RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 ACTL9Q8TC94 416 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 SLC5A11Q8WWX8 675 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 OR5M11Q96RB7 305 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 SLC30A2Q9BRI3 323 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 B3GNT5Q9BYG0 378 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 ZCCHC4Q9H5U6 513 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 ATP13A1Q9HD20 1204 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 CASS4Q9NQ75 786 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 STAP1Q9ULZ2 295 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 CDYLQ9Y232 598 aa12.33□□□□□ -0.44
RTFDC1-207ENST00000477573 DNAH12Q6ZR08 3092 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 MFSD2BA6NFX1 497 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 SUPT7LO94864 414 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 ENDOD1O94919 500 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 IGHV2-70P01814 119 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 AMHP03971 560 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 LCKP06239 509 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 S100A9P06702 114 aaKnown RBP12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 ACSM4P0C7M7 580 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 PRF1P14222 555 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 CHRM3P20309 590 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 RPS3P23396 243 aaKnown RBP eCLIP12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 POU1F1P28069 291 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 ATP5C1P36542 298 aaKnown RBP12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 PCP4P48539 62 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 ARSFP54793 590 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 C21orf58P58505 322 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 SCN1BQ07699 218 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 IL18R1Q13478 541 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 DAG1Q14118 895 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 UPP1Q16831 310 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 TRNP1Q6NT89 227 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 PKN3Q6P5Z2 889 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 SLC44A2Q8IWA5 706 aaPredicted RBP12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 ZNF555Q8NEP9 628 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 UBASH3BQ8TF42 649 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 ASZ1Q8WWH4 475 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 KCTD13Q8WZ19 329 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 KHSRPQ92945 711 aaKnown RBP eCLIP12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 ISL2Q96A47 359 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 SORCS2Q96PQ0 1159 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 PEBP4Q96S96 227 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 CCDC90BQ9GZT6 254 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 HMX1Q9NP08 348 aaPredicted RBP12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 MIOSQ9NXC5 875 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 MLXQ9UH92 298 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 CDH9Q9ULB4 789 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 LRFN2Q9ULH4 789 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 RAP2CQ9Y3L5 183 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 HMX2A2RU54 273 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 B4DXG7 233 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 HSD17B1P14061 328 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 KCNJ5P48544 419 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 CAPZA1P52907 286 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 PRMT2P55345 433 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 SIM2Q14190 667 aaPredicted RBP12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 TOMM20Q15388 145 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 C21orf62-AS1Q17RA5 79 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 AP5B1Q2VPB7 878 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 SH3PXD2AQ5TCZ1 1133 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 ROPN1LQ96C74 230 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 WBP1Q96G27 269 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 PPP3R2Q96LZ3 170 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 TRNT1Q96Q11 434 aaKnown RBP12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 GSX2Q9BZM3 304 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 CLEC4MQ9H2X3 399 aaPredicted RBP12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 ASAH2Q9NR71 780 aa12.32□□□□□ -0.44
RTFDC1-207ENST00000477573 SLC22A23A1A5C7 686 aa12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 CASTOR2A6NHX0 329 aa12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 CXorf49A8MYA2 514 aaPredicted RBP12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 PMPCBO75439 489 aa12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 RPS2P15880 293 aaKnown RBP12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 HOXB8P17481 243 aaPredicted RBP12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 EIF2S3P41091 472 aaKnown RBP12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 PIK3CBP42338 1070 aa12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 SPCS3P61009 180 aa12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 RAB4BP61018 213 aa12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 FGL1Q08830 312 aa12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 TUSC3Q13454 348 aa12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 DPYSL3Q14195 570 aa12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 GRB7Q14451 532 aa12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 QPRTQ15274 297 aa12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 EIF2S3LQ2VIR3 472 aaKnown RBP12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 REP15Q6BDI9 236 aa12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 GPR155Q7Z3F1 870 aa12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 STX19Q8N4C7 294 aa12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 CAMKK1Q8N5S9 505 aa12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 DNAAF3Q8N9W5 541 aa12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 OR1M1Q8NGA1 313 aa12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 NANPQ8TBE9 248 aa12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 ASB15Q8WXK1 588 aa12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 CENPIQ92674 756 aaPredicted RBP12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 TRIM43Q96BQ3 446 aaPredicted RBP12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 ELP4Q96EB1 424 aa12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 RNF157Q96PX1 679 aa12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 ZNF670Q9BS34 389 aa12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 KCNH6Q9H252 994 aa12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 SMOC2Q9H3U7 446 aa12.31□□□□□ -0.44
RTFDC1-207ENST00000477573 WDR55Q9H6Y2 383 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms