RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 TMEM272A0A1B0GTI8 110 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 A0A1B0GWJ7 208 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 TMEM110-MUSTN1A8MSY1 372 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 PRSS46E5RG02 174 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 SLC28A1O00337 649 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 PSMD3O43242 534 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 LDB2O43679 373 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 ITM2AO43736 263 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 OR10H2O60403 315 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 RBMXL2O75526 392 aaKnown RBP3.97□□□□□ -1.77
VPS13D-207ENST00000476169 CXCL10P02778 98 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 SP9P0CG40 484 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 UGT1A1P22309 533 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 IL4RP24394 825 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 CCNCP24863 283 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 HLA-FP30511 346 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 CASQ1P31415 396 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 PTGER4P35408 488 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 NSFP46459 744 aaKnown RBP3.97□□□□□ -1.77
VPS13D-207ENST00000476169 CDX1P47902 265 aaPredicted RBP3.97□□□□□ -1.77
VPS13D-207ENST00000476169 DHPSP49366 369 aaPredicted RBP3.97□□□□□ -1.77
VPS13D-207ENST00000476169 RASSF2P50749 326 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 PLCD1P51178 756 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 CLDN20P56880 219 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 COG7P83436 770 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 BEX3Q00994 111 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 KIF5AQ12840 1032 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 PDZK1IP1Q13113 114 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 SNTB2Q13425 540 aaKnown RBP3.97□□□□□ -1.77
VPS13D-207ENST00000476169 GPR18Q14330 331 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 ZMYND11Q15326 602 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 NPTX1Q15818 432 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 ZNF284Q2VY69 593 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 NADK2Q4G0N4 442 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 WASHC2DQ5SRD0 308 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 C10orf25Q5T742 122 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 WBP2NLQ6ICG8 309 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 C11orf63Q6NUN7 778 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 RGMBQ6NW40 437 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 DBX2Q6ZNG2 339 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 TMEM26Q6ZUK4 368 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 NUDT13Q86X67 352 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 NRROSQ86YC3 692 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 MISPQ8IVT2 679 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 SMYD1Q8NB12 490 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 OR2AK2Q8NG84 335 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 OR56B2PQ8NGI1 322 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 OR10T2Q8NGX3 314 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 LPAR1Q92633 364 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 INPP5DQ92835 1189 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 RFT1Q96AA3 541 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 SLCO4A1Q96BD0 722 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 MAGED4Q96JG8 741 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 TCEANC2Q96MN5 208 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 SPAG8Q99932 426 aaPredicted RBP3.97□□□□□ -1.77
VPS13D-207ENST00000476169 CDK19Q9BWU1 502 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 TSPYL1Q9H0U9 437 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 RMND5AQ9H871 391 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 ROPN1Q9HAT0 212 aaPredicted RBP3.97□□□□□ -1.77
VPS13D-207ENST00000476169 CLK4Q9HAZ1 481 aaKnown RBP3.97□□□□□ -1.77
VPS13D-207ENST00000476169 VAT1LQ9HCJ6 419 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 TM9SF3Q9HD45 589 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 PIGVQ9NUD9 493 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 SMPD3Q9NY59 655 aaPredicted RBP3.97□□□□□ -1.77
VPS13D-207ENST00000476169 COPS7AQ9UBW8 275 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 PADI3Q9ULW8 664 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 MGAT4BQ9UQ53 548 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 ENTPD4Q9Y227 616 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 SH3GLB1Q9Y371 365 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 TMED3Q9Y3Q3 217 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 ASB3Q9Y575 518 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 RAI2Q9Y5P3 530 aa3.97□□□□□ -1.77
VPS13D-207ENST00000476169 SPIN1Q9Y657 262 aaPredicted RBP3.97□□□□□ -1.77
VPS13D-207ENST00000476169 A0A087X0K7 114 aa3.96□□□□□ -1.78
VPS13D-207ENST00000476169 FAM230AA0A1W2PPH8 454 aa3.96□□□□□ -1.78
VPS13D-207ENST00000476169 OR2M5A3KFT3 312 aa3.96□□□□□ -1.78
VPS13D-207ENST00000476169 ANKDD1BA6NHY2 528 aa3.96□□□□□ -1.78
VPS13D-207ENST00000476169 MS4A18H0YCH9 400 aa3.96□□□□□ -1.78
VPS13D-207ENST00000476169 SLC22A2O15244 555 aa3.96□□□□□ -1.78
VPS13D-207ENST00000476169 MAPK13O15264 365 aa3.96□□□□□ -1.78
VPS13D-207ENST00000476169 MAGEB3O15480 346 aa3.96□□□□□ -1.78
VPS13D-207ENST00000476169 HSPA12AO43301 675 aa3.96□□□□□ -1.78
VPS13D-207ENST00000476169 TLX2O43763 284 aaPredicted RBP3.96□□□□□ -1.78
VPS13D-207ENST00000476169 CHRNGP07510 517 aa3.96□□□□□ -1.78
VPS13D-207ENST00000476169 HAPLN1P10915 354 aaPredicted RBP3.96□□□□□ -1.78
VPS13D-207ENST00000476169 IRF2P14316 349 aa3.96□□□□□ -1.78
VPS13D-207ENST00000476169 ATP6V1C1P21283 382 aa3.96□□□□□ -1.78
VPS13D-207ENST00000476169 GNLYP22749 145 aa3.96□□□□□ -1.78
VPS13D-207ENST00000476169 JAK1P23458 1154 aa3.96□□□□□ -1.78
VPS13D-207ENST00000476169 RPL3P39023 403 aaKnown RBP3.96□□□□□ -1.78
VPS13D-207ENST00000476169 ATP5OP48047 213 aa3.96□□□□□ -1.78
VPS13D-207ENST00000476169 ENTPD1P49961 510 aa3.96□□□□□ -1.78
VPS13D-207ENST00000476169 NR0B1P51843 470 aaKnown RBP3.96□□□□□ -1.78
VPS13D-207ENST00000476169 METAP1P53582 386 aa3.96□□□□□ -1.78
VPS13D-207ENST00000476169 HNRNPH2P55795 449 aaKnown RBP3.96□□□□□ -1.78
VPS13D-207ENST00000476169 ZP1P60852 638 aa3.96□□□□□ -1.78
VPS13D-207ENST00000476169 CCNA1P78396 465 aa3.96□□□□□ -1.78
VPS13D-207ENST00000476169 SULT2A1Q06520 285 aa3.96□□□□□ -1.78
VPS13D-207ENST00000476169 GABPB1Q06547 395 aaPredicted RBP3.96□□□□□ -1.78
VPS13D-207ENST00000476169 COX10Q12887 443 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms