RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 COQ5Q5HYK3 327 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 PGM2L1Q6PCE3 622 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 UBALD2Q8IYN6 164 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 PHACTR4Q8IZ21 702 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 RNF175Q8N4F7 328 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 EFCAB3Q8N7B9 438 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 FRMD1Q8N878 549 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 MAFAQ8NHW3 353 aaPredicted RBP19.11■□□□□ 0.65
SSR1-204ENST00000474597 UBE2E3Q969T4 207 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 CCDC124Q96CT7 223 aaKnown RBP19.11■□□□□ 0.65
SSR1-204ENST00000474597 ZMYND15Q9H091 742 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 ADA2Q9NZK5 511 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 TBC1D29Q9UFV1 150 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 LEF1Q9UJU2 399 aaPredicted RBP19.11■□□□□ 0.65
SSR1-204ENST00000474597 A0A1W2PPC4 97 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 PIPSLA2A3N6 862 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 LMNAP02545 664 aaKnown RBP19.11■□□□□ 0.65
SSR1-204ENST00000474597 CDH1P12830 882 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 PCSK2P16519 638 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 JAK1P23458 1154 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 IL12AP29459 219 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 HNRNPH1P31943 449 aaKnown RBP19.11■□□□□ 0.65
SSR1-204ENST00000474597 RAB28P51157 221 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 PHEXP78562 749 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 KIAA0040Q15053 153 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 C10orf62Q5T681 223 aaPredicted RBP19.11■□□□□ 0.65
SSR1-204ENST00000474597 SLC30A9Q6PML9 568 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 RIPOR1Q6ZS17 1223 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 HPS6Q86YV9 775 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 KRT78Q8N1N4 520 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 SPEM1Q8N4L4 309 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 FAM160A2Q8N612 972 aaPredicted RBP19.11■□□□□ 0.65
SSR1-204ENST00000474597 HUS1BQ8NHY5 278 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 APIPQ96GX9 242 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 MENTQ9BUN1 341 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 TMEM168Q9H0V1 697 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 GEMIN8Q9NWZ8 242 aaKnown RBP19.11■□□□□ 0.65
SSR1-204ENST00000474597 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.11■□□□□ 0.65
SSR1-204ENST00000474597 PCDHGA7Q9Y5G6 932 aa19.11■□□□□ 0.65
SSR1-204ENST00000474597 BCKDHAP12694 445 aa19.1■□□□□ 0.65
SSR1-204ENST00000474597 AMD1P17707 334 aa19.1■□□□□ 0.65
SSR1-204ENST00000474597 NDUFS1P28331 727 aa19.1■□□□□ 0.65
SSR1-204ENST00000474597 PXNP49023 591 aaPredicted RBP19.1■□□□□ 0.65
SSR1-204ENST00000474597 ILF3Q12906 894 aaKnown RBP eCLIP19.1■□□□□ 0.656e-8■■■■■ 27.4
SSR1-204ENST00000474597 PTGR1Q14914 329 aa19.1■□□□□ 0.65
SSR1-204ENST00000474597 TIGD2Q4W5G0 525 aa19.1■□□□□ 0.65
SSR1-204ENST00000474597 USP39Q53GS9 565 aaKnown RBP19.1■□□□□ 0.65
SSR1-204ENST00000474597 ABRAXAS1Q6UWZ7 409 aa19.1■□□□□ 0.65
SSR1-204ENST00000474597 WASH2PQ6VEQ5 465 aa19.1■□□□□ 0.65
SSR1-204ENST00000474597 PACS2Q86VP3 889 aa19.1■□□□□ 0.65
SSR1-204ENST00000474597 RETREG3Q86VR2 466 aa19.1■□□□□ 0.65
SSR1-204ENST00000474597 PJA1Q8NG27 643 aa19.1■□□□□ 0.65
SSR1-204ENST00000474597 VPS33AQ96AX1 596 aa19.1■□□□□ 0.65
SSR1-204ENST00000474597 APOLD1Q96LR9 279 aa19.1■□□□□ 0.65
SSR1-204ENST00000474597 CHRDQ9H2X0 955 aa19.1■□□□□ 0.65
SSR1-204ENST00000474597 IL1RL2Q9HB29 575 aa19.1■□□□□ 0.65
SSR1-204ENST00000474597 SPAG4Q9NPE6 437 aa19.1■□□□□ 0.65
SSR1-204ENST00000474597 WASH6PQ9NQA3 447 aa19.1■□□□□ 0.65
SSR1-204ENST00000474597 AASDHPPTQ9NRN7 309 aa19.1■□□□□ 0.65
SSR1-204ENST00000474597 SPATA6Q9NWH7 488 aaPredicted RBP19.1■□□□□ 0.65
SSR1-204ENST00000474597 TRNAU1APQ9NX07 287 aaKnown RBP19.1■□□□□ 0.65
SSR1-204ENST00000474597 LRP4O75096 1905 aa19.1■□□□□ 0.65
SSR1-204ENST00000474597 MAGEB17A8MXT2 336 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 EEDO75530 441 aaKnown RBP19.09■□□□□ 0.65
SSR1-204ENST00000474597 MYO1DO94832 1006 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 PKLRP30613 574 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 ZFP36L2P47974 494 aaKnown RBP19.09■□□□□ 0.65
SSR1-204ENST00000474597 PRMT9Q6P2P2 845 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 GJD3Q8N144 294 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 GLB1L3Q8NCI6 653 aaPredicted RBP19.09■□□□□ 0.65
SSR1-204ENST00000474597 OR52E1Q8NGJ3 308 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 CCL4L1Q8NHW4 92 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 FAM174AQ8TBP5 190 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 NRTNQ99748 197 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 HOPXQ9BPY8 73 aaPredicted RBP19.09■□□□□ 0.65
SSR1-204ENST00000474597 XKR8Q9H6D3 395 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 NMRK1Q9NWW6 199 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 SCHIP1Q9P0W5 487 aaPredicted RBP19.09■□□□□ 0.65
SSR1-204ENST00000474597 PACSIN3Q9UKS6 424 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 FANCMQ8IYD8 2048 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 ANKRD28O15084 1053 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 THEGLP0DJG4 465 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 ACPPP15309 386 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 CXCR2P25025 360 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 DPP6P42658 865 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 MEF2AQ02078 507 aaPredicted RBP19.09■□□□□ 0.65
SSR1-204ENST00000474597 ACSM2AQ08AH3 577 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 NFYCQ13952 458 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 CCDC6Q16204 474 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 ACSM2BQ68CK6 577 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 LAS2Q8IYD9 372 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 OR2L8Q8NGY9 312 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 CXorf40BQ96DE9 158 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 METTL2AQ96IZ6 378 aaKnown RBP19.09■□□□□ 0.65
SSR1-204ENST00000474597 AIF1LQ9BQI0 150 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 ACTL8Q9H568 366 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 PELI2Q9HAT8 420 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 SLC52A3Q9NQ40 469 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 MAP10Q9P2G4 905 aa19.09■□□□□ 0.65
SSR1-204ENST00000474597 POMPQ9Y244 141 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms