RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 SLC26A3P40879 764 aa16.29■□□□□ 0.2
VIM-204ENST00000478746 ART1P52961 327 aa16.29■□□□□ 0.2
VIM-204ENST00000478746 EMP3P54852 163 aa16.29■□□□□ 0.2
VIM-204ENST00000478746 KCTD11Q693B1 232 aa16.29■□□□□ 0.2
VIM-204ENST00000478746 TMEM205Q6UW68 189 aa16.29■□□□□ 0.2
VIM-204ENST00000478746 RNF44Q7L0R7 432 aa16.29■□□□□ 0.2
VIM-204ENST00000478746 RAB42Q8N4Z0 105 aa16.29■□□□□ 0.2
VIM-204ENST00000478746 OR2L3Q8NG85 312 aa16.29■□□□□ 0.2
VIM-204ENST00000478746 RAD51AP1Q96B01 352 aa16.29■□□□□ 0.2
VIM-204ENST00000478746 MVB12AQ96EY5 273 aa16.29■□□□□ 0.2
VIM-204ENST00000478746 MMABQ96EY8 250 aaPredicted RBP16.29■□□□□ 0.2
VIM-204ENST00000478746 ZNF354BQ96LW1 612 aa16.29■□□□□ 0.2
VIM-204ENST00000478746 FAM118BQ9BPY3 351 aa16.29■□□□□ 0.2
VIM-204ENST00000478746 ZFYVE21Q9BQ24 234 aa16.29■□□□□ 0.2
VIM-204ENST00000478746 CARD6Q9BX69 1037 aa16.29■□□□□ 0.2
VIM-204ENST00000478746 KLHL1Q9NR64 748 aa16.29■□□□□ 0.2
VIM-204ENST00000478746 PIH1D1Q9NWS0 290 aaKnown RBP16.29■□□□□ 0.2
VIM-204ENST00000478746 MKL2Q9ULH7 1088 aa16.29■□□□□ 0.2
VIM-204ENST00000478746 SCN2AQ99250 2005 aa16.29■□□□□ 0.2
VIM-204ENST00000478746 IQCF5A8MTL0 148 aa16.28■□□□□ 0.2
VIM-204ENST00000478746 H0YGG7 62 aa16.28■□□□□ 0.2
VIM-204ENST00000478746 ASNA1O43681 348 aa16.28■□□□□ 0.2
VIM-204ENST00000478746 SLCO2B1O94956 709 aa16.28■□□□□ 0.2
VIM-204ENST00000478746 CD99P14209 185 aa16.28■□□□□ 0.2
VIM-204ENST00000478746 ABOP16442 354 aa16.28■□□□□ 0.2
VIM-204ENST00000478746 COPS2P61201 443 aa16.28■□□□□ 0.2
VIM-204ENST00000478746 ARF3P61204 181 aaPredicted RBP16.28■□□□□ 0.2
VIM-204ENST00000478746 PARP6Q2NL67 630 aa16.28■□□□□ 0.2
VIM-204ENST00000478746 AMER3Q8N944 861 aa16.28■□□□□ 0.2
VIM-204ENST00000478746 OR2A1Q8NGT9 310 aa16.28■□□□□ 0.2
VIM-204ENST00000478746 AGAP11Q8TF27 550 aa16.28■□□□□ 0.2
VIM-204ENST00000478746 PHF10Q8WUB8 498 aaKnown RBP16.28■□□□□ 0.2
VIM-204ENST00000478746 SDCCAG3Q96C92 435 aa16.28■□□□□ 0.2
VIM-204ENST00000478746 TREX2Q9BQ50 279 aaPredicted RBP16.28■□□□□ 0.2
VIM-204ENST00000478746 LRRC40Q9H9A6 602 aa16.28■□□□□ 0.2
VIM-204ENST00000478746 MAP1AP78559 2803 aaPredicted RBP16.28■□□□□ 0.2
VIM-204ENST00000478746 OR2A25A4D2G3 310 aa16.27■□□□□ 0.2
VIM-204ENST00000478746 E9PLN8 166 aa16.27■□□□□ 0.2
VIM-204ENST00000478746 TPM3P06753 285 aa16.27■□□□□ 0.2
VIM-204ENST00000478746 C8orf89P0DMQ9 161 aa16.27■□□□□ 0.2
VIM-204ENST00000478746 HOXB4P17483 251 aaPredicted RBP16.27■□□□□ 0.2
VIM-204ENST00000478746 AOAHP28039 575 aa16.27■□□□□ 0.2
VIM-204ENST00000478746 EEF1DP29692 281 aaKnown RBP16.27■□□□□ 0.2
VIM-204ENST00000478746 HADHBP55084 474 aaKnown RBP16.27■□□□□ 0.2
VIM-204ENST00000478746 TUBA3CQ13748 450 aa16.27■□□□□ 0.2
VIM-204ENST00000478746 CCDC38Q502W7 563 aa16.27■□□□□ 0.2
VIM-204ENST00000478746 ACER2Q5QJU3 275 aa16.27■□□□□ 0.2
VIM-204ENST00000478746 FCRLBQ6BAA4 426 aa16.27■□□□□ 0.2
VIM-204ENST00000478746 TUBA3EQ6PEY2 450 aa16.27■□□□□ 0.2
VIM-204ENST00000478746 DOLPP1Q86YN1 238 aa16.27■□□□□ 0.2
VIM-204ENST00000478746 BEST3Q8N1M1 668 aa16.27■□□□□ 0.2
VIM-204ENST00000478746 GSDMBQ8TAX9 411 aa16.27■□□□□ 0.2
VIM-204ENST00000478746 HMGCLL1Q8TB92 370 aa16.27■□□□□ 0.2
VIM-204ENST00000478746 LKAAEAR1Q8TD35 194 aa16.27■□□□□ 0.2
VIM-204ENST00000478746 METTL21AQ8WXB1 218 aa16.27■□□□□ 0.2
VIM-204ENST00000478746 KRT35Q92764 455 aa16.27■□□□□ 0.2
VIM-204ENST00000478746 HDAC10Q969S8 669 aa16.27■□□□□ 0.2
VIM-204ENST00000478746 SIGLEC12Q96PQ1 595 aa16.27■□□□□ 0.2
VIM-204ENST00000478746 VKORC1Q9BQB6 163 aa16.27■□□□□ 0.2
VIM-204ENST00000478746 DPH7Q9BTV6 452 aa16.27■□□□□ 0.2
VIM-204ENST00000478746 COQ3Q9NZJ6 369 aa16.27■□□□□ 0.2
VIM-204ENST00000478746 TTC7AQ9ULT0 858 aaPredicted RBP16.27■□□□□ 0.2
VIM-204ENST00000478746 EFR3BQ9Y2G0 817 aa16.27■□□□□ 0.2
VIM-204ENST00000478746 VPS26AO75436 327 aa16.26■□□□□ 0.19
VIM-204ENST00000478746 SEC24DO94855 1032 aaPredicted RBP16.26■□□□□ 0.19
VIM-204ENST00000478746 GOT2P00505 430 aaKnown RBP16.26■□□□□ 0.19
VIM-204ENST00000478746 CD46P15529 392 aa16.26■□□□□ 0.19
VIM-204ENST00000478746 CMPK1P30085 196 aa16.26■□□□□ 0.19
VIM-204ENST00000478746 PPARGP37231 505 aaPredicted RBP16.26■□□□□ 0.19
VIM-204ENST00000478746 CD96P40200 585 aa16.26■□□□□ 0.19
VIM-204ENST00000478746 YBX1P67809 324 aaKnown RBP16.26■□□□□ 0.19
VIM-204ENST00000478746 NAA25Q14CX7 972 aa16.26■□□□□ 0.19
VIM-204ENST00000478746 TMED2Q15363 201 aa16.26■□□□□ 0.19
VIM-204ENST00000478746 SYT16Q17RD7 645 aa16.26■□□□□ 0.19
VIM-204ENST00000478746 BTBD16Q32M84 506 aa16.26■□□□□ 0.19
VIM-204ENST00000478746 GARNL3Q5VVW2 1013 aa16.26■□□□□ 0.19
VIM-204ENST00000478746 H3F3CQ6NXT2 135 aa16.26■□□□□ 0.19
VIM-204ENST00000478746 LRRC8BQ6P9F7 803 aa16.26■□□□□ 0.19
VIM-204ENST00000478746 C3P1Q6ZMU1 363 aa16.26■□□□□ 0.19
VIM-204ENST00000478746 EID3Q8N140 333 aa16.26■□□□□ 0.19
VIM-204ENST00000478746 KRT222Q8N1A0 295 aa16.26■□□□□ 0.19
VIM-204ENST00000478746 CSNK1A1LQ8N752 337 aa16.26■□□□□ 0.19
VIM-204ENST00000478746 MDS2Q8NDY4 140 aa16.26■□□□□ 0.19
VIM-204ENST00000478746 UTP23Q9BRU9 249 aaKnown RBP16.26■□□□□ 0.19
VIM-204ENST00000478746 TMEM121Q9BTD3 319 aa16.26■□□□□ 0.19
VIM-204ENST00000478746 TMUB1Q9BVT8 246 aa16.26■□□□□ 0.19
VIM-204ENST00000478746 HES7Q9BYE0 225 aa16.26■□□□□ 0.19
VIM-204ENST00000478746 ANKRD10Q9NXR5 420 aa16.26■□□□□ 0.19
VIM-204ENST00000478746 RUVBL1Q9Y265 456 aaKnown RBP16.26■□□□□ 0.19
VIM-204ENST00000478746 MRFAP1Q9Y605 127 aa16.26■□□□□ 0.19
VIM-204ENST00000478746 ANKHD1Q8IWZ3 2542 aaKnown RBP16.26■□□□□ 0.19
VIM-204ENST00000478746 A0A0A6YYC8 382 aaPredicted RBP16.25■□□□□ 0.19
VIM-204ENST00000478746 IGHV3-20A0A0C4DH32 117 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 A0A1W2PPV9 198 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 SYCE3A1L190 88 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 ASPDHA6ND91 283 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 I3L1I5 382 aaPredicted RBP16.25■□□□□ 0.19
VIM-204ENST00000478746 PRRG2O14669 202 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 PSMD3O43242 534 aa16.25■□□□□ 0.19
VIM-204ENST00000478746 ZNHIT1O43257 154 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms