 TUBB3Q13509 450 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 FRG2Q64ET8 278 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 MED27Q6P2C8 311 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 KLHL35Q6PF15 583 aa16.91■□□□□ 0.3
UPF3A-206ENST00000480362 ACAD11Q709F0 780 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms