RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 PAGE2BQ5JRK9 111 aa27.8■■■□□ 2.04
VEGFA-211ENST00000476772 ICE2Q659A1 982 aa27.8■■■□□ 2.04
VEGFA-211ENST00000476772 ADNP2Q6IQ32 1131 aa27.8■■■□□ 2.04
VEGFA-211ENST00000476772 MED27Q6P2C8 311 aa27.8■■■□□ 2.04
VEGFA-211ENST00000476772 POU5F2Q8N7G0 328 aa27.8■■■□□ 2.04
VEGFA-211ENST00000476772 OR7G3Q8NG95 312 aa27.8■■■□□ 2.04
VEGFA-211ENST00000476772 OR2A1Q8NGT9 310 aa27.8■■■□□ 2.04
VEGFA-211ENST00000476772 PPP3R2Q96LZ3 170 aa27.8■■■□□ 2.04
VEGFA-211ENST00000476772 C1orf50Q9BV19 199 aa27.8■■■□□ 2.04
VEGFA-211ENST00000476772 ACTR5Q9H9F9 607 aaPredicted RBP27.8■■■□□ 2.04
VEGFA-211ENST00000476772 PCDHB11Q9Y5F2 797 aa27.8■■■□□ 2.04
VEGFA-211ENST00000476772 DNAH14Q0VDD8 3507 aa27.79■■■□□ 2.04
VEGFA-211ENST00000476772 PIPSLA2A3N6 862 aa27.79■■■□□ 2.04
VEGFA-211ENST00000476772 PRICKLE3O43900 615 aaPredicted RBP27.79■■■□□ 2.04
VEGFA-211ENST00000476772 CPA2P48052 419 aa27.79■■■□□ 2.04
VEGFA-211ENST00000476772 DIO3P55073 304 aa27.79■■■□□ 2.04
VEGFA-211ENST00000476772 DDX39BQ13838 428 aaKnown RBP27.79■■■□□ 2.04
VEGFA-211ENST00000476772 PLCL1Q15111 1095 aa27.79■■■□□ 2.04
VEGFA-211ENST00000476772 TEAD4Q15561 434 aa27.79■■■□□ 2.04
VEGFA-211ENST00000476772 GKN2Q86XP6 184 aa27.79■■■□□ 2.04
VEGFA-211ENST00000476772 ZNF548Q8NEK5 533 aaPredicted RBP27.79■■■□□ 2.04
VEGFA-211ENST00000476772 PELI2Q9HAT8 420 aa27.79■■■□□ 2.04
VEGFA-211ENST00000476772 TMEM74BQ9NUR3 256 aa27.79■■■□□ 2.04
VEGFA-211ENST00000476772 SPHK1Q9NYA1 384 aa27.79■■■□□ 2.04
VEGFA-211ENST00000476772 OR6C2Q9NZP2 312 aa27.79■■■□□ 2.04
VEGFA-211ENST00000476772 A0A1B0GTW7 788 aa27.78■■■□□ 2.04
VEGFA-211ENST00000476772 SERTM1A2A2V5 107 aa27.78■■■□□ 2.04
VEGFA-211ENST00000476772 PCNAP12004 261 aa27.78■■■□□ 2.04
VEGFA-211ENST00000476772 STX1BP61266 288 aa27.78■■■□□ 2.04
VEGFA-211ENST00000476772 LAPTM5Q13571 262 aa27.78■■■□□ 2.04
VEGFA-211ENST00000476772 KIF19Q2TAC6 998 aa27.78■■■□□ 2.04
VEGFA-211ENST00000476772 FAM129CQ86XR2 697 aa27.78■■■□□ 2.04
VEGFA-211ENST00000476772 MTERF1Q99551 399 aaKnown RBP27.78■■■□□ 2.04
VEGFA-211ENST00000476772 SRMSQ9H3Y6 488 aa27.78■■■□□ 2.04
VEGFA-211ENST00000476772 MRGBPQ9NV56 204 aa27.78■■■□□ 2.04
VEGFA-211ENST00000476772 BDP1A6H8Y1 2624 aa27.78■■■□□ 2.04
VEGFA-211ENST00000476772 CHRM5P08912 532 aaPredicted RBP27.78■■■□□ 2.04
VEGFA-211ENST00000476772 ZNF33BQ06732 778 aa27.78■■■□□ 2.04
VEGFA-211ENST00000476772 RFTN2Q52LD8 501 aaPredicted RBP27.78■■■□□ 2.04
VEGFA-211ENST00000476772 ZNF740Q8NDX6 193 aa27.78■■■□□ 2.04
VEGFA-211ENST00000476772 ZFPM2Q8WW38 1151 aa27.78■■■□□ 2.04
VEGFA-211ENST00000476772 SLC7A6OSQ96CW6 309 aaPredicted RBP27.78■■■□□ 2.04
VEGFA-211ENST00000476772 LRTM1Q9HBL6 345 aa27.78■■■□□ 2.04
VEGFA-211ENST00000476772 AIG1Q9NVV5 245 aa27.78■■■□□ 2.04
VEGFA-211ENST00000476772 DOLKQ9UPQ8 538 aa27.78■■■□□ 2.04
VEGFA-211ENST00000476772 YY2O15391 372 aa27.77■■■□□ 2.04
VEGFA-211ENST00000476772 AQP9O43315 295 aa27.77■■■□□ 2.04
VEGFA-211ENST00000476772 SDC3O75056 442 aa27.77■■■□□ 2.04
VEGFA-211ENST00000476772 RPL38P63173 70 aaKnown RBP27.77■■■□□ 2.04
VEGFA-211ENST00000476772 EMX2Q04743 252 aa27.77■■■□□ 2.04
VEGFA-211ENST00000476772 PRDX1Q06830 199 aaKnown RBP27.77■■■□□ 2.04
VEGFA-211ENST00000476772 CSTF3Q12996 717 aaKnown RBP27.77■■■□□ 2.04
VEGFA-211ENST00000476772 GSTA3Q16772 222 aa27.77■■■□□ 2.04
VEGFA-211ENST00000476772 HIST2H2ACQ16777 129 aaPredicted RBP27.77■■■□□ 2.04
VEGFA-211ENST00000476772 HIST2H2AA3Q6FI13 130 aa27.77■■■□□ 2.04
VEGFA-211ENST00000476772 LAS2Q8IYD9 372 aa27.77■■■□□ 2.04
VEGFA-211ENST00000476772 ADGRF3Q8IZF5 1079 aa27.77■■■□□ 2.04
VEGFA-211ENST00000476772 FBXL6Q8N531 539 aa27.77■■■□□ 2.04
VEGFA-211ENST00000476772 ABHD11Q8NFV4 315 aa27.77■■■□□ 2.04
VEGFA-211ENST00000476772 REPS1Q96D71 796 aa27.77■■■□□ 2.04
VEGFA-211ENST00000476772 CMTM5Q96DZ9 223 aa27.77■■■□□ 2.04
VEGFA-211ENST00000476772 SDK1Q7Z5N4 2213 aa27.77■■■□□ 2.04
VEGFA-211ENST00000476772 LOC100653049A0A140TA62 436 aa27.76■■■□□ 2.03
VEGFA-211ENST00000476772 PSMD12O00232 456 aaPredicted RBP27.76■■■□□ 2.03
VEGFA-211ENST00000476772 BTN3A3O00478 584 aa27.76■■■□□ 2.03
VEGFA-211ENST00000476772 KRT34O76011 436 aa27.76■■■□□ 2.03
VEGFA-211ENST00000476772 RSL1D1O76021 490 aaKnown RBP27.76■■■□□ 2.03
VEGFA-211ENST00000476772 COX4I1P13073 169 aa27.76■■■□□ 2.03
VEGFA-211ENST00000476772 IDO1P14902 403 aa27.76■■■□□ 2.03
VEGFA-211ENST00000476772 GNSP15586 552 aa27.76■■■□□ 2.03
VEGFA-211ENST00000476772 PRDX6P30041 224 aa27.76■■■□□ 2.03
VEGFA-211ENST00000476772 SLC9B2Q86UD5 537 aa27.76■■■□□ 2.03
VEGFA-211ENST00000476772 FAM20CQ8IXL6 584 aa27.76■■■□□ 2.03
VEGFA-211ENST00000476772 HUS1BQ8NHY5 278 aa27.76■■■□□ 2.03
VEGFA-211ENST00000476772 C1orf109Q9NX04 203 aa27.76■■■□□ 2.03
VEGFA-211ENST00000476772 PILRBQ9UKJ0 227 aa27.76■■■□□ 2.03
VEGFA-211ENST00000476772 GPR45Q9Y5Y3 372 aa27.76■■■□□ 2.03
VEGFA-211ENST00000476772 H7BY64 318 aa27.75■■■□□ 2.03
VEGFA-211ENST00000476772 PIAS2O75928 621 aa27.75■■■□□ 2.03
VEGFA-211ENST00000476772 GPX3P22352 226 aa27.75■■■□□ 2.03
VEGFA-211ENST00000476772 CTSKP43235 329 aa27.75■■■□□ 2.03
VEGFA-211ENST00000476772 CCR8P51685 355 aa27.75■■■□□ 2.03
VEGFA-211ENST00000476772 NME5P56597 212 aa27.75■■■□□ 2.03
VEGFA-211ENST00000476772 PAOXQ6QHF9 649 aa27.75■■■□□ 2.03
VEGFA-211ENST00000476772 ZFAND4Q86XD8 727 aa27.75■■■□□ 2.03
VEGFA-211ENST00000476772 PRAP1Q96NZ9 151 aa27.75■■■□□ 2.03
VEGFA-211ENST00000476772 POLR3HQ9Y535 204 aaPredicted RBP27.75■■■□□ 2.03
VEGFA-211ENST00000476772 SNX11Q9Y5W9 270 aa27.75■■■□□ 2.03
VEGFA-211ENST00000476772 IGKV1-8A0A0C4DH67 115 aa27.75■■■□□ 2.03
VEGFA-211ENST00000476772 MAGEB17A8MXT2 336 aa27.75■■■□□ 2.03
VEGFA-211ENST00000476772 ISM1B1AKI9 464 aa27.75■■■□□ 2.03
VEGFA-211ENST00000476772 HNRNPCL1O60812 293 aaKnown RBP27.75■■■□□ 2.03
VEGFA-211ENST00000476772 SEC22BO75396 215 aa27.75■■■□□ 2.03
VEGFA-211ENST00000476772 PRPH2P23942 346 aa27.75■■■□□ 2.03
VEGFA-211ENST00000476772 HHEXQ03014 270 aa27.75■■■□□ 2.03
VEGFA-211ENST00000476772 AGKQ53H12 422 aa27.75■■■□□ 2.03
VEGFA-211ENST00000476772 GK5Q6ZS86 529 aa27.75■■■□□ 2.03
VEGFA-211ENST00000476772 SNX32Q86XE0 403 aa27.75■■■□□ 2.03
VEGFA-211ENST00000476772 KRT78Q8N1N4 520 aa27.75■■■□□ 2.03
VEGFA-211ENST00000476772 MIER2Q8N344 545 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms