RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 PLCL2Q9UPR0 1127 aa18.96■□□□□ 0.63
LIME1-205ENST00000480139 KLHL20Q9Y2M5 609 aa18.96■□□□□ 0.63
LIME1-205ENST00000480139 B3GALT1Q9Y5Z6 326 aa18.96■□□□□ 0.63
LIME1-205ENST00000480139 CHD8Q9HCK8 2581 aa18.95■□□□□ 0.62
LIME1-205ENST00000480139 A0A1W2PPM1 405 aa18.95■□□□□ 0.62
LIME1-205ENST00000480139 TLDC2A0PJX2 215 aa18.95■□□□□ 0.62
LIME1-205ENST00000480139 C1QTNF9BB2RNN3 333 aa18.95■□□□□ 0.62
LIME1-205ENST00000480139 SUPT3HB4E1H0 165 aa18.95■□□□□ 0.62
LIME1-205ENST00000480139 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.95■□□□□ 0.62
LIME1-205ENST00000480139 UBXN8O00124 270 aa18.95■□□□□ 0.62
LIME1-205ENST00000480139 SUPT3HO75486 399 aa18.95■□□□□ 0.62
LIME1-205ENST00000480139 C1QTNF9P0C862 333 aa18.95■□□□□ 0.62
LIME1-205ENST00000480139 PYGBP11216 843 aa18.95■□□□□ 0.62
LIME1-205ENST00000480139 RNF44Q7L0R7 432 aa18.95■□□□□ 0.62
LIME1-205ENST00000480139 THOC6Q86W42 341 aaKnown RBP18.95■□□□□ 0.62
LIME1-205ENST00000480139 EXT2Q93063 718 aa18.95■□□□□ 0.62
LIME1-205ENST00000480139 MRPL46Q9H2W6 279 aaKnown RBP18.95■□□□□ 0.62
LIME1-205ENST00000480139 ABCF3Q9NUQ8 709 aa18.95■□□□□ 0.62
LIME1-205ENST00000480139 FOXJ2Q9P0K8 574 aa18.95■□□□□ 0.62
LIME1-205ENST00000480139 XPR1Q9UBH6 696 aa18.95■□□□□ 0.62
LIME1-205ENST00000480139 DCDC2Q9UHG0 476 aa18.95■□□□□ 0.62
LIME1-205ENST00000480139 PILRAQ9UKJ1 303 aa18.95■□□□□ 0.62
LIME1-205ENST00000480139 MAP2K7O14733 419 aa18.94■□□□□ 0.62
LIME1-205ENST00000480139 STK16O75716 305 aa18.94■□□□□ 0.62
LIME1-205ENST00000480139 EZRP15311 586 aaKnown RBP18.94■□□□□ 0.62
LIME1-205ENST00000480139 ZNF844Q08AG5 666 aa18.94■□□□□ 0.62
LIME1-205ENST00000480139 METTL2BQ6P1Q9 378 aaKnown RBP18.94■□□□□ 0.62
LIME1-205ENST00000480139 LRIG3Q6UXM1 1119 aa18.94■□□□□ 0.62
LIME1-205ENST00000480139 CROCCP2Q86T23 111 aa18.94■□□□□ 0.62
LIME1-205ENST00000480139 ABHD11Q8NFV4 315 aa18.94■□□□□ 0.62
LIME1-205ENST00000480139 SNIP1Q8TAD8 396 aaKnown RBP18.94■□□□□ 0.62
LIME1-205ENST00000480139 FGF11Q92914 225 aa18.94■□□□□ 0.62
LIME1-205ENST00000480139 ALKBH8Q96BT7 664 aaKnown RBP18.94■□□□□ 0.62
LIME1-205ENST00000480139 CTRCQ99895 268 aa18.94■□□□□ 0.62
LIME1-205ENST00000480139 CD244Q9BZW8 370 aa18.94■□□□□ 0.62
LIME1-205ENST00000480139 SPRY4Q9C004 299 aa18.94■□□□□ 0.62
LIME1-205ENST00000480139 CUEDC1Q9NWM3 386 aaPredicted RBP18.94■□□□□ 0.62
LIME1-205ENST00000480139 GPRC5BQ9NZH0 403 aa18.94■□□□□ 0.62
LIME1-205ENST00000480139 SERTAD3Q9UJW9 196 aa18.94■□□□□ 0.62
LIME1-205ENST00000480139 SLC22A14Q9Y267 594 aa18.94■□□□□ 0.62
LIME1-205ENST00000480139 KCNE2Q9Y6J6 123 aa18.94■□□□□ 0.62
LIME1-205ENST00000480139 ASPMQ8IZT6 3477 aa18.94■□□□□ 0.62
LIME1-205ENST00000480139 TMEM150CB9EJG8 249 aa18.93■□□□□ 0.62
LIME1-205ENST00000480139 H3BMH7 237 aa18.93■□□□□ 0.62
LIME1-205ENST00000480139 GOLGA8RI6L899 631 aa18.93■□□□□ 0.62
LIME1-205ENST00000480139 CTSVO60911 334 aa18.93■□□□□ 0.62
LIME1-205ENST00000480139 GLRA3O75311 464 aa18.93■□□□□ 0.62
LIME1-205ENST00000480139 WDR47O94967 919 aa18.93■□□□□ 0.62
LIME1-205ENST00000480139 ALDH18A1P54886 795 aaKnown RBP18.93■□□□□ 0.62
LIME1-205ENST00000480139 ITGA1P56199 1179 aa18.93■□□□□ 0.62
LIME1-205ENST00000480139 PCBP4P57723 403 aaKnown RBP18.93■□□□□ 0.62
LIME1-205ENST00000480139 SETDB1Q15047 1291 aa18.93■□□□□ 0.62
LIME1-205ENST00000480139 LRRC70Q7Z2Q7 622 aa18.93■□□□□ 0.62
LIME1-205ENST00000480139 TRABD2AQ86V40 505 aa18.93■□□□□ 0.62
LIME1-205ENST00000480139 TMEM151AQ8N4L1 468 aa18.93■□□□□ 0.62
LIME1-205ENST00000480139 OR1L3Q8NH93 324 aa18.93■□□□□ 0.62
LIME1-205ENST00000480139 SLC5A11Q8WWX8 675 aa18.93■□□□□ 0.62
LIME1-205ENST00000480139 N4BP2L2Q92802 583 aaPredicted RBP18.93■□□□□ 0.62
LIME1-205ENST00000480139 NEIL2Q969S2 332 aa18.93■□□□□ 0.62
LIME1-205ENST00000480139 SCYL1Q96KG9 808 aa18.93■□□□□ 0.62
LIME1-205ENST00000480139 ZNF285Q96NJ3 590 aa18.93■□□□□ 0.62
LIME1-205ENST00000480139 ZFYVE21Q9BQ24 234 aa18.93■□□□□ 0.62
LIME1-205ENST00000480139 CAPS2Q9BXY5 557 aa18.93■□□□□ 0.62
LIME1-205ENST00000480139 DNAJC11Q9NVH1 559 aa18.93■□□□□ 0.62
LIME1-205ENST00000480139 MKS1Q9NXB0 559 aa18.93■□□□□ 0.62
LIME1-205ENST00000480139 SH2B3Q9UQQ2 575 aa18.93■□□□□ 0.62
LIME1-205ENST00000480139 DYRK1BQ9Y463 629 aa18.93■□□□□ 0.62
LIME1-205ENST00000480139 TMEM184BQ9Y519 407 aaPredicted RBP18.93■□□□□ 0.62
LIME1-205ENST00000480139 SDK2Q58EX2 2172 aa18.92■□□□□ 0.62
LIME1-205ENST00000480139 H7BY64 318 aa18.92■□□□□ 0.62
LIME1-205ENST00000480139 TK2O00142 265 aa18.92■□□□□ 0.62
LIME1-205ENST00000480139 HCRTR1O43613 425 aa18.92■□□□□ 0.62
LIME1-205ENST00000480139 SRPX2O60687 465 aaPredicted RBP18.92■□□□□ 0.62
LIME1-205ENST00000480139 GFAPP14136 432 aa18.92■□□□□ 0.62
LIME1-205ENST00000480139 KRT4P19013 534 aa18.92■□□□□ 0.62
LIME1-205ENST00000480139 GNAZP19086 355 aa18.92■□□□□ 0.62
LIME1-205ENST00000480139 CRHR1P34998 444 aa18.92■□□□□ 0.62
LIME1-205ENST00000480139 GDF5P43026 501 aa18.92■□□□□ 0.62
LIME1-205ENST00000480139 CCT5P48643 541 aa18.92■□□□□ 0.62
LIME1-205ENST00000480139 HSPA7P48741 367 aa18.92■□□□□ 0.62
LIME1-205ENST00000480139 CSNK1G2P78368 415 aa18.92■□□□□ 0.62
LIME1-205ENST00000480139 SLC18A2Q05940 514 aa18.92■□□□□ 0.62
LIME1-205ENST00000480139 C18orf21Q32NC0 220 aaPredicted RBP18.92■□□□□ 0.62
LIME1-205ENST00000480139 KRT71Q3SY84 523 aa18.92■□□□□ 0.62
LIME1-205ENST00000480139 PWWP2BQ6NUJ5 590 aa18.92■□□□□ 0.62
LIME1-205ENST00000480139 MCATQ8IVS2 390 aaKnown RBP18.92■□□□□ 0.62
LIME1-205ENST00000480139 KDF1Q8NAX2 398 aaPredicted RBP18.92■□□□□ 0.62
LIME1-205ENST00000480139 OR4K1Q8NGD4 311 aa18.92■□□□□ 0.62
LIME1-205ENST00000480139 PRAP1Q96NZ9 151 aa18.92■□□□□ 0.62
LIME1-205ENST00000480139 ZIM3Q96PE6 472 aa18.92■□□□□ 0.62
LIME1-205ENST00000480139 SARGQ9BW04 601 aa18.92■□□□□ 0.62
LIME1-205ENST00000480139 PELI2Q9HAT8 420 aa18.92■□□□□ 0.62
LIME1-205ENST00000480139 TMEM216Q9P0N5 145 aa18.92■□□□□ 0.62
LIME1-205ENST00000480139 CPSF2Q9P2I0 782 aaKnown RBP18.92■□□□□ 0.62
LIME1-205ENST00000480139 PCDHB3Q9Y5E6 796 aa18.92■□□□□ 0.62
LIME1-205ENST00000480139 TNPO3Q9Y5L0 923 aaKnown RBP18.92■□□□□ 0.62
LIME1-205ENST00000480139 IGF2RP11717 2491 aa18.91■□□□□ 0.62
LIME1-205ENST00000480139 FOXO6A8MYZ6 492 aa18.91■□□□□ 0.62
LIME1-205ENST00000480139 STMND1H3BQB6 276 aa18.91■□□□□ 0.62
LIME1-205ENST00000480139 STX16-NPEPL1H3BU86 382 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms