RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 HRH2P25021 359 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 RELAQ04206 551 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 KLC1Q07866 573 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 CDC16Q13042 620 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 ZNF169Q14929 603 aaPredicted RBP13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 CCSMST1Q4G0I0 132 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 CRB2Q5IJ48 1285 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 THEMIS2Q5TEJ8 643 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 ICE2Q659A1 982 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 FRMPD2BQ6IN97 320 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 FAM180AQ6UWF9 173 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 IGFL2Q6UWQ7 119 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 CES3Q6UWW8 571 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 SHISA6Q6ZSJ9 500 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 ADCK2Q7Z695 626 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 KBTBD2Q8IY47 623 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 ST6GALNAC3Q8NDV1 305 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 MCUQ8NE86 351 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 FAM136AQ96C01 138 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 PBKQ96KB5 322 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 FAM167BQ9BTA0 163 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 MKKSQ9NPJ1 570 aaPredicted RBP13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 RIC8BQ9NVN3 520 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 TRPC4Q9UBN4 977 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 TAC3Q9UHF0 121 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 NOVA2Q9UNW9 492 aaKnown RBP13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 PIKFYVEQ9Y2I7 2098 aa13.78□□□□□ -0.2
SMARCE1-209ENST00000478349 IGLV3-12A0A075B6K2 115 aa13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 A0A1W2PPV9 198 aa13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 H0YGG7 62 aa13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 ZBTB14O43829 449 aa13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 CBX6O95503 412 aa13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 SYF2O95926 243 aaKnown RBP13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 CYC1P08574 325 aa13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 MPC1LP0DKB6 136 aa13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 CXCR5P32302 372 aa13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 FOXL2P58012 376 aa13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 ARF3P61204 181 aaPredicted RBP13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 PRDX1Q06830 199 aaKnown RBP13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 MFAP5Q13361 173 aa13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 TRIP13Q15645 432 aaPredicted RBP13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 INAQ16352 499 aa13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 LONRF1Q17RB8 773 aa13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 PRTGQ2VWP7 1150 aa13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 ACSBG2Q5FVE4 666 aa13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 UGT3A1Q6NUS8 523 aa13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 MAMDC2Q7Z304 686 aaPredicted RBP13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 CUZD1Q86UP6 607 aa13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 PARP9Q8IXQ6 854 aa13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 PALM2Q8IXS6 379 aa13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 PRELID2Q8N945 189 aa13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 MCOLN3Q8TDD5 553 aa13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 MAGOHBQ96A72 148 aaKnown RBP13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 C19orf60Q96EN9 201 aa13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 LMF1Q96S06 567 aa13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 YIPF2Q9BWQ6 316 aa13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 DRC3Q9H069 523 aa13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 PCBD2Q9H0N5 130 aa13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 JRKLQ9Y4A0 524 aa13.77□□□□□ -0.21
SMARCE1-209ENST00000478349 SPTBN1Q01082 2364 aaKnown RBP13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 COL12A1Q99715 3063 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 LOC105369274A0A096LPK9 316 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 LOC102723532A0A0G2JNH3 316 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 SMAPO00193 183 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 PGRMC1O00264 195 aaKnown RBP13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 SLC16A8O95907 504 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 HEXBP07686 556 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 ICAM2P13598 275 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 AVPR1BP47901 424 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 RGS4P49798 205 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 CLCN7P51798 805 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 TERF1P54274 439 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 EMP2P54851 167 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 ARG2P78540 354 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 PTK6Q13882 451 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 FASTKQ14296 549 aaKnown RBP13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 HIF1AQ16665 826 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 SUSD1Q6UWL2 747 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 RIPOR1Q6ZS17 1223 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 CENPUQ71F23 418 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 NDUFAF7Q7L592 441 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 PAQR7Q86WK9 346 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 LRRC8AQ8IWT6 810 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 REXO1L1PQ8IX06 675 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 PRSS58Q8IYP2 241 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 OR4N4Q8N0Y3 316 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 INPP5DQ92835 1189 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 MMABQ96EY8 250 aaPredicted RBP13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 C10orf90Q96M02 699 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 BARD1Q99728 777 aaKnown RBP13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 FAM129AQ9BZQ8 928 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 ZNF160Q9HCG1 818 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 C20orf96Q9NUD7 363 aaPredicted RBP13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 PCYOX1Q9UHG3 505 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 TEKT2Q9UIF3 430 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 MAD1L1Q9Y6D9 718 aa13.76□□□□□ -0.21
SMARCE1-209ENST00000478349 SEC16AO15027 2179 aa13.75□□□□□ -0.21
SMARCE1-209ENST00000478349 SPTBP11277 2137 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms