RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 TET1Q8NFU7 2136 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 VPS13AQ96RL7 3174 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 WDFY3Q8IZQ1 3526 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 ATG2AQ2TAZ0 1938 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 GREB1Q4ZG55 1949 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 MYO7AQ13402 2215 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 LAMA1P25391 3075 aa1.46□□□□□ -2.18
CCDC39-203ENST00000473854 KIAA1671Q9BY89 1806 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 SCN10AQ9Y5Y9 1956 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 SPEGQ15772 3267 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 VWA8A3KMH1 1905 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 ANKRD36A6QL64 1941 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 PTPRSQ13332 1948 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 DENND4CQ5VZ89 1909 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 FAM237AA0A1B0GTK4 181 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 GAGE10A6NGK3 116 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 RRN3P2A6NIE6 340 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 ASB14A6NK59 587 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 TTC36A6NLP5 189 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 YDJCA8MPS7 323 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 USP17L23D6RBM5 183 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 H3BQV1 296 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 M0QZ24 198 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 ZNF197O14709 1029 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 IFIT3O14879 490 aaKnown RBP1.45□□□□□ -2.18
CCDC39-203ENST00000473854 ZBTB43O43298 467 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 CYTH3O43739 400 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 WDHD1O75717 1129 aaPredicted RBP1.45□□□□□ -2.18
CCDC39-203ENST00000473854 SEC31AO94979 1220 aaKnown RBP1.45□□□□□ -2.18
CCDC39-203ENST00000473854 MELTFP08582 738 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 HOXB5P09067 269 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 HSD3B1P14060 373 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 IFNAR1P17181 557 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 PTMSP20962 102 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 BTDP43251 543 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 MAPK9P45984 424 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 TUBP50607 506 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 PRELPP51888 382 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 NDUFA8P51970 172 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 CTSCP53634 463 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 HMGN5P82970 282 aaKnown RBP1.45□□□□□ -2.18
CCDC39-203ENST00000473854 CYCSP99999 105 aaKnown RBP1.45□□□□□ -2.18
CCDC39-203ENST00000473854 CEBPZQ03701 1054 aaKnown RBP1.45□□□□□ -2.18
CCDC39-203ENST00000473854 GABPAQ06546 454 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 GPR17Q13304 367 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 BIRC3Q13489 604 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 EFR3AQ14156 821 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 FGFBP1Q14512 234 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 WTAPQ15007 396 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 P2RY6Q15077 328 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 TAF12Q16514 161 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 TMEM95Q3KNT9 176 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 SLC9B1Q4ZJI4 515 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 SBK1Q52WX2 424 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 CAVIN4Q5BKX8 364 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 MAP3K21Q5TCX8 1036 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 NDUFAF5Q5TEU4 345 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 C12orf60Q5U649 245 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 ZSCAN25Q6NSZ9 544 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 CTR9Q6PD62 1173 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 C11orf57Q6ZUT1 292 aaPredicted RBP1.45□□□□□ -2.18
CCDC39-203ENST00000473854 TMTC3Q6ZXV5 915 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 DPPA4Q7L190 304 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 LRRC8DQ7L1W4 858 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 DEFB132Q7Z7B7 95 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 LRRTM4Q86VH4 590 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 DZIP1Q86YF9 867 aaKnown RBP1.45□□□□□ -2.18
CCDC39-203ENST00000473854 DIS3L2Q8IYB7 885 aaKnown RBP1.45□□□□□ -2.18
CCDC39-203ENST00000473854 TEX11Q8IYF3 940 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 CPXCR1Q8N123 301 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 PAF1Q8N7H5 531 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 FAM184AQ8NB25 1140 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 Q8NBF4 154 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 LINC00301Q8NCQ3 95 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 OR2T11Q8NH01 316 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 LRRC15Q8TF66 581 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 TRIM63Q969Q1 353 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 MAELQ96JY0 434 aaKnown RBP1.45□□□□□ -2.18
CCDC39-203ENST00000473854 C8orf76Q96K31 380 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 HARBI1Q96MB7 349 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 SMC6Q96SB8 1091 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 ACOX2Q99424 681 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 SLX1AQ9BQ83 275 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 LLPHQ9BRT6 129 aaKnown RBP1.45□□□□□ -2.18
CCDC39-203ENST00000473854 SLC26A6Q9BXS9 759 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 ANKRD2Q9GZV1 360 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 HSD3B7Q9H2F3 369 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 CPVLQ9H3G5 476 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 TSPY26PQ9H489 355 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 DBNDD1Q9H9R9 158 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 SLC28A3Q9HAS3 691 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 CD209Q9NNX6 404 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 VPS54Q9P1Q0 977 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 KLHL9Q9P2J3 617 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 ORC3Q9UBD5 711 aaPredicted RBP1.45□□□□□ -2.18
CCDC39-203ENST00000473854 SLC25A10Q9UBX3 287 aaPredicted RBP1.45□□□□□ -2.18
CCDC39-203ENST00000473854 CTNNA3Q9UI47 895 aa1.45□□□□□ -2.18
CCDC39-203ENST00000473854 ISY1Q9ULR0 285 aaKnown RBP1.45□□□□□ -2.18
CCDC39-203ENST00000473854 NAP1L2Q9ULW6 460 aaPredicted RBP1.45□□□□□ -2.18
CCDC39-203ENST00000473854 WDR37Q9Y2I8 494 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms