RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 KRTAP10-9P60411 292 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 COPS2P61201 443 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 AP2B1P63010 937 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 ALDH6A1Q02252 535 aaKnown RBP6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 OC90Q02509 493 aaPredicted RBP6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 MSLNQ13421 630 aaPredicted RBP6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 SYT16Q17RD7 645 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 PARP6Q2NL67 630 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 HKDC1Q2TB90 917 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 BTBD16Q32M84 506 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 P3H1Q32P28 736 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 MINDY4Q4G0A6 757 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 CCSMST1Q4G0I0 132 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 ATG9BQ674R7 924 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 C11orf63Q6NUN7 778 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 AADACL2Q6P093 401 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 UNC5DQ6UXZ4 953 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 C3P1Q6ZMU1 363 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 MEX3BQ6ZN04 569 aaKnown RBP6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 LINC00523Q86TU6 105 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 LDB1Q86U70 411 aaPredicted RBP6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 CSNK1A1LQ8N752 337 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 AMER2Q8N7J2 671 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 FAM71DQ8N9W8 422 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 OR2L3Q8NG85 312 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 OR52K1Q8NGK4 314 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 PSMF1Q92530 271 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 RERGQ96A58 199 aaPredicted RBP6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 ZUFSPQ96AP4 578 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 RAD51AP1Q96B01 352 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 FOPNLQ96NB1 174 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 ZFYVE21Q9BQ24 234 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 C19orf43Q9BQ61 176 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 DPH7Q9BTV6 452 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 KCNK13Q9HB14 408 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 ARNT2Q9HBZ2 717 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 C14orf105Q9NVL8 296 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 STMN3Q9NZ72 180 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 SLC2A6Q9UGQ3 507 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 INTUQ9ULD6 942 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 NPIPA1Q9UND3 350 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 RUVBL1Q9Y265 456 aaKnown RBP6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 NEU2Q9Y3R4 380 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 NFS1Q9Y697 457 aa6.35□□□□□ -1.39
RTFDC1-206ENST00000477485 A0A0A6YYC8 382 aaPredicted RBP6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 IGHV3-20A0A0C4DH32 117 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 FITM1A5D6W6 292 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 TARM1B6A8C7 271 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 AKR1B15C9JRZ8 316 aaPredicted RBP6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 H0YGG7 62 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 I3L1I5 382 aaPredicted RBP6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 PSMD3O43242 534 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 FKBP9O95302 570 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 ONECUT2O95948 504 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 C8orf89P0DMQ9 161 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 ICAM2P13598 275 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 EEF1DP29692 281 aaKnown RBP6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 CTNNA1P35221 906 aaKnown RBP6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 RPA3P35244 121 aaPredicted RBP6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 KIR3DL1P43629 444 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 EIF3BP55884 814 aaKnown RBP6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 ARF3P61204 181 aaPredicted RBP6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 YBX1P67809 324 aaKnown RBP6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 MAT1AQ00266 395 aaKnown RBP6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 HSF1Q00613 529 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 CDH17Q12864 832 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 GRB7Q14451 532 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 SEMA3AQ14563 771 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 NAA25Q14CX7 972 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 PCOLCEQ15113 449 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 SPA17Q15506 151 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 CDSNQ15517 529 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 SUSD1Q6UWL2 747 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 RIPOR1Q6ZS17 1223 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 LANCL3Q6ZV70 420 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 RNF44Q7L0R7 432 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 OTOAQ7RTW8 1153 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 TMEM200AQ86VY9 491 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 CNGA4Q8IV77 575 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 ZNF295-AS1Q8N0V1 137 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 BEST3Q8N1M1 668 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 FAM98AQ8NCA5 519 aaKnown RBP6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 PPHLN1Q8NEY8 458 aaKnown RBP6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 OR4L1Q8NH43 312 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 CA5BP1Q8WTZ4 195 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 FAM136AQ96C01 138 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 SDCCAG3Q96C92 435 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 C10orf90Q96M02 699 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 PANX3Q96QZ0 392 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 UTP23Q9BRU9 249 aaKnown RBP6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 TMEM121Q9BTD3 319 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 TUBB6Q9BUF5 446 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 MENTQ9BUN1 341 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 HES7Q9BYE0 225 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 DRC3Q9H069 523 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 MRPS30Q9NP92 439 aaKnown RBP6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 MKKSQ9NPJ1 570 aaPredicted RBP6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 CATSPERZQ9NTU4 200 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 COQ3Q9NZJ6 369 aa6.34□□□□□ -1.39
RTFDC1-206ENST00000477485 C19orf25Q9UFG5 118 aaPredicted RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms