RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 OR2W6PQ8NHA6 318 aa16.93■□□□□ 0.3
PTPN7-209ENST00000477554 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.93■□□□□ 0.3
PTPN7-209ENST00000477554 SLC22A11Q9NSA0 550 aa16.93■□□□□ 0.3
PTPN7-209ENST00000477554 SPATA7Q9P0W8 599 aa16.93■□□□□ 0.3
PTPN7-209ENST00000477554 TRMT6Q9UJA5 497 aaKnown RBP16.93■□□□□ 0.3
PTPN7-209ENST00000477554 ZNF180Q9UJW8 692 aa16.93■□□□□ 0.3
PTPN7-209ENST00000477554 SERTAD3Q9UJW9 196 aa16.93■□□□□ 0.3
PTPN7-209ENST00000477554 PDE10AQ9Y233 779 aa16.93■□□□□ 0.3
PTPN7-209ENST00000477554 PCDHGA6Q9Y5G7 932 aa16.93■□□□□ 0.3
PTPN7-209ENST00000477554 E7ENX8 843 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 PYCARD-AS1I3L0S3 204 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 MASP2O00187 686 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 ZSCAN9O15535 394 aaPredicted RBP16.92■□□□□ 0.3
PTPN7-209ENST00000477554 CDH16O75309 829 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 CREG1O75629 220 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 DNAJB5O75953 348 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 STATHP02808 62 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 PTPN4P29074 926 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 SERPINB9P50453 376 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 PNLIPRP1P54315 467 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 TAP2Q03519 686 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 CHAF1BQ13112 559 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 RASA2Q15283 850 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 TTLL9Q3SXZ7 439 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 LGSNQ5TDP6 509 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 CPZQ66K79 652 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 ADGRD1Q6QNK2 874 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 TAOK1Q7L7X3 1001 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 STRA8Q7Z7C7 330 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 RIBC1Q8N443 379 aaPredicted RBP16.92■□□□□ 0.3
PTPN7-209ENST00000477554 METTL27Q8N6F8 245 aaPredicted RBP16.92■□□□□ 0.3
PTPN7-209ENST00000477554 LINGO1Q96FE5 620 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 LRFN5Q96NI6 719 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 GBP5Q96PP8 586 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 MCMBPQ9BTE3 642 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 DHRS4Q9BTZ2 278 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 CHRNA10Q9GZZ6 450 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 CUEDC1Q9NWM3 386 aaPredicted RBP16.92■□□□□ 0.3
PTPN7-209ENST00000477554 ZNF446Q9NWS9 450 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 KLHL42Q9P2K6 505 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 PSMC3IPQ9P2W1 217 aaPredicted RBP16.92■□□□□ 0.3
PTPN7-209ENST00000477554 TAC3Q9UHF0 121 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 PLCL2Q9UPR0 1127 aa16.92■□□□□ 0.3
PTPN7-209ENST00000477554 MDC1Q14676 2089 aaKnown RBP16.91■□□□□ 0.3
PTPN7-209ENST00000477554 A0A0J9YVX5 310 aa16.91■□□□□ 0.3
PTPN7-209ENST00000477554 MT-ND3P03897 115 aa16.91■□□□□ 0.3
PTPN7-209ENST00000477554 CATP04040 527 aaKnown RBP16.91■□□□□ 0.3
PTPN7-209ENST00000477554 NR1D1P20393 614 aa16.91■□□□□ 0.3
PTPN7-209ENST00000477554 SAT1P21673 171 aa16.91■□□□□ 0.3
PTPN7-209ENST00000477554 CNTFP26441 200 aa16.91■□□□□ 0.3
PTPN7-209ENST00000477554 SPRP35270 261 aaPredicted RBP16.91■□□□□ 0.3
PTPN7-209ENST00000477554 POLE2P56282 527 aa16.91■□□□□ 0.3
PTPN7-209ENST00000477554 CEP85LQ5SZL2 805 aa16.91■□□□□ 0.3
PTPN7-209ENST00000477554 FBXO42Q6P3S6 717 aa16.91■□□□□ 0.3
PTPN7-209ENST00000477554 CYB5D1Q6P9G0 228 aa16.91■□□□□ 0.3
PTPN7-209ENST00000477554 BORAQ6PGQ7 559 aa16.91■□□□□ 0.3
PTPN7-209ENST00000477554 ZC3HC1Q86WB0 502 aaKnown RBP16.91■□□□□ 0.3
PTPN7-209ENST00000477554 PLD3Q8IV08 490 aa16.91■□□□□ 0.3
PTPN7-209ENST00000477554 CEP97Q8IW35 865 aa16.91■□□□□ 0.3
PTPN7-209ENST00000477554 N4BP2L2Q92802 583 aaPredicted RBP16.91■□□□□ 0.3
PTPN7-209ENST00000477554 MRRFQ96E11 262 aaKnown RBP16.91■□□□□ 0.3
PTPN7-209ENST00000477554 WBP1Q96G27 269 aa16.91■□□□□ 0.3
PTPN7-209ENST00000477554 DPH7Q9BTV6 452 aa16.91■□□□□ 0.3
PTPN7-209ENST00000477554 RAB11FIP5Q9BXF6 653 aa16.91■□□□□ 0.3
PTPN7-209ENST00000477554 TRIM55Q9BYV6 548 aa16.91■□□□□ 0.3
PTPN7-209ENST00000477554 UNKQ9C0B0 810 aaKnown RBP16.91■□□□□ 0.3
PTPN7-209ENST00000477554 TAS2R13Q9NYV9 303 aa16.91■□□□□ 0.3
PTPN7-209ENST00000477554 FARSAQ9Y285 508 aaKnown RBP16.91■□□□□ 0.3
PTPN7-209ENST00000477554 COMMD10Q9Y6G5 202 aa16.91■□□□□ 0.3
PTPN7-209ENST00000477554 MED13Q9UHV7 2174 aa16.91■□□□□ 0.3
PTPN7-209ENST00000477554 TLDC2A0PJX2 215 aa16.9■□□□□ 0.3
PTPN7-209ENST00000477554 GOLGA6L10A6NI86 522 aa16.9■□□□□ 0.3
PTPN7-209ENST00000477554 EIF4E1BA6NMX2 242 aaKnown RBP16.9■□□□□ 0.3
PTPN7-209ENST00000477554 KDM1AO60341 852 aa16.9■□□□□ 0.3
PTPN7-209ENST00000477554 FAM155BO75949 473 aa16.9■□□□□ 0.3
PTPN7-209ENST00000477554 KRT38O76015 456 aa16.9■□□□□ 0.3
PTPN7-209ENST00000477554 GCAP28676 217 aa16.9■□□□□ 0.3
PTPN7-209ENST00000477554 SKIV2L2P42285 1042 aaKnown RBP16.9■□□□□ 0.3
PTPN7-209ENST00000477554 VSX2P58304 361 aaPredicted RBP16.9■□□□□ 0.3
PTPN7-209ENST00000477554 ZNF844Q08AG5 666 aa16.9■□□□□ 0.3
PTPN7-209ENST00000477554 KRT71Q3SY84 523 aa16.9■□□□□ 0.3
PTPN7-209ENST00000477554 EPS8L3Q8TE67 593 aaKnown RBP16.9■□□□□ 0.3
PTPN7-209ENST00000477554 DCAKDQ8WVC6 231 aa16.9■□□□□ 0.3
PTPN7-209ENST00000477554 MED8Q96G25 268 aa16.9■□□□□ 0.3
PTPN7-209ENST00000477554 RBBP8Q99708 897 aa16.9■□□□□ 0.3
PTPN7-209ENST00000477554 MESP1Q9BRJ9 268 aa16.9■□□□□ 0.3
PTPN7-209ENST00000477554 ARHGAP9Q9BRR9 750 aa16.9■□□□□ 0.3
PTPN7-209ENST00000477554 ATG10Q9H0Y0 220 aa16.9■□□□□ 0.3
PTPN7-209ENST00000477554 CAB39LQ9H9S4 337 aa16.9■□□□□ 0.3
PTPN7-209ENST00000477554 SYTL2Q9HCH5 934 aa16.9■□□□□ 0.3
PTPN7-209ENST00000477554 IRAK4Q9NWZ3 460 aa16.9■□□□□ 0.3
PTPN7-209ENST00000477554 CORO1CQ9ULV4 474 aaPredicted RBP16.9■□□□□ 0.3
PTPN7-209ENST00000477554 VWA7Q9Y334 891 aa16.9■□□□□ 0.3
PTPN7-209ENST00000477554 KCNMB2Q9Y691 235 aa16.9■□□□□ 0.3
PTPN7-209ENST00000477554 TNRC6AQ8NDV7 1962 aaKnown RBP16.9■□□□□ 0.3
PTPN7-209ENST00000477554 ZNF462Q96JM2 2506 aa16.9■□□□□ 0.3
PTPN7-209ENST00000477554 TLN1Q9Y490 2541 aaKnown RBP16.89■□□□□ 0.29
PTPN7-209ENST00000477554 IQANK1A0A1B0GTG1 560 aa16.89■□□□□ 0.29
PTPN7-209ENST00000477554 OR2A25A4D2G3 310 aa16.89■□□□□ 0.29
PTPN7-209ENST00000477554 C21orf140B9A014 251 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms