RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 SLC44A3Q8N4M1 653 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 VPS37AQ8NEZ2 397 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 BHLHE22Q8NFJ8 381 aaPredicted RBP7.68□□□□□ -1.18
VMA21-203ENST00000477649 OR52E4Q8NGH9 312 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 OR14C36Q8NHC7 312 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 NAT14Q8WUY8 206 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 SLC5A11Q8WWX8 675 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 PYDC1Q8WXC3 89 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 FOXJ1Q92949 421 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 TMEM125Q96AQ2 219 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 PYCR2Q96C36 320 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 LRCH3Q96II8 777 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 CCDC115Q96NT0 180 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 BTBD9Q96Q07 612 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 CGREF1Q99674 301 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 KLHL4Q9C0H6 718 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 MKRN2Q9H000 416 aaKnown RBP7.68□□□□□ -1.18
VMA21-203ENST00000477649 KCNH6Q9H252 994 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 PRO3102Q9H379 93 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 Q9H521 79 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 ALG2Q9H553 416 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 ACTL8Q9H568 366 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 YY1AP1Q9H869 796 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 WASH6PQ9NQA3 447 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 SLC2A4RGQ9NR83 387 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 ARMC1Q9NVT9 282 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 FAM120CQ9NX05 1096 aaKnown RBP7.68□□□□□ -1.18
VMA21-203ENST00000477649 GIMAP2Q9UG22 337 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 MAGEL2Q9UJ55 1249 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 ZFR2Q9UPR6 939 aaKnown RBP7.68□□□□□ -1.18
VMA21-203ENST00000477649 PCDHB3Q9Y5E6 796 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 SNX13Q9Y5W8 968 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 AP1M2Q9Y6Q5 423 aa7.68□□□□□ -1.18
VMA21-203ENST00000477649 DOCK8Q8NF50 2099 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 TBC1D3DA0A087WVF3 549 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 TBC1D3IA0A087WXS9 549 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 TBC1D3EA0A087X179 549 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 TBC1D3KA0A087X1G2 549 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 A0A096LPI6 279 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 PRSS51A0A1B0GVH4 220 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 TBC1D3FA6NER0 549 aaPredicted RBP7.67□□□□□ -1.18
VMA21-203ENST00000477649 TBC1D3LB9A6J9 549 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 E7EQ34 232 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 H3BNX3 289 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 PLK4O00444 970 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 NME4O00746 187 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 FPGTO14772 594 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 HNRNPRO43390 633 aaKnown RBP7.67□□□□□ -1.18
VMA21-203ENST00000477649 ADAM23O75077 832 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 SEMA3DO95025 777 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 CCNDBP1O95273 360 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 APBB3O95704 486 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 PAK4O96013 591 aaPredicted RBP7.67□□□□□ -1.18
VMA21-203ENST00000477649 EGFP01133 1207 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 IGLV3-19P01714 112 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 TBC1D3HP0C7X1 549 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 PPIBP23284 216 aaKnown RBP7.67□□□□□ -1.18
VMA21-203ENST00000477649 PSMA4P25789 261 aaKnown RBP7.67□□□□□ -1.18
VMA21-203ENST00000477649 PTX3P26022 381 aaPredicted RBP7.67□□□□□ -1.18
VMA21-203ENST00000477649 IL12AP29459 219 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 WASP42768 502 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 KIR3DL1P43629 444 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 SOX9P48436 509 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 ARFIP1P53367 373 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 SEC13P55735 322 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 NME5P56597 212 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 SESN3P58005 492 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 ABATP80404 500 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 MS4A2Q01362 244 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 MTAPQ13126 283 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 ADGRE1Q14246 886 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 NFE2L1Q14494 772 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 PON2Q15165 354 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 PRAMEF14Q5SWL7 426 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 LRIF1Q5T3J3 769 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 OGFRL1Q5TC84 451 aaPredicted RBP7.67□□□□□ -1.18
VMA21-203ENST00000477649 ANXA8L1Q5VT79 327 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 PRAMEF13Q5VWM6 474 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 TBC1D3GQ6DHY5 549 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 TBC1D3CQ6IPX1 549 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 NANOGP8Q6NSW7 305 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 NOXRED1Q6NXP6 359 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 LAYNQ6UX15 382 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 DLEU7Q6UYE1 221 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 IKBIPQ70UQ0 350 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 TRIM74Q86UV6 250 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 GPR180Q86V85 440 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 C17orf64Q86WR6 236 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 TBC1D3Q8IZP1 549 aaPredicted RBP7.67□□□□□ -1.18
VMA21-203ENST00000477649 TMEM132CQ8N3T6 1108 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 TBC1D19Q8N5T2 526 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 PLA2G15Q8NCC3 412 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 ABHD11Q8NFV4 315 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 TTLQ8NG68 377 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 OR7G3Q8NG95 312 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 OR8J2Q8NGG1 315 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 EZH1Q92800 747 aaPredicted RBP7.67□□□□□ -1.18
VMA21-203ENST00000477649 MTERF3Q96E29 417 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 SLC45A3Q96JT2 553 aa7.67□□□□□ -1.18
VMA21-203ENST00000477649 TEX37Q96LM6 180 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms