RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 GABARAPO95166 117 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 KCNK5O95279 499 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 CCDC159P0C7I6 412 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 ITGAMP11215 1152 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 AMD1P17707 334 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 IL1RNP18510 177 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 NSG1P42857 185 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 SLC6A12P48065 614 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 ALDH7A1P49419 539 aaKnown RBP10.62□□□□□ -0.71
C9orf3-214ENST00000473778 RAD23AP54725 363 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 VBP1P61758 197 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 ABHD18Q0P651 414 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 SREBF2Q12772 1141 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 IQCCQ4KMZ1 466 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 ZC3H12BQ5HYM0 836 aaKnown RBP10.62□□□□□ -0.71
C9orf3-214ENST00000473778 CAPN13Q6MZZ7 669 aaPredicted RBP10.62□□□□□ -0.71
C9orf3-214ENST00000473778 ZCCHC8Q6NZY4 707 aaKnown RBP10.62□□□□□ -0.71
C9orf3-214ENST00000473778 TMCO2Q7Z6W1 182 aaPredicted RBP10.62□□□□□ -0.71
C9orf3-214ENST00000473778 TMEM132CQ8N3T6 1108 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 PAF1Q8N7H5 531 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 FOXJ1Q92949 421 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 ERLEC1Q96DZ1 483 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 TRMT2BQ96GJ1 504 aaKnown RBP10.62□□□□□ -0.71
C9orf3-214ENST00000473778 DCBLD2Q96PD2 775 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 TMEM175Q9BSA9 504 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 ATG10Q9H0Y0 220 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 DUSP21Q9H596 190 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 ELOVL6Q9H5J4 265 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 AKIP1Q9NQ31 210 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 PCDHGB1Q9Y5G3 927 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 BACE2Q9Y5Z0 518 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 KIAA1671Q9BY89 1806 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 HELZP42694 1942 aaKnown RBP10.61□□□□□ -0.71
C9orf3-214ENST00000473778 DENND4CQ5VZ89 1909 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 MYO1GB0I1T2 1018 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 RECQL5O94762 991 aaPredicted RBP10.61□□□□□ -0.71
C9orf3-214ENST00000473778 UGT2B4P06133 528 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 NUDT7P0C024 238 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 DGCR6Q14129 220 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 TAF12Q16514 161 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 GPR33Q49SQ1 333 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 EGFLAMQ63HQ2 1017 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 OR2T5Q6IEZ7 315 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.61□□□□□ -0.71
C9orf3-214ENST00000473778 HIPK1Q86Z02 1210 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 BBS7Q8IWZ6 715 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 ZZZ3Q8IYH5 903 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 OR2T29Q8NH02 315 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 SKA2Q8WVK7 121 aaPredicted RBP10.61□□□□□ -0.71
C9orf3-214ENST00000473778 ASB11Q8WXH4 323 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 MYLIPQ8WY64 445 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 RPL3LQ92901 407 aaKnown RBP10.61□□□□□ -0.71
C9orf3-214ENST00000473778 IGSF21Q96ID5 467 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 C2orf49Q9BVC5 232 aaPredicted RBP10.61□□□□□ -0.71
C9orf3-214ENST00000473778 BBS2Q9BXC9 721 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 IL21Q9HBE4 155 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 KCTD5Q9NXV2 234 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 TMEM229AB2RXF0 380 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 CCNDBP1O95273 360 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 MT-ND2P03891 347 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 ENGP17813 658 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 EIF2B2P49770 351 aaKnown RBP10.61□□□□□ -0.71
C9orf3-214ENST00000473778 NCS1P62166 190 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 MTAPQ13126 283 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 BOP1Q14137 746 aaKnown RBP10.61□□□□□ -0.71
C9orf3-214ENST00000473778 NPTX1Q15818 432 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 GGTA1PQ4G0N0 100 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 SMUG1Q53HV7 270 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 TMEM236Q5W0B7 351 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 KIAA1841Q6NSI8 718 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 NOXRED1Q6NXP6 359 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 METTL2BQ6P1Q9 378 aaKnown RBP10.61□□□□□ -0.71
C9orf3-214ENST00000473778 Q6ZPB1 254 aaPredicted RBP10.61□□□□□ -0.71
C9orf3-214ENST00000473778 CYP2U1Q7Z449 544 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 TMCO5AQ8N6Q1 288 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 L3MBTL4Q8NA19 623 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 ALPK1Q96QP1 1244 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 ZNF347Q96SE7 839 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 SLC12A9Q9BXP2 914 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 GABARAPL1Q9H0R8 117 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 PALMDQ9NP74 551 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 TMEM184CQ9NVA4 438 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 TRNAU1APQ9NX07 287 aaKnown RBP10.61□□□□□ -0.71
C9orf3-214ENST00000473778 ZDHHC3Q9NYG2 299 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 SNX5Q9Y5X3 404 aa10.61□□□□□ -0.71
C9orf3-214ENST00000473778 UNC80Q8N2C7 3258 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 USP34Q70CQ2 3546 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 IGLV3-16A0A075B6K0 115 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 TMEM202A6NGA9 273 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 CLIC1O00299 241 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 SOCS5O75159 536 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 SH3BGRLO75368 114 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 WBP4O75554 376 aaKnown RBP10.6□□□□□ -0.71
C9orf3-214ENST00000473778 JRKO75564 520 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 FADS2O95864 444 aaKnown RBP10.6□□□□□ -0.71
C9orf3-214ENST00000473778 JUNDP17535 347 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 PRPH2P23942 346 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 HPCAL1P37235 193 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 KIR3DL1P43629 444 aa10.6□□□□□ -0.71
C9orf3-214ENST00000473778 PFN3P60673 137 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms