RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 PANX1Q96RD7 426 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 NRTNQ99748 197 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 SLC29A3Q9BZD2 475 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 RASSF1Q9NS23 344 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 ERVK-18Q9QC07 812 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 SNX6Q9UNH7 406 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 HS3ST2Q9Y278 367 aa10.48□□□□□ -0.73
VPS52-217ENST00000478934 PLXNB3Q9ULL4 1909 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 GOLGA4Q13439 2230 aaKnown RBP10.47□□□□□ -0.73
VPS52-217ENST00000478934 C16orf96A6NNT2 1141 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 ZBBXA8MT70 800 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 FPGTO14772 594 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 TSPAN6O43657 245 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 ERN1O75460 977 aaKnown RBP10.47□□□□□ -0.73
VPS52-217ENST00000478934 CTSLP07711 333 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 OCM2P0CE71 109 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 OCMP0CE72 109 aaPredicted RBP10.47□□□□□ -0.73
VPS52-217ENST00000478934 IDUAP35475 653 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 MAPK8P45983 427 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 MNX1P50219 401 aaPredicted RBP10.47□□□□□ -0.73
VPS52-217ENST00000478934 RAD23AP54725 363 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 PHEXP78562 749 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 VLDLRP98155 873 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 IRF8Q02556 426 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 NAE1Q13564 534 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 CBX2Q14781 532 aaPredicted RBP10.47□□□□□ -0.73
VPS52-217ENST00000478934 CYP2A13Q16696 494 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 PERM1Q5SV97 790 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 ATG9BQ674R7 924 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 DCDC5Q6ZRR9 648 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 ADIPOR2Q86V24 386 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 SYT12Q8IV01 421 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 CROCCP3Q8IVE0 287 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 EID3Q8N140 333 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 TMEM132CQ8N3T6 1108 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 CPXM2Q8N436 756 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 DDHD1Q8NEL9 900 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 SH3KBP1Q96B97 665 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 OR4K3Q96R72 315 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 RC3H2Q9HBD1 1191 aaKnown RBP10.47□□□□□ -0.73
VPS52-217ENST00000478934 C8orf4Q9NR00 106 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 AASDHPPTQ9NRN7 309 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 TMEM39AQ9NV64 488 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 DNAJC11Q9NVH1 559 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 SELENONQ9NZV5 590 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 NINQ8N4C6 2090 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 HIDE1A8MVS5 230 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 FAM220BPB1ANY3 271 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 GFYI3L273 518 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 CLIC1O00299 241 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 NUAK1O60285 661 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 FGF18O76093 207 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 POP4O95707 220 aaKnown RBP10.47□□□□□ -0.73
VPS52-217ENST00000478934 NTRK1P04629 796 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 TTKP33981 857 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 DAPP51397 102 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 MESP2Q0VG99 397 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 DOC2AQ14183 400 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 GBX1Q14549 363 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 SKIV2LQ15477 1246 aaKnown RBP10.47□□□□□ -0.73
VPS52-217ENST00000478934 TEAD2Q15562 447 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 IER5LQ5T953 404 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 TTC23Q5W5X9 447 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 FAM180BQ6P0A1 224 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 CNKSR3Q6P9H4 555 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 GDPD4Q6W3E5 623 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 LRRC70Q7Z2Q7 622 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 IGFN1Q86VF2 1251 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 TMCO5AQ8N6Q1 288 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 ARL10Q8N8L6 244 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 PJA1Q8NG27 643 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 NDNFQ8TB73 568 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 FKBP10Q96AY3 582 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 NODALQ96S42 347 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 SH3GL1Q99961 368 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 RBM4BQ9BQ04 359 aaKnown RBP10.47□□□□□ -0.73
VPS52-217ENST00000478934 RBM4Q9BWF3 364 aaKnown RBP10.47□□□□□ -0.73
VPS52-217ENST00000478934 FAM83DQ9H4H8 585 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 GPBP1L1Q9HC44 474 aaPredicted RBP10.47□□□□□ -0.73
VPS52-217ENST00000478934 ASIC5Q9NY37 505 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 PSME2Q9UL46 239 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 ZNF451Q9Y4E5 1061 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 WNT6Q9Y6F9 365 aa10.47□□□□□ -0.73
VPS52-217ENST00000478934 OBSL1O75147 1896 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 VCANP13611 3396 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 ANTXRLA6NF34 631 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 MAGEB17A8MXT2 336 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 SAP18O00422 153 aaKnown RBP10.46□□□□□ -0.73
VPS52-217ENST00000478934 BCKDKO14874 412 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 SCN2BO60939 215 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 KCNK5O95279 499 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 CXCL14O95715 111 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 ABCB1P08183 1280 aaPredicted RBP10.46□□□□□ -0.73
VPS52-217ENST00000478934 CBSLP0DN79 551 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 PABPC1P11940 636 aaKnown RBP10.46□□□□□ -0.73
VPS52-217ENST00000478934 TYRP14679 529 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 ACPPP15309 386 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 TNFRSF1BP20333 461 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 GSTM2P28161 218 aa10.46□□□□□ -0.73
VPS52-217ENST00000478934 CBSP35520 551 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms