RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 SP140Q13342 867 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 SCARB2Q14108 478 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 ANO7Q6IWH7 933 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 NCEH1Q6PIU2 408 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 TAS1R1Q7RTX1 841 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 TSPAN33Q86UF1 283 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 ARHGAP12Q8IWW6 846 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 SLC39A11Q8N1S5 342 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 OR5K1Q8NHB7 308 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 FIBINQ8TAL6 211 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 GPR151Q8TDV0 419 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 ZNF570Q96NI8 536 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 GAL3ST4Q96RP7 486 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 HERC2P3Q9BVR0 1158 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 PLAGL1Q9UM63 463 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 BCAS2O75934 225 aaPredicted RBP13.82□□□□□ -0.2
NPHP4-208ENST00000478423 GSRP00390 522 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 JUNP05412 331 aaKnown RBP13.82□□□□□ -0.2
NPHP4-208ENST00000478423 JAK1P23458 1154 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 ACRV1P26436 265 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 ACADVLP49748 655 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 LBX1P52954 281 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 ABHD18Q0P651 414 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 RGS21Q2M5E4 152 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 ZNF648Q5T619 568 aaPredicted RBP13.82□□□□□ -0.2
NPHP4-208ENST00000478423 ARMC3Q5W041 872 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 ALKAL1Q6UXT8 129 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 TRPV1Q8NER1 839 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 MCFD2Q8NI22 146 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 H6PDO95479 791 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 ALDH4A1P30038 563 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 MEF2AQ02078 507 aaPredicted RBP13.82□□□□□ -0.2
NPHP4-208ENST00000478423 DSC3Q14574 896 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 SYVN1Q86TM6 617 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 ISCA2Q86U28 154 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 GJD3Q8N144 294 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 OR52B6Q8NGF0 335 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 SMARCD2Q92925 531 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 NOL6Q9H6R4 1146 aaKnown RBP13.82□□□□□ -0.2
NPHP4-208ENST00000478423 PTGDR2Q9Y5Y4 395 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 MYO5AQ9Y4I1 1855 aaKnown RBP13.82□□□□□ -0.2
NPHP4-208ENST00000478423 LAMA4Q16363 1823 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 MTTPP55157 894 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 GANABQ14697 944 aaKnown RBP13.82□□□□□ -0.2
NPHP4-208ENST00000478423 EIF4HQ15056 248 aaKnown RBP13.82□□□□□ -0.2
NPHP4-208ENST00000478423 AMZ1Q400G9 498 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 RAB41Q5JT25 222 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 POC5Q8NA72 575 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 METTL21AQ8WXB1 218 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 TOP1MTQ969P6 601 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 LRCH3Q96II8 777 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 MGME1Q9BQP7 344 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 SLC2A11Q9BYW1 496 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 PLGRKTQ9HBL7 147 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 DLGAP4Q9Y2H0 992 aa13.82□□□□□ -0.2
NPHP4-208ENST00000478423 B4DGG1 531 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 ADAM12O43184 909 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 TRMUO75648 421 aaKnown RBP13.81□□□□□ -0.2
NPHP4-208ENST00000478423 KAT7O95251 611 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 TFPIP10646 304 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 BPIP17213 487 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 FDXRP22570 491 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 DUOXA1Q1HG43 343 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 IZUMO1Q8IYV9 350 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 UXS1Q8NBZ7 420 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 UBASH3BQ8TF42 649 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 SCRN2Q96FV2 425 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 ART5Q96L15 291 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 LINC00597Q9H2U6 94 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 A0A1W2PP55 124 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 MCIDASD6RGH6 385 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 PGDP52209 483 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 DSTNP60981 165 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 NEK5Q6P3R8 708 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 PRR23BQ6ZRT6 265 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 PRR11Q96HE9 360 aaPredicted RBP13.81□□□□□ -0.2
NPHP4-208ENST00000478423 CASD1Q96PB1 797 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 DZANK1Q9NVP4 752 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 FAM120CQ9NX05 1096 aaKnown RBP13.81□□□□□ -0.2
NPHP4-208ENST00000478423 LRP5O75197 1615 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 A0A0U1RQS6 177 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 H7BY64 318 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 GMFGO60234 142 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 TIMP1P01033 207 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 MAGEA6P43360 314 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 OXR1Q8N573 874 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 OR4K1Q8NGD4 311 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 TMBIM1Q969X1 311 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 AURKBQ96GD4 344 aaPredicted RBP13.81□□□□□ -0.2
NPHP4-208ENST00000478423 PRAP1Q96NZ9 151 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 CCDC106Q9BWC9 280 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 POLR2J3Q9H1A7 115 aaKnown RBP13.81□□□□□ -0.2
NPHP4-208ENST00000478423 ANKHQ9HCJ1 492 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 SNX7Q9UNH6 387 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 TOGARAM1Q9Y4F4 1720 aa13.81□□□□□ -0.2
NPHP4-208ENST00000478423 DUXAA6NLW8 204 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 PSMA1P25786 263 aaKnown RBP13.8□□□□□ -0.2
NPHP4-208ENST00000478423 KHKP50053 298 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 CDK6Q00534 326 aa13.8□□□□□ -0.2
NPHP4-208ENST00000478423 PCDH1Q08174 1060 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms