RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 KLHL41O60662 606 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 ULK1O75385 1050 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 SKAP2O75563 359 aaPredicted RBP6.38□□□□□ -1.39
ATG4A-207ENST00000474825 CRCPO75575 148 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 RSL1D1O76021 490 aaKnown RBP6.38□□□□□ -1.39
ATG4A-207ENST00000474825 KIAA0754O94854 1291 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 LINC00032P0C843 101 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 SLC2A4P14672 509 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 CD46P15529 392 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 GPX3P22352 226 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 AK4P27144 223 aaPredicted RBP6.38□□□□□ -1.39
ATG4A-207ENST00000474825 PIK3R1P27986 724 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 HMOX2P30519 316 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 CNR2P34972 360 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 ACTR1BP42025 376 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 RXRGP48443 463 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 RASSF2P50749 326 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 CORO7P57737 925 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 ACTR1AP61163 376 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 ERVK-8P63133 956 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 ABATP80404 500 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 IRF8Q02556 426 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 RELAQ04206 551 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 PRDX1Q06830 199 aaKnown RBP6.38□□□□□ -1.39
ATG4A-207ENST00000474825 ACTN3Q08043 901 aaPredicted RBP6.38□□□□□ -1.39
ATG4A-207ENST00000474825 ILF3Q12906 894 aaKnown RBP eCLIP6.38□□□□□ -1.39
ATG4A-207ENST00000474825 CSTF3Q12996 717 aaKnown RBP6.38□□□□□ -1.39
ATG4A-207ENST00000474825 CHIT1Q13231 466 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 UBAP2LQ14157 1087 aaKnown RBP6.38□□□□□ -1.39
ATG4A-207ENST00000474825 SQLEQ14534 574 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 KIR2DS5Q14953 304 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 ZRSR2Q15696 482 aaKnown RBP6.38□□□□□ -1.39
ATG4A-207ENST00000474825 ZNF528Q3MIS6 628 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 PDCD4Q53EL6 469 aaKnown RBP6.38□□□□□ -1.39
ATG4A-207ENST00000474825 PAGE2BQ5JRK9 111 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 WDR45BQ5MNZ6 344 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 TCHHL1Q5QJ38 904 aaPredicted RBP6.38□□□□□ -1.39
ATG4A-207ENST00000474825 PRAMEF14Q5SWL7 426 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.38□□□□□ -1.39
ATG4A-207ENST00000474825 PRAMEF13Q5VWM6 474 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 FAM219BQ5XKK7 198 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 FRG2Q64ET8 278 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 TMEM198Q66K66 360 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 PMS2CLQ68D20 193 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 DUS1LQ6P1R4 473 aaKnown RBP6.38□□□□□ -1.39
ATG4A-207ENST00000474825 GALNT18Q6P9A2 607 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 OGFOD3Q6PK18 319 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 IL27RAQ6UWB1 636 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 HID1Q8IV36 788 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 FUNDC1Q8IVP5 155 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 C1orf210Q8IVY1 113 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 SYTL1Q8IYJ3 562 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 RAB42Q8N4Z0 105 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 SNX31Q8N9S9 440 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 PPFIBP2Q8ND30 876 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 PRSS33Q8NF86 280 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 OR7G3Q8NG95 312 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 OR52E1Q8NGJ3 308 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 OR2A1Q8NGT9 310 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 RP9Q8TA86 221 aaKnown RBP6.38□□□□□ -1.39
ATG4A-207ENST00000474825 FLVCR1-AS1Q8TAF5 88 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 GAB3Q8WWW8 586 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 SLC5A11Q8WWX8 675 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 CMTM5Q96DZ9 223 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 ZC3H10Q96K80 434 aaKnown RBP6.38□□□□□ -1.39
ATG4A-207ENST00000474825 PPP3R2Q96LZ3 170 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 HSPA12BQ96MM6 686 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 IL17FQ96PD4 163 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 FRG2BQ96QU4 278 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 FERD3LQ96RJ6 166 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 LRRC61Q9BV99 259 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 GSDMCQ9BYG8 508 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 LRMDAQ9H2I8 198 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 TCEAL2Q9H3H9 227 aaPredicted RBP6.38□□□□□ -1.39
ATG4A-207ENST00000474825 ACTR8Q9H981 624 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 UCK1Q9HA47 277 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 PELI2Q9HAT8 420 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 SLC40A1Q9NP59 571 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 SLC52A3Q9NQ40 469 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 AASDHPPTQ9NRN7 309 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 IMP3Q9NV31 184 aaKnown RBP6.38□□□□□ -1.39
ATG4A-207ENST00000474825 AIG1Q9NVV5 245 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 GEMIN8Q9NWZ8 242 aaKnown RBP6.38□□□□□ -1.39
ATG4A-207ENST00000474825 TAAR2Q9P1P5 351 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 ARMCX1Q9P291 453 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 MOSPD1Q9UJG1 213 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 ZNF490Q9ULM2 529 aaPredicted RBP6.38□□□□□ -1.39
ATG4A-207ENST00000474825 ICKQ9UPZ9 632 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 BTRCQ9Y297 605 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 PTGDR2Q9Y5Y4 395 aa6.38□□□□□ -1.39
ATG4A-207ENST00000474825 ZDBF2Q9HCK1 2354 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 LRP4O75096 1905 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 IGKV1-8A0A0C4DH67 115 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 ATP6AP2A0A1C7CYW4 349 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 PDZK1P1A8MUH7 402 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 GPR37O15354 613 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 LAMTOR5O43504 91 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 TNFSF14O43557 240 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 RGS14O43566 566 aa6.37□□□□□ -1.39
ATG4A-207ENST00000474825 ATP6AP2O75787 350 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms