RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 ZNF304Q9HCX3 659 aa6.87□□□□□ -1.31
UBE4B-208ENST00000475795 EIF2B3Q9NR50 452 aaKnown RBP6.87□□□□□ -1.31
UBE4B-208ENST00000475795 CHRAC1Q9NRG0 131 aa6.87□□□□□ -1.31
UBE4B-208ENST00000475795 RAB6BQ9NRW1 208 aa6.87□□□□□ -1.31
UBE4B-208ENST00000475795 TREX1Q9NSU2 369 aa6.87□□□□□ -1.31
UBE4B-208ENST00000475795 SPATA7Q9P0W8 599 aa6.87□□□□□ -1.31
UBE4B-208ENST00000475795 PAK5Q9P286 719 aa6.87□□□□□ -1.31
UBE4B-208ENST00000475795 GMPR2Q9P2T1 348 aaKnown RBP6.87□□□□□ -1.31
UBE4B-208ENST00000475795 ZNF282Q9UDV7 671 aaPredicted RBP6.87□□□□□ -1.31
UBE4B-208ENST00000475795 TTC7AQ9ULT0 858 aaPredicted RBP6.87□□□□□ -1.31
UBE4B-208ENST00000475795 ZNF148Q9UQR1 794 aa6.87□□□□□ -1.31
UBE4B-208ENST00000475795 RUVBL2Q9Y230 463 aaKnown RBP6.87□□□□□ -1.31
UBE4B-208ENST00000475795 OSGIN2Q9Y236 505 aa6.87□□□□□ -1.31
UBE4B-208ENST00000475795 NFS1Q9Y697 457 aa6.87□□□□□ -1.31
UBE4B-208ENST00000475795 CAPN6Q9Y6Q1 641 aa6.87□□□□□ -1.31
UBE4B-208ENST00000475795 CELSR2Q9HCU4 2923 aa6.87□□□□□ -1.31
UBE4B-208ENST00000475795 ABCA12Q86UK0 2595 aa6.87□□□□□ -1.31
UBE4B-208ENST00000475795 CACNA1CQ13936 2221 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 IGLV3-12A0A075B6K2 115 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 LOC105369274A0A096LPK9 316 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 LOC102723532A0A0G2JNH3 316 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 A0A1W2PPV9 198 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 OR2A25A4D2G3 310 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 KRT87PA6NCN2 255 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 LRRTM2O43300 516 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 NDUFS3O75489 264 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 USP1O94782 785 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 KLHL18O94889 574 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 ERVK-10P10266 1014 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 ERGP11308 486 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 COX6A1P12074 109 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 BMP2P12643 396 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 FBLP22087 321 aaKnown RBP6.86□□□□□ -1.31
UBE4B-208ENST00000475795 ATP5DP30049 168 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 SOX11P35716 441 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 EIF3BP55884 814 aaKnown RBP6.86□□□□□ -1.31
UBE4B-208ENST00000475795 SESN2P58004 480 aaPredicted RBP6.86□□□□□ -1.31
UBE4B-208ENST00000475795 CRADDP78560 199 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 SNX1Q13596 522 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 GBX1Q14549 363 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 NAA25Q14CX7 972 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 ZRSR2Q15696 482 aaKnown RBP6.86□□□□□ -1.31
UBE4B-208ENST00000475795 MUM1Q2TAK8 710 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 PRTGQ2VWP7 1150 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 CTSL3PQ5NE16 218 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 ATG9BQ674R7 924 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 RPUSD3Q6P087 351 aaKnown RBP6.86□□□□□ -1.31
UBE4B-208ENST00000475795 CNSTQ6PJW8 725 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 FAM180AQ6UWF9 173 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 LINC00696Q6ZRV3 163 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 NDUFAF7Q7L592 441 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 KBTBD2Q8IY47 623 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 PRSS58Q8IYP2 241 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 OR4N4Q8N0Y3 316 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 SLC34A3Q8N130 599 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 RNF10Q8N5U6 811 aaKnown RBP6.86□□□□□ -1.31
UBE4B-208ENST00000475795 BCORP1Q8N888 145 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 CCDC89Q8N998 374 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 CATSPER1Q8NEC5 780 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 MAGEC3Q8TD91 643 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 SKA2Q8WVK7 121 aaPredicted RBP6.86□□□□□ -1.31
UBE4B-208ENST00000475795 C1orf54Q8WWF1 131 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 C8orf44Q96CB5 159 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 FOPNLQ96NB1 174 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 BIRC8Q96P09 236 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 ZFYVE21Q9BQ24 234 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 DESI2Q9BSY9 194 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 DPH7Q9BTV6 452 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 IL22Q9GZX6 179 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 ZNF160Q9HCG1 818 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 OLAHQ9NV23 265 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 ZC3H7BQ9UGR2 993 aaKnown RBP6.86□□□□□ -1.31
UBE4B-208ENST00000475795 C3orf18Q9UK00 162 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 CSMD1Q96PZ7 3565 aa6.86□□□□□ -1.31
UBE4B-208ENST00000475795 NCOA6Q14686 2063 aaPredicted RBP6.86□□□□□ -1.31
UBE4B-208ENST00000475795 NSG1A0A0A6YYJ2 146 aa6.85□□□□□ -1.31
UBE4B-208ENST00000475795 A0A1B0GUH1 482 aa6.85□□□□□ -1.31
UBE4B-208ENST00000475795 A0A1W2PQ72 361 aa6.85□□□□□ -1.31
UBE4B-208ENST00000475795 H0YGG7 62 aa6.85□□□□□ -1.31
UBE4B-208ENST00000475795 MYO1CO00159 1063 aa6.85□□□□□ -1.31
UBE4B-208ENST00000475795 AP3B1O00203 1094 aa6.85□□□□□ -1.31
UBE4B-208ENST00000475795 PRPF4O43172 522 aaKnown RBP eCLIP6.85□□□□□ -1.31
UBE4B-208ENST00000475795 PHF2O75151 1096 aa6.85□□□□□ -1.31
UBE4B-208ENST00000475795 VPS26AO75436 327 aa6.85□□□□□ -1.31
UBE4B-208ENST00000475795 MATN4O95460 622 aa6.85□□□□□ -1.31
UBE4B-208ENST00000475795 EIF2S1P05198 315 aaKnown RBP6.85□□□□□ -1.31
UBE4B-208ENST00000475795 STSP08842 583 aa6.85□□□□□ -1.31
UBE4B-208ENST00000475795 ZSCAN5DPP0CG00 497 aa6.85□□□□□ -1.31
UBE4B-208ENST00000475795 PRR35P0CG20 571 aa6.85□□□□□ -1.31
UBE4B-208ENST00000475795 FDXRP22570 491 aa6.85□□□□□ -1.31
UBE4B-208ENST00000475795 ARNTP27540 789 aa6.85□□□□□ -1.31
UBE4B-208ENST00000475795 NMBRP28336 390 aa6.85□□□□□ -1.31
UBE4B-208ENST00000475795 TNFRSF8P28908 595 aa6.85□□□□□ -1.31
UBE4B-208ENST00000475795 CMPK1P30085 196 aa6.85□□□□□ -1.31
UBE4B-208ENST00000475795 RPL22P35268 128 aaKnown RBP6.85□□□□□ -1.31
UBE4B-208ENST00000475795 NPY2RP49146 381 aa6.85□□□□□ -1.31
UBE4B-208ENST00000475795 TDGF1P3P51864 188 aa6.85□□□□□ -1.31
UBE4B-208ENST00000475795 ARF3P61204 181 aaPredicted RBP6.85□□□□□ -1.31
UBE4B-208ENST00000475795 YBX1P67809 324 aaKnown RBP6.85□□□□□ -1.31
UBE4B-208ENST00000475795 ARG2P78540 354 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms