RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 TAP2Q03519 686 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 SGCGQ13326 291 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 LRRC56Q8IYG6 542 aaPredicted RBP21.04■□□□□ 0.96
CCM2-206ENST00000474617 VPS37AQ8NEZ2 397 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 OR2T12Q8NG77 320 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 SLC5A11Q8WWX8 675 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 LRTOMTQ8WZ04 291 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 NELL1Q92832 810 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 ZNF597Q96LX8 424 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 C9orf16Q9BUW7 83 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 OSBPL11Q9BXB4 747 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 ASF1AQ9Y294 204 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 FAM220BPB1ANY3 271 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 PLRG1O43660 514 aaKnown RBP21.04■□□□□ 0.96
CCM2-206ENST00000474617 DNTTP04053 509 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 PCCBP05166 539 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 ANXA6P08133 673 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 MYCLP1P12525 358 aaPredicted RBP21.04■□□□□ 0.96
CCM2-206ENST00000474617 CDH1P12830 882 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 NPPBP16860 134 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 ZNF26P17031 533 aaPredicted RBP21.04■□□□□ 0.96
CCM2-206ENST00000474617 IL1RNP18510 177 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 CXCR2P25025 360 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 CCSMST1Q4G0I0 132 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 GLYATQ6IB77 296 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 PPP4R4Q6NUP7 873 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 CRTC3Q6UUV7 619 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 XKR5Q6UX68 686 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 KRT78Q8N1N4 520 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 KRTCAP2Q8N6L1 136 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 OR5K2Q8NHB8 316 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 NEIL2Q969S2 332 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 THUMPD3Q9BV44 507 aaKnown RBP21.04■□□□□ 0.96
CCM2-206ENST00000474617 SPATA9Q9BWV2 254 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 UGT2B28Q9BY64 529 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 C8orf33Q9H7E9 229 aaPredicted RBP21.04■□□□□ 0.96
CCM2-206ENST00000474617 VAPAQ9P0L0 249 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 FZD4Q9ULV1 537 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 AP1M2Q9Y6Q5 423 aa21.04■□□□□ 0.96
CCM2-206ENST00000474617 HOXC4P09017 264 aaPredicted RBP21.03■□□□□ 0.96
CCM2-206ENST00000474617 HPCAL1P37235 193 aa21.03■□□□□ 0.96
CCM2-206ENST00000474617 HTR4Q13639 388 aa21.03■□□□□ 0.96
CCM2-206ENST00000474617 NFE2L1Q14494 772 aa21.03■□□□□ 0.96
CCM2-206ENST00000474617 CYP2A13Q16696 494 aa21.03■□□□□ 0.96
CCM2-206ENST00000474617 ANXA8L1Q5VT79 327 aa21.03■□□□□ 0.96
CCM2-206ENST00000474617 TMEM154Q6P9G4 183 aa21.03■□□□□ 0.96
CCM2-206ENST00000474617 NXPE4Q6UWF7 544 aa21.03■□□□□ 0.96
CCM2-206ENST00000474617 IFNEQ86WN2 208 aa21.03■□□□□ 0.96
CCM2-206ENST00000474617 RALGPS2Q86X27 583 aaPredicted RBP21.03■□□□□ 0.96
CCM2-206ENST00000474617 PLA2G15Q8NCC3 412 aa21.03■□□□□ 0.96
CCM2-206ENST00000474617 CHTF18Q8WVB6 975 aa21.03■□□□□ 0.96
CCM2-206ENST00000474617 TFGQ92734 400 aaPredicted RBP21.03■□□□□ 0.96
CCM2-206ENST00000474617 ZNF583Q96ND8 569 aa21.03■□□□□ 0.96
CCM2-206ENST00000474617 PAIP1Q9H074 479 aaKnown RBP21.03■□□□□ 0.96
CCM2-206ENST00000474617 TRIT1Q9H3H1 467 aaKnown RBP21.03■□□□□ 0.96
CCM2-206ENST00000474617 CORO2BQ9UQ03 480 aa21.03■□□□□ 0.96
CCM2-206ENST00000474617 AURKCQ9UQB9 309 aa21.03■□□□□ 0.96
CCM2-206ENST00000474617 WBP11Q9Y2W2 641 aaKnown RBP21.03■□□□□ 0.96
CCM2-206ENST00000474617 GMEB1Q9Y692 573 aa21.03■□□□□ 0.96
CCM2-206ENST00000474617 ELOVL7A1L3X0 281 aa21.02■□□□□ 0.96
CCM2-206ENST00000474617 A6NHS1 94 aa21.02■□□□□ 0.96
CCM2-206ENST00000474617 SMNDC1O75940 238 aaKnown RBP eCLIP21.02■□□□□ 0.96
CCM2-206ENST00000474617 LYNP07948 512 aa21.02■□□□□ 0.96
CCM2-206ENST00000474617 RETP07949 1114 aa21.02■□□□□ 0.96
CCM2-206ENST00000474617 DDX5P17844 614 aaKnown RBP21.02■□□□□ 0.96
CCM2-206ENST00000474617 DRD1P21728 446 aa21.02■□□□□ 0.96
CCM2-206ENST00000474617 PPIBP23284 216 aaKnown RBP21.02■□□□□ 0.96
CCM2-206ENST00000474617 BMP8BP34820 402 aa21.02■□□□□ 0.96
CCM2-206ENST00000474617 ABHD18Q0P651 414 aa21.02■□□□□ 0.96
CCM2-206ENST00000474617 DUOXA1Q1HG43 343 aa21.02■□□□□ 0.96
CCM2-206ENST00000474617 PRAMEF14Q5SWL7 426 aa21.02■□□□□ 0.96
CCM2-206ENST00000474617 TMTC4Q5T4D3 741 aa21.02■□□□□ 0.96
CCM2-206ENST00000474617 PRAMEF13Q5VWM6 474 aa21.02■□□□□ 0.96
CCM2-206ENST00000474617 USP30Q70CQ3 517 aa21.02■□□□□ 0.96
CCM2-206ENST00000474617 TMPRSS11BQ86T26 416 aa21.02■□□□□ 0.96
CCM2-206ENST00000474617 TP53I13Q8NBR0 393 aaPredicted RBP21.02■□□□□ 0.96
CCM2-206ENST00000474617 HUS1BQ8NHY5 278 aa21.02■□□□□ 0.96
CCM2-206ENST00000474617 TSSK3Q96PN8 268 aa21.02■□□□□ 0.96
CCM2-206ENST00000474617 RAB11FIP5Q9BXF6 653 aa21.02■□□□□ 0.96
CCM2-206ENST00000474617 PELI2Q9HAT8 420 aa21.02■□□□□ 0.96
CCM2-206ENST00000474617 ZDHHC4Q9NPG8 344 aa21.02■□□□□ 0.96
CCM2-206ENST00000474617 INVSQ9Y283 1065 aa21.02■□□□□ 0.96
CCM2-206ENST00000474617 A0A1W2PP55 124 aa21.01■□□□□ 0.95
CCM2-206ENST00000474617 EVPLLA8MZ36 301 aa21.01■□□□□ 0.95
CCM2-206ENST00000474617 RFXAPO00287 272 aa21.01■□□□□ 0.95
CCM2-206ENST00000474617 GSTA4O15217 222 aa21.01■□□□□ 0.95
CCM2-206ENST00000474617 KDM1AO60341 852 aa21.01■□□□□ 0.95
CCM2-206ENST00000474617 DFNA5O60443 496 aa21.01■□□□□ 0.95
CCM2-206ENST00000474617 SLC35G4P0C7Q5 338 aa21.01■□□□□ 0.95
CCM2-206ENST00000474617 MTPNP58546 118 aa21.01■□□□□ 0.95
CCM2-206ENST00000474617 MRPS21P82921 87 aaKnown RBP21.01■□□□□ 0.95
CCM2-206ENST00000474617 PDK3Q15120 406 aa21.01■□□□□ 0.95
CCM2-206ENST00000474617 ATP6AP1Q15904 470 aa21.01■□□□□ 0.95
CCM2-206ENST00000474617 TMEM259Q4ZIN3 620 aa21.01■□□□□ 0.95
CCM2-206ENST00000474617 FAM98BQ52LJ0 330 aaKnown RBP21.01■□□□□ 0.95
CCM2-206ENST00000474617 R3HCC1LQ7Z5L2 792 aaKnown RBP21.01■□□□□ 0.95
CCM2-206ENST00000474617 ZNF548Q8NEK5 533 aaPredicted RBP21.01■□□□□ 0.95
CCM2-206ENST00000474617 MSANTD3Q96H12 275 aa21.01■□□□□ 0.95
CCM2-206ENST00000474617 BDH2Q9BUT1 245 aa21.01■□□□□ 0.95
CCM2-206ENST00000474617 KAT8Q9H7Z6 458 aaKnown RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms