RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-212	ENST00000477182	ALKBH8	Q96BT7	664 aa	Known RBP	11.17	□□□□□ -0.62
LSM2-212	ENST00000477182	PTER	Q96BW5	349 aa		11.17	□□□□□ -0.62
LSM2-212	ENST00000477182	TCTN2	Q96GX1	697 aa		11.17	□□□□□ -0.62
LSM2-212	ENST00000477182	SCYL1	Q96KG9	808 aa		11.17	□□□□□ -0.62
LSM2-212	ENST00000477182	GPR78	Q96P69	363 aa		11.17	□□□□□ -0.62
LSM2-212	ENST00000477182	INSM2	Q96T92	566 aa	Predicted RBP	11.17	□□□□□ -0.62
LSM2-212	ENST00000477182	C12orf65	Q9H3J6	166 aa	Known RBP	11.17	□□□□□ -0.62
LSM2-212	ENST00000477182	ALG9	Q9H6U8	611 aa		11.17	□□□□□ -0.62
LSM2-212	ENST00000477182	WASH6P	Q9NQA3	447 aa		11.17	□□□□□ -0.62
LSM2-212	ENST00000477182	OCIAD1	Q9NX40	245 aa		11.17	□□□□□ -0.62
LSM2-212	ENST00000477182	MKS1	Q9NXB0	559 aa		11.17	□□□□□ -0.62
LSM2-212	ENST00000477182	SCHIP1	Q9P0W5	487 aa	Predicted RBP	11.17	□□□□□ -0.62
LSM2-212	ENST00000477182	DCDC2	Q9UHG0	476 aa		11.17	□□□□□ -0.62
LSM2-212	ENST00000477182	ADAMTS6	Q9UKP5	1117 aa		11.17	□□□□□ -0.62
LSM2-212	ENST00000477182	ACTL7B	Q9Y614	415 aa		11.17	□□□□□ -0.62
LSM2-212	ENST00000477182	OR52A4P	A6NMU1	304 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182		H3BQF6	201 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	STK17B	O94768	372 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	SORBS2	O94875	1100 aa	Known RBP	11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	MATN4	O95460	622 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	CRHR1	P34998	444 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	BDKRB1	P46663	353 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	CCT5	P48643	541 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	MC2R	Q01718	297 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	GPS2	Q13227	327 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	RPE65	Q16518	533 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	KLC3	Q6P597	504 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	TMEM71	Q6P5X7	295 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	SBSN	Q6UWP8	590 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	UBE2R2	Q712K3	238 aa	Predicted RBP	11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	ISCA2	Q86U28	154 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	C17orf82	Q86X59	251 aa	Predicted RBP	11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	BMPER	Q8N8U9	685 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	PHC3	Q8NDX5	983 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	ZDHHC1	Q8WTX9	485 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	PATE1	Q8WXA2	126 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	ASB11	Q8WXH4	323 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	TFG	Q92734	400 aa	Predicted RBP	11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	EXT2	Q93063	718 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	KIAA1191	Q96A73	305 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	PKNOX2	Q96KN3	472 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	FOPNL	Q96NB1	174 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	KCNK9	Q9NPC2	374 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	FBXO8	Q9NRD0	319 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	IMP3	Q9NV31	184 aa	Known RBP	11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	TMEM216	Q9P0N5	145 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	SLC17A7	Q9P2U7	560 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	EMCN	Q9ULC0	261 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	ENTPD4	Q9Y227	616 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	ASF1A	Q9Y294	204 aa		11.16	□□□□□ -0.62
LSM2-212	ENST00000477182	MED13L	Q71F56	2210 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	ARHGEF33	A8MVX0	844 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	GFY	I3L273	518 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	TYROBP	O43914	113 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	PSIP1	O75475	530 aa	Known RBP	11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	RECK	O95980	971 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	CAT	P04040	527 aa	Known RBP	11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	PDGFA	P04085	211 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	C8G	P07360	202 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	MTHFD1	P11586	935 aa	Known RBP	11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	HPD	P32754	393 aa	Predicted RBP	11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	RPA3	P35244	121 aa	Predicted RBP	11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	PGD	P52209	483 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	KPNA2	P52292	529 aa	Known RBP	11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	MAZ	P56270	477 aa	Known RBP	11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	ERV3-1	Q14264	604 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	ACAP2	Q15057	778 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	PHKG1	Q16816	387 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	TECRL	Q5HYJ1	363 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	IYD	Q6PHW0	289 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	UNC5D	Q6UXZ4	953 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	ADAMTSL2	Q86TH1	951 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	LCA5	Q86VQ0	697 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	RASGRP3	Q8IV61	690 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	NAGS	Q8N159	534 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	OR5AR1	Q8NGP9	310 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	TCP10L	Q8TDR4	215 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	DLG3	Q92796	817 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	CXorf40B	Q96DE9	158 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	FERD3L	Q96RJ6	166 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	SELENOS	Q9BQE4	189 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	HGH1	Q9BTY7	390 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	ZMYND15	Q9H091	742 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	IQCG	Q9H095	443 aa	Known RBP	11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	TFB2M	Q9H5Q4	396 aa	Known RBP	11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	SSU72	Q9NP77	194 aa	Known RBP	11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	MED4	Q9NPJ6	270 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	UTP6	Q9NYH9	597 aa	Known RBP	11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	ZNF624	Q9P2J8	865 aa	Predicted RBP	11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	XPR1	Q9UBH6	696 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	CIDEB	Q9UHD4	219 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	GRID1	Q9ULK0	1009 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	RNF112	Q9ULX5	631 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	PLLP	Q9Y342	182 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	MRPS18B	Q9Y676	258 aa	Known RBP	11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	HIVEP1	P15822	2718 aa		11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	TNRC6A	Q8NDV7	1962 aa	Known RBP	11.15	□□□□□ -0.62
LSM2-212	ENST00000477182	TMEM120B	A0PK00	339 aa		11.14	□□□□□ -0.63
LSM2-212	ENST00000477182	KRT87P	A6NCN2	255 aa		11.14	□□□□□ -0.63
LSM2-212	ENST00000477182	OR5K4	A6NMS3	321 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms