RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 NCEH1Q6PIU2 408 aa13.96□□□□□ -0.18
COL20A1-206ENST00000479501 SLC15A3Q8IY34 581 aa13.96□□□□□ -0.18
COL20A1-206ENST00000479501 C7orf61Q8IZ16 206 aa13.96□□□□□ -0.18
COL20A1-206ENST00000479501 CELF5Q8N6W0 485 aaKnown RBP13.96□□□□□ -0.18
COL20A1-206ENST00000479501 PCBD2Q9H0N5 130 aa13.96□□□□□ -0.18
COL20A1-206ENST00000479501 EQTNQ9NQ60 294 aa13.96□□□□□ -0.18
COL20A1-206ENST00000479501 CASKO14936 926 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 OR10H2O60403 315 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 ADAMTS4O75173 837 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 POP7O75817 140 aaKnown RBP13.95□□□□□ -0.18
COL20A1-206ENST00000479501 CCNDBP1O95273 360 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 PLA2G16P53816 162 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 PTGR1Q14914 329 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 ZNHIT3Q15649 155 aaPredicted RBP13.95□□□□□ -0.18
COL20A1-206ENST00000479501 ACVR1CQ8NER5 493 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 ADAMTS15Q8TE58 950 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 L3HYPDHQ96EM0 354 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 LRCH3Q96II8 777 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 SLITRK2Q9H156 845 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 EXD2Q9NVH0 621 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 SLCO3A1Q9UIG8 710 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 RIMKLBQ9ULI2 386 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 PCP4L1A6NKN8 68 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 DRGXA6NNA5 263 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 LDB2O43679 373 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 UGT2B17O75795 530 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 ERVK-21P61565 698 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 HSPB3Q12988 150 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 RAB33AQ14088 237 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 PDGFRLQ15198 375 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 ZNF829Q3KNS6 432 aaPredicted RBP13.95□□□□□ -0.18
COL20A1-206ENST00000479501 ZNF544Q6NX49 715 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 OR52B6Q8NGF0 335 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 GRPEL2Q8TAA5 225 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 AIG1Q9NVV5 245 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 UBE2QL1A1L167 161 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 ABHD18Q0P651 414 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 GRIK2Q13002 908 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 KCTD11Q693B1 232 aa13.95□□□□□ -0.18
COL20A1-206ENST00000479501 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.95□□□□□ -0.18
COL20A1-206ENST00000479501 A0A1W2PRB8 838 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 FADS2P1A8MWK0 482 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 ENTPD1P49961 510 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 TMPRSS11AQ6ZMR5 421 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 RGL4Q8IZJ4 473 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 APCDD1Q8J025 514 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 TRPV1Q8NER1 839 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 OR52L1Q8NGH7 329 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 KLK6Q92876 244 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 FUBP1Q96AE4 644 aaKnown RBP13.94□□□□□ -0.18
COL20A1-206ENST00000479501 C12orf66Q96MD2 445 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 C20orf27Q9GZN8 174 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 TMEM138Q9NPI0 162 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 TLR9Q9NR96 1032 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 GON4LQ3T8J9 2241 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 BMP7P18075 431 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 CST5P28325 142 aaPredicted RBP13.94□□□□□ -0.18
COL20A1-206ENST00000479501 TM4SF4P48230 202 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 HLA-DQA1Q5Y7H0 255 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 THOC7Q6I9Y2 204 aaKnown RBP13.94□□□□□ -0.18
COL20A1-206ENST00000479501 OR8H1Q8NGG4 311 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 MZB1Q8WU39 189 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 PTERQ96BW5 349 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 STON1Q9Y6Q2 735 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 COLEC10Q9Y6Z7 277 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 A0A1W2PPW3 197 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 ACRV1P26436 265 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 MAT2AP31153 395 aaKnown RBP13.94□□□□□ -0.18
COL20A1-206ENST00000479501 CCR4P51679 360 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 CASP9P55211 416 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 TEX47Q8TBZ9 253 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 POF1BQ8WVV4 589 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 DMRTB1Q96MA1 342 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 TRPV5Q9NQA5 729 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 THSD7AQ9UPZ6 1657 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 GMEB1Q9Y692 573 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 PGRMC2O15173 223 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 BDKRB1P46663 353 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 TAS2R41P59536 307 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 MADCAM1Q13477 382 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 SPIN4Q56A73 249 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 PIGGQ5H8A4 983 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 PLEKHS1Q5SXH7 462 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 BLOC1S3Q6QNY0 202 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 CNTN4Q8IWV2 1026 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 C12orf43Q96C57 262 aaKnown RBP13.94□□□□□ -0.18
COL20A1-206ENST00000479501 CMTM7Q96FZ5 175 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 SLC39A13Q96H72 371 aa13.94□□□□□ -0.18
COL20A1-206ENST00000479501 ZNF99A8MXY4 864 aaPredicted RBP13.93□□□□□ -0.18
COL20A1-206ENST00000479501 LEFTY1O75610 366 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 CREG1O75629 220 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 CHRM1P11229 460 aaPredicted RBP13.93□□□□□ -0.18
COL20A1-206ENST00000479501 PREPP48147 710 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 SP140Q13342 867 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 GPM6BQ13491 265 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 ZNF423Q2M1K9 1284 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 PRAMEF14Q5SWL7 426 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 PRAMEF13Q5VWM6 474 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 GPR65Q8IYL9 337 aa13.93□□□□□ -0.18
COL20A1-206ENST00000479501 HDDC3Q8N4P3 179 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms