RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 CA5BP1Q8WTZ4 195 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 ALG3Q92685 438 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 HDAC10Q969S8 669 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 MIEF2Q96C03 454 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 SELENOSQ9BQE4 189 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.86□□□□□ -0.99
VCL-204ENST00000472585 TINAGQ9UJW2 476 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 NXT1Q9UKK6 140 aaKnown RBP8.86□□□□□ -0.99
VCL-204ENST00000472585 INTUQ9ULD6 942 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 RUVBL2Q9Y230 463 aaKnown RBP8.86□□□□□ -0.99
VCL-204ENST00000472585 R3HDM2Q9Y2K5 976 aaKnown RBP8.86□□□□□ -0.99
VCL-204ENST00000472585 KLK4Q9Y5K2 254 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 NFS1Q9Y697 457 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 AKAP6Q13023 2319 aa8.86□□□□□ -0.99
VCL-204ENST00000472585 JMJD1CQ15652 2540 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 NSG1A0A0A6YYJ2 146 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 FOXO6A8MYZ6 492 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 IDSB3KWA1 339 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 TARM1B6A8C7 271 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 RASGRF2O14827 1237 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 PJA2O43164 708 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 FOXS1O43638 330 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 SRPX2O60687 465 aaPredicted RBP8.85□□□□□ -0.99
VCL-204ENST00000472585 MFAP3LO75121 409 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 BMP10O95393 424 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 MLYCDO95822 493 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 GOT2P00505 430 aaKnown RBP8.85□□□□□ -0.99
VCL-204ENST00000472585 FTH1P02794 183 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 SERPINA7P05543 415 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 OR56A5P0C7T3 313 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 AOAHP28039 575 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 CTNNA1P35221 906 aaKnown RBP8.85□□□□□ -0.99
VCL-204ENST00000472585 LONRF1Q17RB8 773 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 SYT16Q17RD7 645 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 PARP6Q2NL67 630 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 PRTGQ2VWP7 1150 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 DNAJC21Q5F1R6 531 aaKnown RBP8.85□□□□□ -0.99
VCL-204ENST00000472585 ZC3H12BQ5HYM0 836 aaKnown RBP8.85□□□□□ -0.99
VCL-204ENST00000472585 TCTE1Q5JU00 501 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 HIBCHQ6NVY1 386 aaPredicted RBP8.85□□□□□ -0.99
VCL-204ENST00000472585 LIAT1Q6ZQX7 453 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 NLRP9Q7RTR0 991 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 CDKL3Q8IVW4 592 aaPredicted RBP8.85□□□□□ -0.99
VCL-204ENST00000472585 VSTM4Q8IW00 320 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 CHERPQ8IWX8 916 aaKnown RBP8.85□□□□□ -0.99
VCL-204ENST00000472585 FAM71DQ8N9W8 422 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 OR2L3Q8NG85 312 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 ZUFSPQ96AP4 578 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 IMMP1LQ96LU5 166 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 NPAS2Q99743 824 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 MIPEPQ99797 713 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 HES7Q9BYE0 225 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 OSBPL8Q9BZF1 889 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 GSX1Q9H4S2 264 aaPredicted RBP8.85□□□□□ -0.99
VCL-204ENST00000472585 IL1RAPL1Q9NZN1 696 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 MARCH4Q9P2E8 410 aaPredicted RBP8.85□□□□□ -0.99
VCL-204ENST00000472585 ZNF282Q9UDV7 671 aaPredicted RBP8.85□□□□□ -0.99
VCL-204ENST00000472585 FEZ2Q9UHY8 353 aaPredicted RBP8.85□□□□□ -0.99
VCL-204ENST00000472585 ZNF835Q9Y2P0 537 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 MEMO1Q9Y316 297 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 PCDHA3Q9Y5H8 950 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 DUSP10Q9Y6W6 482 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 RTTNQ86VV8 2226 aa8.85□□□□□ -0.99
VCL-204ENST00000472585 LOC102723996A0A087X1L8 192 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 IGHV3-20A0A0C4DH32 117 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 IGKV1-8A0A0C4DH67 115 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 A0A0U1RQJ8 604 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 TCRBV7S2A1N4TA0A589 114 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 OR2A25A4D2G3 310 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 OR2W5A6NFC9 320 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 H0YGG7 62 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 GOLGA6L22H0YM25 854 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 ADAM10O14672 748 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 MAP2K7O14733 419 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 MAN1A2O60476 641 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 SLCO2B1O94956 709 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 C1orf105O95561 183 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 EIF2S1P05198 315 aaKnown RBP8.84□□□□□ -0.99
VCL-204ENST00000472585 DNAJA1P31689 397 aaKnown RBP8.84□□□□□ -0.99
VCL-204ENST00000472585 SLC26A3P40879 764 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 MAGEA1P43355 309 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 BDKRB1P46663 353 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 CARSP49589 748 aaKnown RBP8.84□□□□□ -0.99
VCL-204ENST00000472585 IST1P53990 364 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 EMP2P54851 167 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 ARF3P61204 181 aaPredicted RBP8.84□□□□□ -0.99
VCL-204ENST00000472585 PLOD1Q02809 727 aaPredicted RBP8.84□□□□□ -0.99
VCL-204ENST00000472585 HKDC1Q2TB90 917 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 FAM214AQ32MH5 1076 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 TMEM205Q6UW68 189 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 RNF44Q7L0R7 432 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 DCUN1D3Q8IWE4 304 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 EID3Q8N140 333 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 TTC29Q8NA56 475 aaPredicted RBP8.84□□□□□ -0.99
VCL-204ENST00000472585 OR52K1Q8NGK4 314 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 NANOS1Q8WY41 292 aaKnown RBP8.84□□□□□ -0.99
VCL-204ENST00000472585 FOXC2Q99958 501 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 ZNF559Q9BR84 538 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 TMEM121Q9BTD3 319 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 CARD6Q9BX69 1037 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms