RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 RARRES3Q9UL19 164 aa13.99□□□□□ -0.17
USP11-207ENST00000478596 PABPN1LA6NDY0 278 aaKnown RBP13.98□□□□□ -0.17
USP11-207ENST00000478596 CHUKO15111 745 aa13.98□□□□□ -0.17
USP11-207ENST00000478596 KPNA5O15131 536 aa13.98□□□□□ -0.17
USP11-207ENST00000478596 CDH16O75309 829 aa13.98□□□□□ -0.17
USP11-207ENST00000478596 POP7O75817 140 aaKnown RBP13.98□□□□□ -0.17
USP11-207ENST00000478596 RASSF9O75901 435 aa13.98□□□□□ -0.17
USP11-207ENST00000478596 GSTM1P09488 218 aa13.98□□□□□ -0.17
USP11-207ENST00000478596 DRD2P14416 443 aa13.98□□□□□ -0.17
USP11-207ENST00000478596 STMN1P16949 149 aa13.98□□□□□ -0.17
USP11-207ENST00000478596 NELFEP18615 380 aaKnown RBP13.98□□□□□ -0.17
USP11-207ENST00000478596 ADARP55265 1226 aaKnown RBP13.98□□□□□ -0.17
USP11-207ENST00000478596 GSTM4Q03013 218 aa13.98□□□□□ -0.17
USP11-207ENST00000478596 HSPA14Q0VDF9 509 aa13.98□□□□□ -0.17
USP11-207ENST00000478596 CASP8Q14790 479 aa13.98□□□□□ -0.17
USP11-207ENST00000478596 CEP85LQ5SZL2 805 aa13.98□□□□□ -0.17
USP11-207ENST00000478596 HDXQ7Z353 690 aa13.98□□□□□ -0.17
USP11-207ENST00000478596 ZBTB2Q8N680 514 aa13.98□□□□□ -0.17
USP11-207ENST00000478596 SIDT2Q8NBJ9 832 aaKnown RBP13.98□□□□□ -0.17
USP11-207ENST00000478596 DCAKDQ8WVC6 231 aa13.98□□□□□ -0.17
USP11-207ENST00000478596 TM9SF4Q92544 642 aa13.98□□□□□ -0.17
USP11-207ENST00000478596 KCNJ9Q92806 393 aa13.98□□□□□ -0.17
USP11-207ENST00000478596 ZBTB9Q96C00 473 aa13.98□□□□□ -0.17
USP11-207ENST00000478596 TSNARE1Q96NA8 513 aa13.98□□□□□ -0.17
USP11-207ENST00000478596 BIRC8Q96P09 236 aa13.98□□□□□ -0.17
USP11-207ENST00000478596 GPR21Q99679 349 aa13.98□□□□□ -0.17
USP11-207ENST00000478596 CAB39LQ9H9S4 337 aa13.98□□□□□ -0.17
USP11-207ENST00000478596 CTNNAL1Q9UBT7 734 aa13.98□□□□□ -0.17
USP11-207ENST00000478596 SNX7Q9UNH6 387 aa13.98□□□□□ -0.17
USP11-207ENST00000478596 KLHL33A6NCF5 533 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 MGAT4DA6NG13 374 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 OR5K4A6NMS3 321 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 TRIM49D1C9J1S8 452 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 KLHL41O60662 606 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 UBXN7O94888 489 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 SNRPAP09012 282 aaKnown RBP13.97□□□□□ -0.17
USP11-207ENST00000478596 RAB40ALP0C0E4 278 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 F3P13726 295 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 CD99P14209 185 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 IDSP22304 550 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 GABRB3P28472 473 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 HALP42357 657 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 PREPP48147 710 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 RGS4P49798 205 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 UBE2IP63279 158 aaKnown RBP13.97□□□□□ -0.17
USP11-207ENST00000478596 POU4F1Q01851 419 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 TUBB3Q13509 450 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 NFE2L1Q14494 772 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 ZNF549Q6P9A3 640 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 NAPRTQ6XQN6 538 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 ZNF547Q8IVP9 402 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 PARP9Q8IXQ6 854 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 CFAP206Q8IYR0 622 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 RIBC1Q8N443 379 aaPredicted RBP13.97□□□□□ -0.17
USP11-207ENST00000478596 ZADH2Q8N4Q0 377 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 C14orf79Q96F83 325 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 ZIM3Q96PE6 472 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 GPR22Q99680 433 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 COG4Q9H9E3 785 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 WASH6PQ9NQA3 447 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 FETUBQ9UGM5 382 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 ZNF180Q9UJW8 692 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 TCFL5Q9UL49 500 aa13.97□□□□□ -0.17
USP11-207ENST00000478596 MTO1Q9Y2Z2 717 aaKnown RBP13.97□□□□□ -0.17
USP11-207ENST00000478596 ZNF469Q96JG9 3925 aaPredicted RBP13.97□□□□□ -0.17
USP11-207ENST00000478596 FAM221AA4D161 298 aa13.96□□□□□ -0.17
USP11-207ENST00000478596 IFRD1O00458 451 aaPredicted RBP13.96□□□□□ -0.17
USP11-207ENST00000478596 LIN7AO14910 233 aaPredicted RBP13.96□□□□□ -0.17
USP11-207ENST00000478596 KIF1CO43896 1103 aaKnown RBP13.96□□□□□ -0.17
USP11-207ENST00000478596 CPNE3O75131 537 aaKnown RBP13.96□□□□□ -0.17
USP11-207ENST00000478596 IPO13O94829 963 aaKnown RBP13.96□□□□□ -0.17
USP11-207ENST00000478596 C1QAP02745 245 aa13.96□□□□□ -0.17
USP11-207ENST00000478596 MYZAPP0CAP1 466 aa13.96□□□□□ -0.17
USP11-207ENST00000478596 TYRP1P17643 537 aa13.96□□□□□ -0.17
USP11-207ENST00000478596 TYK2P29597 1187 aa13.96□□□□□ -0.17
USP11-207ENST00000478596 CDKN2DP55273 166 aa13.96□□□□□ -0.17
USP11-207ENST00000478596 KRT33BQ14525 404 aa13.96□□□□□ -0.17
USP11-207ENST00000478596 ZNF460Q14592 562 aa13.96□□□□□ -0.17
USP11-207ENST00000478596 MYBPC3Q14896 1274 aa13.96□□□□□ -0.17
USP11-207ENST00000478596 CACHD1Q5VU97 1274 aa13.96□□□□□ -0.17
USP11-207ENST00000478596 LRIG3Q6UXM1 1119 aa13.96□□□□□ -0.17
USP11-207ENST00000478596 CMC1Q7Z7K0 106 aa13.96□□□□□ -0.17
USP11-207ENST00000478596 CROCCP2Q86T23 111 aa13.96□□□□□ -0.17
USP11-207ENST00000478596 TBC1D1Q86TI0 1168 aaPredicted RBP13.96□□□□□ -0.17
USP11-207ENST00000478596 TRIM48Q8IWZ4 208 aa13.96□□□□□ -0.17
USP11-207ENST00000478596 CPNE9Q8IYJ1 553 aa13.96□□□□□ -0.17
USP11-207ENST00000478596 CNPY4Q8N129 248 aa13.96□□□□□ -0.17
USP11-207ENST00000478596 MYO1HQ8N1T3 1032 aa13.96□□□□□ -0.17
USP11-207ENST00000478596 ZNF808Q8N4W9 903 aaPredicted RBP13.96□□□□□ -0.17
USP11-207ENST00000478596 OR2L2Q8NH16 312 aa13.96□□□□□ -0.17
USP11-207ENST00000478596 GRHL3Q8TE85 626 aa13.96□□□□□ -0.17
USP11-207ENST00000478596 FAR1Q8WVX9 515 aa13.96□□□□□ -0.17
USP11-207ENST00000478596 ASZ1Q8WWH4 475 aa13.96□□□□□ -0.17
USP11-207ENST00000478596 MR1Q95460 341 aa13.96□□□□□ -0.17
USP11-207ENST00000478596 MTBPQ96DY7 904 aa13.96□□□□□ -0.17
USP11-207ENST00000478596 SLC41A2Q96JW4 573 aa13.96□□□□□ -0.17
USP11-207ENST00000478596 NLNQ9BYT8 704 aa13.96□□□□□ -0.17
USP11-207ENST00000478596 VPS11Q9H270 941 aa13.96□□□□□ -0.17
USP11-207ENST00000478596 GPAMQ9HCL2 828 aa13.96□□□□□ -0.17
USP11-207ENST00000478596 SEMA5BQ9P283 1151 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms