RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 POLR1CO15160 346 aaPredicted RBP18.08■□□□□ 0.49
ECHDC1-214ENST00000474289 CA12O43570 354 aa18.08■□□□□ 0.49
ECHDC1-214ENST00000474289 OTCP00480 354 aa18.08■□□□□ 0.49
ECHDC1-214ENST00000474289 C1QCP02747 245 aa18.08■□□□□ 0.49
ECHDC1-214ENST00000474289 ITGB1P05556 798 aa18.08■□□□□ 0.49
ECHDC1-214ENST00000474289 HOXB9P17482 250 aaPredicted RBP18.08■□□□□ 0.49
ECHDC1-214ENST00000474289 ST3GAL4Q11206 333 aa18.08■□□□□ 0.49
ECHDC1-214ENST00000474289 TRIM60Q495X7 471 aa18.08■□□□□ 0.49
ECHDC1-214ENST00000474289 UBXN11Q5T124 520 aa18.08■□□□□ 0.49
ECHDC1-214ENST00000474289 MOB2Q70IA6 237 aa18.08■□□□□ 0.49
ECHDC1-214ENST00000474289 TTC16Q8NEE8 873 aa18.08■□□□□ 0.49
ECHDC1-214ENST00000474289 FATE1Q969F0 183 aa18.08■□□□□ 0.49
ECHDC1-214ENST00000474289 RNF31Q96EP0 1072 aa18.08■□□□□ 0.49
ECHDC1-214ENST00000474289 NUDT4Q9NZJ9 180 aa18.08■□□□□ 0.49
ECHDC1-214ENST00000474289 GABRQQ9UN88 632 aa18.08■□□□□ 0.49
ECHDC1-214ENST00000474289 SPEF1Q9Y4P9 236 aa18.08■□□□□ 0.49
ECHDC1-214ENST00000474289 IPPQ9Y573 584 aa18.08■□□□□ 0.49
ECHDC1-214ENST00000474289 PPP2R3BQ9Y5P8 575 aa18.08■□□□□ 0.49
ECHDC1-214ENST00000474289 OTOFQ9HC10 1997 aa18.08■□□□□ 0.49
ECHDC1-214ENST00000474289 DNAH12Q6ZR08 3092 aa18.08■□□□□ 0.48
ECHDC1-214ENST00000474289 OR6C70A6NIJ9 312 aa18.08■□□□□ 0.48
ECHDC1-214ENST00000474289 MEN1O00255 615 aa18.08■□□□□ 0.48
ECHDC1-214ENST00000474289 PKMP14618 531 aaKnown RBP18.08■□□□□ 0.48
ECHDC1-214ENST00000474289 CD72P21854 359 aa18.08■□□□□ 0.48
ECHDC1-214ENST00000474289 GGT2P36268 569 aa18.08■□□□□ 0.48
ECHDC1-214ENST00000474289 ITGA1P56199 1179 aa18.08■□□□□ 0.48
ECHDC1-214ENST00000474289 FAPQ12884 760 aa18.08■□□□□ 0.48
ECHDC1-214ENST00000474289 CTSL3PQ5NE16 218 aa18.08■□□□□ 0.48
ECHDC1-214ENST00000474289 SYCE2Q6PIF2 218 aa18.08■□□□□ 0.48
ECHDC1-214ENST00000474289 DOK6Q6PKX4 331 aa18.08■□□□□ 0.48
ECHDC1-214ENST00000474289 ATCAYQ86WG3 371 aa18.08■□□□□ 0.48
ECHDC1-214ENST00000474289 HSH2DQ96JZ2 352 aa18.08■□□□□ 0.48
ECHDC1-214ENST00000474289 TSEN34Q9BSV6 310 aaKnown RBP18.08■□□□□ 0.48
ECHDC1-214ENST00000474289 AASDHPPTQ9NRN7 309 aa18.08■□□□□ 0.48
ECHDC1-214ENST00000474289 OLA1Q9NTK5 396 aaKnown RBP18.08■□□□□ 0.48
ECHDC1-214ENST00000474289 B8ZZF3 427 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 C9P02748 559 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 NUDT1P36639 197 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 MLLT3P42568 568 aaPredicted RBP18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 GNPDA1P46926 289 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 ZNF140P52738 457 aaPredicted RBP18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 MLLT6P55198 1093 aaPredicted RBP18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 TARDBPQ13148 414 aaKnown RBP eCLIP18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 TRIM71Q2Q1W2 868 aaKnown RBP18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 KIAA1841Q6NSI8 718 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 C19orf48Q6RUI8 117 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 LAX1Q8IWV1 398 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 OR5M11Q96RB7 305 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 BBS2Q9BXC9 721 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 SARS2Q9NP81 518 aaKnown RBP18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 TIGARQ9NQ88 270 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 ABCB8Q9NUT2 735 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 NLE1Q9NVX2 485 aaPredicted RBP18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 MAN2B2Q9Y2E5 1009 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 ZNF451Q9Y4E5 1061 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 CCDC182A6NF36 153 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 PLK4O00444 970 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 CDK2AP1O14519 115 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 TSTQ16762 297 aaKnown RBP18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 ALFQ53S48 1182 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 TMPRSS11AQ6ZMR5 421 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 ADAMTSL2Q86TH1 951 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 TRIM48Q8IWZ4 208 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 PIANPQ8IYJ0 282 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 OR4K2Q8NGD2 314 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 UBASH3BQ8TF42 649 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 COQ8BQ96D53 544 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 C1orf74Q96LT6 269 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 BARHL1Q9BZE3 327 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 SRRQ9GZT4 340 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 MROH8Q9H579 483 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 FNIP2Q9P278 1114 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 CPA4Q9UI42 421 aa18.07■□□□□ 0.48
ECHDC1-214ENST00000474289 EFCAB10A6NFE3 127 aa18.06■□□□□ 0.48
ECHDC1-214ENST00000474289 ADM5C9JUS6 153 aa18.06■□□□□ 0.48
ECHDC1-214ENST00000474289 MYL9P24844 172 aa18.06■□□□□ 0.48
ECHDC1-214ENST00000474289 ERP29P30040 261 aaKnown RBP18.06■□□□□ 0.48
ECHDC1-214ENST00000474289 IDH2P48735 452 aaKnown RBP18.06■□□□□ 0.48
ECHDC1-214ENST00000474289 DAB2P98082 770 aa18.06■□□□□ 0.48
ECHDC1-214ENST00000474289 TIMM50Q3ZCQ8 353 aa18.06■□□□□ 0.48
ECHDC1-214ENST00000474289 USP39Q53GS9 565 aaKnown RBP18.06■□□□□ 0.48
ECHDC1-214ENST00000474289 SGO1Q5FBB7 561 aa18.06■□□□□ 0.48
ECHDC1-214ENST00000474289 AFTPHQ6ULP2 937 aa18.06■□□□□ 0.48
ECHDC1-214ENST00000474289 TMEM86AQ8N2M4 240 aa18.06■□□□□ 0.48
ECHDC1-214ENST00000474289 DNAJB8Q8NHS0 232 aa18.06■□□□□ 0.48
ECHDC1-214ENST00000474289 SLC22A4Q9H015 551 aa18.06■□□□□ 0.48
ECHDC1-214ENST00000474289 LRTM1Q9HBL6 345 aa18.06■□□□□ 0.48
ECHDC1-214ENST00000474289 ABCC13Q9NSE7 274 aa18.06■□□□□ 0.48
ECHDC1-214ENST00000474289 RIMKLBQ9ULI2 386 aa18.06■□□□□ 0.48
ECHDC1-214ENST00000474289 TNPO3Q9Y5L0 923 aaKnown RBP18.06■□□□□ 0.48
ECHDC1-214ENST00000474289 GPX5O75715 221 aa18.06■□□□□ 0.48
ECHDC1-214ENST00000474289 MMP3P08254 477 aa18.06■□□□□ 0.48
ECHDC1-214ENST00000474289 BCKDHAP12694 445 aa18.06■□□□□ 0.48
ECHDC1-214ENST00000474289 NKX3-2P78367 333 aa18.06■□□□□ 0.48
ECHDC1-214ENST00000474289 DOC2BQ14184 412 aa18.06■□□□□ 0.48
ECHDC1-214ENST00000474289 MED22Q15528 200 aa18.06■□□□□ 0.48
ECHDC1-214ENST00000474289 TOR1AIP1Q5JTV8 583 aa18.06■□□□□ 0.48
ECHDC1-214ENST00000474289 PSAPL1Q6NUJ1 521 aa18.06■□□□□ 0.48
ECHDC1-214ENST00000474289 RGMBQ6NW40 437 aa18.06■□□□□ 0.48
ECHDC1-214ENST00000474289 ZNF367Q7RTV3 350 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms