RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 CHERPQ8IWX8 916 aaKnown RBP10.78□□□□□ -0.68
BRCA1-213ENST00000476777 KATNAL2Q8IYT4 538 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 RCOR2Q8IZ40 523 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 AMER3Q8N944 861 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 MDS2Q8NDY4 140 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 OR2L3Q8NG85 312 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 CA5BP1Q8WTZ4 195 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 CABS1Q96KC9 395 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 SPATA13Q96N96 652 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 MIPEPQ99797 713 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 TRIM51Q9BSJ1 452 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 TUBB6Q9BUF5 446 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 YIPF2Q9BWQ6 316 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 HES7Q9BYE0 225 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 TGIF2Q9GZN2 237 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 SLC39A10Q9ULF5 831 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 NPIPA1Q9UND3 350 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 CDC14AQ9UNH5 594 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 HCFC1P51610 2035 aa10.78□□□□□ -0.68
BRCA1-213ENST00000476777 ATRQ13535 2644 aa10.77□□□□□ -0.68
BRCA1-213ENST00000476777 A0A1B0GTL3 188 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 FAM221AA4D161 298 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 RCCD1A6NED2 376 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 MROH6A6NGR9 719 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 A8MUI8 341 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 E9PLN8 166 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 H0YGG7 62 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 ERVK-10P10266 1014 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 HOXB1P14653 301 aaPredicted RBP10.77□□□□□ -0.69
BRCA1-213ENST00000476777 ARF3P61204 181 aaPredicted RBP10.77□□□□□ -0.69
BRCA1-213ENST00000476777 TUBA3CQ13748 450 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 POU6F1Q14863 301 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 ACER2Q5QJU3 275 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 FCRLBQ6BAA4 426 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 TUBA3EQ6PEY2 450 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 C3P1Q6ZMU1 363 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 ZC3H7AQ8IWR0 971 aaKnown RBP10.77□□□□□ -0.69
BRCA1-213ENST00000476777 BEST3Q8N1M1 668 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 HMGCLL1Q8TB92 370 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 ACTL9Q8TC94 416 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 LKAAEAR1Q8TD35 194 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 ASZ1Q8WWH4 475 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 SDCCAG3Q96C92 435 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 MVB12AQ96EY5 273 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 SCMH1Q96GD3 660 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 FRMD6Q96NE9 622 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 SIGLEC12Q96PQ1 595 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 PPP1R2P1Q96PQ5 205 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 DNAJC7Q99615 494 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 VKORC1Q9BQB6 163 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 FERMT1Q9BQL6 677 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 RAB11FIP5Q9BXF6 653 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 GOLPH3Q9H4A6 298 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 SYNPO2LQ9H987 977 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 MKKSQ9NPJ1 570 aaPredicted RBP10.77□□□□□ -0.69
BRCA1-213ENST00000476777 KLHL1Q9NR64 748 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 SPTLC3Q9NUV7 552 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 PIH1D1Q9NWS0 290 aaKnown RBP10.77□□□□□ -0.69
BRCA1-213ENST00000476777 MKL2Q9ULH7 1088 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 ALG6Q9Y672 507 aa10.77□□□□□ -0.69
BRCA1-213ENST00000476777 A0A1W2PPV9 198 aa10.76□□□□□ -0.69
BRCA1-213ENST00000476777 CCDC162PA2VCL2 907 aa10.76□□□□□ -0.69
BRCA1-213ENST00000476777 OR2A25A4D2G3 310 aa10.76□□□□□ -0.69
BRCA1-213ENST00000476777 KRT87PA6NCN2 255 aa10.76□□□□□ -0.69
BRCA1-213ENST00000476777 PRPF4O43172 522 aaKnown RBP eCLIP10.76□□□□□ -0.695e-17■■■■■ 29.7
BRCA1-213ENST00000476777 ASNA1O43681 348 aa10.76□□□□□ -0.69
BRCA1-213ENST00000476777 STK10O94804 968 aaKnown RBP10.76□□□□□ -0.69
BRCA1-213ENST00000476777 SLCO2B1O94956 709 aa10.76□□□□□ -0.69
BRCA1-213ENST00000476777 C8orf89P0DMQ9 161 aa10.76□□□□□ -0.69
BRCA1-213ENST00000476777 ABOP16442 354 aa10.76□□□□□ -0.69
BRCA1-213ENST00000476777 CD96P40200 585 aa10.76□□□□□ -0.69
BRCA1-213ENST00000476777 YBX1P67809 324 aaKnown RBP10.76□□□□□ -0.69
BRCA1-213ENST00000476777 HSF1Q00613 529 aa10.76□□□□□ -0.69
BRCA1-213ENST00000476777 OR1C1Q15619 314 aa10.76□□□□□ -0.69
BRCA1-213ENST00000476777 SYT16Q17RD7 645 aa10.76□□□□□ -0.69
BRCA1-213ENST00000476777 CCSMST1Q4G0I0 132 aa10.76□□□□□ -0.69
BRCA1-213ENST00000476777 PLAG1Q6DJT9 500 aa10.76□□□□□ -0.69
BRCA1-213ENST00000476777 SPINK14Q6IE38 97 aa10.76□□□□□ -0.69
BRCA1-213ENST00000476777 H3F3CQ6NXT2 135 aa10.76□□□□□ -0.69
BRCA1-213ENST00000476777 CDKL3Q8IVW4 592 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-213ENST00000476777 GHDCQ8N2G8 530 aa10.76□□□□□ -0.69
BRCA1-213ENST00000476777 ARHGEF39Q8N4T4 335 aa10.76□□□□□ -0.69
BRCA1-213ENST00000476777 OR2A1Q8NGT9 310 aa10.76□□□□□ -0.69
BRCA1-213ENST00000476777 ZFYVE21Q9BQ24 234 aa10.76□□□□□ -0.69
BRCA1-213ENST00000476777 ANP32EQ9BTT0 268 aa10.76□□□□□ -0.69
BRCA1-213ENST00000476777 NPDC1Q9NQX5 325 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-213ENST00000476777 ANKRD10Q9NXR5 420 aa10.76□□□□□ -0.69
BRCA1-213ENST00000476777 PPT2Q9UMR5 302 aa10.76□□□□□ -0.69
BRCA1-213ENST00000476777 RUVBL1Q9Y265 456 aaKnown RBP10.76□□□□□ -0.69
BRCA1-213ENST00000476777 ASB1Q9Y576 335 aa10.76□□□□□ -0.69
BRCA1-213ENST00000476777 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.76□□□□□ -0.697e-6■■□□□ 12.1
BRCA1-213ENST00000476777 FN1P02751 2386 aaKnown RBP10.76□□□□□ -0.69
BRCA1-213ENST00000476777 IGHV3-20A0A0C4DH32 117 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 IQCF5A8MTL0 148 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 F8W8V4 182 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 FOXS1O43638 330 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 FAM155BO75949 473 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 SEC24DO94855 1032 aaPredicted RBP10.75□□□□□ -0.69
BRCA1-213ENST00000476777 TSPAN12O95859 305 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 APOA4P06727 396 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms