RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 C4orf32Q8N8J7 132 aa2.19□□□□□ -2.06
HPS3-205ENST00000478525 OR7A2PQ8NGA2 310 aa2.19□□□□□ -2.06
HPS3-205ENST00000478525 SPPL2AQ8TCT8 520 aa2.19□□□□□ -2.06
HPS3-205ENST00000478525 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.19□□□□□ -2.06
HPS3-205ENST00000478525 SDHCQ99643 169 aaPredicted RBP2.19□□□□□ -2.06
HPS3-205ENST00000478525 OCR1Q9BZK8 76 aa2.19□□□□□ -2.06
HPS3-205ENST00000478525 MTMR12Q9C0I1 747 aa2.19□□□□□ -2.06
HPS3-205ENST00000478525 TLE6Q9H808 572 aa2.19□□□□□ -2.06
HPS3-205ENST00000478525 CLEC5AQ9NY25 188 aa2.19□□□□□ -2.06
HPS3-205ENST00000478525 ZNF69Q9UC07 566 aa2.19□□□□□ -2.06
HPS3-205ENST00000478525 PLAGL1Q9UM63 463 aa2.19□□□□□ -2.06
HPS3-205ENST00000478525 ZNF148Q9UQR1 794 aa2.19□□□□□ -2.06
HPS3-205ENST00000478525 TRBV4-1A0A0J9YWV2 114 aa2.18□□□□□ -2.06
HPS3-205ENST00000478525 SURF4O15260 269 aa2.18□□□□□ -2.06
HPS3-205ENST00000478525 ATP1B1P05026 303 aa2.18□□□□□ -2.06
HPS3-205ENST00000478525 LAMP2P13473 410 aa2.18□□□□□ -2.06
HPS3-205ENST00000478525 MYOGP15173 224 aa2.18□□□□□ -2.06
HPS3-205ENST00000478525 ARSEP51690 589 aa2.18□□□□□ -2.06
HPS3-205ENST00000478525 PPIAP62937 165 aaKnown RBP2.18□□□□□ -2.06
HPS3-205ENST00000478525 IGLV3-21P80748 117 aaPredicted RBP2.18□□□□□ -2.06
HPS3-205ENST00000478525 TRIM29Q14134 588 aa2.18□□□□□ -2.06
HPS3-205ENST00000478525 CRYMQ14894 314 aa2.18□□□□□ -2.06
HPS3-205ENST00000478525 UTF1Q5T230 341 aa2.18□□□□□ -2.06
HPS3-205ENST00000478525 TEX38Q6PEX7 206 aa2.18□□□□□ -2.06
HPS3-205ENST00000478525 IKBIPQ70UQ0 350 aa2.18□□□□□ -2.06
HPS3-205ENST00000478525 ARHGAP22Q7Z5H3 698 aa2.18□□□□□ -2.06
HPS3-205ENST00000478525 OR4Q3Q8NH05 313 aa2.18□□□□□ -2.06
HPS3-205ENST00000478525 NUS1Q96E22 293 aa2.18□□□□□ -2.06
HPS3-205ENST00000478525 PHYHIPLQ96FC7 376 aa2.18□□□□□ -2.06
HPS3-205ENST00000478525 WBP11Q9Y2W2 641 aaKnown RBP2.18□□□□□ -2.06
HPS3-205ENST00000478525 SELENOKQ9Y6D0 94 aa2.18□□□□□ -2.06
HPS3-205ENST00000478525 E9PAM4 449 aa2.17□□□□□ -2.06
HPS3-205ENST00000478525 TSPAN1O60635 241 aa2.17□□□□□ -2.06
HPS3-205ENST00000478525 ERAL1O75616 437 aaKnown RBP2.17□□□□□ -2.06
HPS3-205ENST00000478525 FAM200BP0CF97 657 aa2.17□□□□□ -2.06
HPS3-205ENST00000478525 LMO2P25791 158 aa2.17□□□□□ -2.06
HPS3-205ENST00000478525 ELAVL4P26378 380 aaKnown RBP2.17□□□□□ -2.06
HPS3-205ENST00000478525 NDST2P52849 883 aa2.17□□□□□ -2.06
HPS3-205ENST00000478525 GPR33Q49SQ1 333 aa2.17□□□□□ -2.06
HPS3-205ENST00000478525 HERC4Q5GLZ8 1057 aaPredicted RBP2.17□□□□□ -2.06
HPS3-205ENST00000478525 LEMD1Q68G75 181 aa2.17□□□□□ -2.06
HPS3-205ENST00000478525 HSCBQ8IWL3 235 aa2.17□□□□□ -2.06
HPS3-205ENST00000478525 TDRD5Q8NAT2 981 aaKnown RBP2.17□□□□□ -2.06
HPS3-205ENST00000478525 OR10Q1Q8NGQ4 319 aa2.17□□□□□ -2.06
HPS3-205ENST00000478525 TDRD7Q8NHU6 1098 aaKnown RBP2.17□□□□□ -2.06
HPS3-205ENST00000478525 ITPAQ9BY32 194 aa2.17□□□□□ -2.06
HPS3-205ENST00000478525 NLGN3Q9NZ94 848 aa2.17□□□□□ -2.06
HPS3-205ENST00000478525 ECE2O60344 883 aa2.16□□□□□ -2.06
HPS3-205ENST00000478525 KLC1Q07866 573 aa2.16□□□□□ -2.06
HPS3-205ENST00000478525 SGCGQ13326 291 aa2.16□□□□□ -2.06
HPS3-205ENST00000478525 KIAA0141Q14154 515 aaPredicted RBP2.16□□□□□ -2.06
HPS3-205ENST00000478525 SIX1Q15475 284 aaPredicted RBP2.16□□□□□ -2.06
HPS3-205ENST00000478525 PHKG1Q16816 387 aa2.16□□□□□ -2.06
HPS3-205ENST00000478525 C9orf66Q5T8R8 295 aa2.16□□□□□ -2.06
HPS3-205ENST00000478525 FCRLAQ7L513 359 aa2.16□□□□□ -2.06
HPS3-205ENST00000478525 VASH2Q86V25 355 aa2.16□□□□□ -2.06
HPS3-205ENST00000478525 SERINC5Q86VE9 423 aa2.16□□□□□ -2.06
HPS3-205ENST00000478525 TMEM173Q86WV6 379 aaPredicted RBP2.16□□□□□ -2.06
HPS3-205ENST00000478525 PRR22Q8IZ63 422 aa2.16□□□□□ -2.06
HPS3-205ENST00000478525 LGI2Q8N0V4 545 aa2.16□□□□□ -2.06
HPS3-205ENST00000478525 FAM89BQ8N5H3 189 aa2.16□□□□□ -2.06
HPS3-205ENST00000478525 THAP8Q8NA92 274 aa2.16□□□□□ -2.06
HPS3-205ENST00000478525 PCYOX1LQ8NBM8 494 aa2.16□□□□□ -2.06
HPS3-205ENST00000478525 EXD1Q8NHP7 514 aa2.16□□□□□ -2.06
HPS3-205ENST00000478525 SCFD2Q8WU76 684 aa2.16□□□□□ -2.06
HPS3-205ENST00000478525 THOC1Q96FV9 657 aaKnown RBP2.16□□□□□ -2.06
HPS3-205ENST00000478525 RADILQ96JH8 1075 aa2.16□□□□□ -2.06
HPS3-205ENST00000478525 C7orf26Q96N11 449 aa2.16□□□□□ -2.06
HPS3-205ENST00000478525 IGHV3-16A0A0C4DH30 117 aa2.15□□□□□ -2.07
HPS3-205ENST00000478525 A0A1B0GVC2 190 aa2.15□□□□□ -2.07
HPS3-205ENST00000478525 ARHGEF33A8MVX0 844 aa2.15□□□□□ -2.07
HPS3-205ENST00000478525 K7ENM7 598 aa2.15□□□□□ -2.07
HPS3-205ENST00000478525 MEIS2O14770 477 aa2.15□□□□□ -2.07
HPS3-205ENST00000478525 PAPSS1O43252 624 aaPredicted RBP2.15□□□□□ -2.07
HPS3-205ENST00000478525 GIG44P09565 113 aaPredicted RBP2.15□□□□□ -2.07
HPS3-205ENST00000478525 GARSP41250 739 aaKnown RBP2.15□□□□□ -2.07
HPS3-205ENST00000478525 GSK3BP49841 420 aa2.15□□□□□ -2.07
HPS3-205ENST00000478525 MFAP4P55083 255 aa2.15□□□□□ -2.07
HPS3-205ENST00000478525 SRSF9Q13242 221 aaKnown RBP eCLIP2.15□□□□□ -2.07
HPS3-205ENST00000478525 RNASEH2BQ5TBB1 312 aaKnown RBP2.15□□□□□ -2.07
HPS3-205ENST00000478525 SNX30Q5VWJ9 437 aa2.15□□□□□ -2.07
HPS3-205ENST00000478525 WSCD1Q658N2 575 aa2.15□□□□□ -2.07
HPS3-205ENST00000478525 DHRS7BQ6IAN0 325 aaPredicted RBP2.15□□□□□ -2.07
HPS3-205ENST00000478525 SYN2Q92777 582 aaPredicted RBP2.15□□□□□ -2.07
HPS3-205ENST00000478525 SEC62Q99442 399 aaKnown RBP2.15□□□□□ -2.07
HPS3-205ENST00000478525 APOL2Q9BQE5 337 aa2.15□□□□□ -2.07
HPS3-205ENST00000478525 PANK2Q9BZ23 570 aa2.15□□□□□ -2.07
HPS3-205ENST00000478525 ASB8Q9H765 288 aa2.15□□□□□ -2.07
HPS3-205ENST00000478525 KRT84Q9NSB2 600 aa2.15□□□□□ -2.07
HPS3-205ENST00000478525 TMEM98Q9Y2Y6 226 aa2.15□□□□□ -2.07
HPS3-205ENST00000478525 POGZQ7Z3K3 1410 aa2.15□□□□□ -2.07
HPS3-205ENST00000478525 PDHXO00330 501 aa2.14□□□□□ -2.07
HPS3-205ENST00000478525 TOMM70O94826 608 aa2.14□□□□□ -2.07
HPS3-205ENST00000478525 IGKV3-11P04433 115 aa2.14□□□□□ -2.07
HPS3-205ENST00000478525 HOXC4P09017 264 aaPredicted RBP2.14□□□□□ -2.07
HPS3-205ENST00000478525 EDNRAP25101 427 aa2.14□□□□□ -2.07
HPS3-205ENST00000478525 TM4SF1P30408 202 aa2.14□□□□□ -2.07
HPS3-205ENST00000478525 ARL3P36405 182 aa2.14□□□□□ -2.07
HPS3-205ENST00000478525 ELK3P41970 407 aa2.14□□□□□ -2.07
HPS3-205ENST00000478525 CCR3P51677 355 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms