RNA–Protein interactions for RNA: ENST00000474528.5

SFXN5-211, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 4,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-211ENST00000474528 PROX1Q92786 737 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 GTPBP3Q969Y2 492 aaKnown RBP11.31□□□□□ -0.6
SFXN5-211ENST00000474528 EID2BQ96D98 161 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 MUS81Q96NY9 551 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 SYNDIG1Q9H7V2 258 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 CXorf21Q9HAI6 301 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 PHPT1Q9NRX4 125 aaPredicted RBP11.31□□□□□ -0.6
SFXN5-211ENST00000474528 COMMD3-BMI1R4GMX3 469 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 MGAMO43451 1857 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 IGLON5A6NGN9 336 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 H7BY64 318 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 BCKDKO14874 412 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 ERN1O75460 977 aaKnown RBP11.31□□□□□ -0.6
SFXN5-211ENST00000474528 IL12AP29459 219 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 ACVR1Q04771 509 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 CSTF3Q12996 717 aaKnown RBP11.31□□□□□ -0.6
SFXN5-211ENST00000474528 TRAF3Q13114 568 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 PARS2Q7L3T8 475 aaKnown RBP11.31□□□□□ -0.6
SFXN5-211ENST00000474528 ANKRD33Q7Z3H0 272 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 SPRED2Q7Z698 418 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 THAP5Q7Z6K1 395 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 ZNF513Q8N8E2 541 aaPredicted RBP11.31□□□□□ -0.6
SFXN5-211ENST00000474528 MAL2Q969L2 176 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 PRAP1Q96NZ9 151 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 APOL4Q9BPW4 351 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 TPT1P8Q9HAU6 139 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 UBAP1Q9NZ09 502 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.31□□□□□ -0.6
SFXN5-211ENST00000474528 SCN4AP35499 1836 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 ARHGEF33A8MVX0 844 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 FOXD2O60548 495 aaPredicted RBP11.31□□□□□ -0.6
SFXN5-211ENST00000474528 CBSLP0DN79 551 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 TIMP2P16035 220 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 ITGB8P26012 769 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 CBSP35520 551 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 DUS1LQ6P1R4 473 aaKnown RBP11.31□□□□□ -0.6
SFXN5-211ENST00000474528 MACC1Q6ZN28 852 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 CXorf40BQ96DE9 158 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 AIF1LQ9BQI0 150 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 C5AR2Q9P296 337 aa11.31□□□□□ -0.6
SFXN5-211ENST00000474528 C7orf72A4D263 438 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 RFXAPO00287 272 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 SLC28A2O43868 658 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 FADS2O95864 444 aaKnown RBP11.3□□□□□ -0.6
SFXN5-211ENST00000474528 FABP3P05413 133 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 ZNF8P17098 575 aaPredicted RBP11.3□□□□□ -0.6
SFXN5-211ENST00000474528 NUP107P57740 925 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 TBPL1P62380 186 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 MEP1AQ16819 746 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 KCTD21Q4G0X4 260 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 PRAMEF14Q5SWL7 426 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 PRAMEF13Q5VWM6 474 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 RNF111Q6ZNA4 994 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 FAM20CQ8IXL6 584 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 TMCO5AQ8N6Q1 288 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 STARD8Q92502 1023 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 UBE2E3Q969T4 207 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 TMIGD2Q96BF3 282 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 CEP295NLQ96MC4 621 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 SLC29A3Q9BZD2 475 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 RETREG1Q9H6L5 497 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 DMTF1Q9Y222 760 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 PCDHB14Q9Y5E9 798 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 ACOT8O14734 319 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 LSM1O15116 133 aaKnown RBP11.3□□□□□ -0.6
SFXN5-211ENST00000474528 RASGRP1O95267 797 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 MATN4O95460 622 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 IFNA14P01570 189 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 TNFRSF1BP20333 461 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 PPP2R1BP30154 601 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 PTGER1P34995 402 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 ASMTP46597 345 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 SRSF11Q05519 484 aaKnown RBP11.3□□□□□ -0.6
SFXN5-211ENST00000474528 ANXA8L1Q5VT79 327 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 TRIM40Q6P9F5 258 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 FBXO46Q6PJ61 603 aaPredicted RBP11.3□□□□□ -0.6
SFXN5-211ENST00000474528 VTCN1Q7Z7D3 282 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 TICAM1Q8IUC6 712 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 C11orf65Q8NCR3 313 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 NACC2Q96BF6 587 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 TBC1D23Q9NUY8 699 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 CHCHD3Q9NX63 227 aaKnown RBP11.3□□□□□ -0.6
SFXN5-211ENST00000474528 FBXL12Q9NXK8 326 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 TRPS1Q9UHF7 1281 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 NCKAP1Q9Y2A7 1128 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 MYOFQ9NZM1 2061 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 TAPBPO15533 448 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 TRMUO75648 421 aaKnown RBP11.3□□□□□ -0.6
SFXN5-211ENST00000474528 C6orf47O95873 294 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 CXCL10P02778 98 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 LAMP1P11279 417 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 BUD31P41223 144 aaPredicted RBP11.3□□□□□ -0.6
SFXN5-211ENST00000474528 ERVK-21P61565 698 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 EIF4EBP2Q13542 120 aaPredicted RBP11.3□□□□□ -0.6
SFXN5-211ENST00000474528 UGT3A2Q3SY77 523 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 GPAT3Q53EU6 434 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 PLEKHS1Q5SXH7 462 aa11.3□□□□□ -0.6
SFXN5-211ENST00000474528 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.3□□□□□ -0.6
SFXN5-211ENST00000474528 ASTLQ6HA08 431 aaPredicted RBP11.3□□□□□ -0.6
SFXN5-211ENST00000474528 ARMC6Q6NXE6 501 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms