RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 YIPF2Q9BWQ6 316 aa14.18□□□□□ -0.14
SSR4-208ENST00000471880 PARVBQ9HBI1 364 aa14.18□□□□□ -0.14
SSR4-208ENST00000471880 ACSS2Q9NR19 701 aa14.18□□□□□ -0.14
SSR4-208ENST00000471880 ARL15Q9NXU5 204 aa14.18□□□□□ -0.14
SSR4-208ENST00000471880 NSMCE4AQ9NXX6 385 aa14.18□□□□□ -0.14
SSR4-208ENST00000471880 GRHL1Q9NZI5 618 aa14.18□□□□□ -0.14
SSR4-208ENST00000471880 PDE10AQ9Y233 779 aa14.18□□□□□ -0.14
SSR4-208ENST00000471880 MAU2Q9Y6X3 613 aa14.18□□□□□ -0.14
SSR4-208ENST00000471880 LOC105369274A0A096LPK9 316 aa14.17□□□□□ -0.14
SSR4-208ENST00000471880 LOC102723532A0A0G2JNH3 316 aa14.17□□□□□ -0.14
SSR4-208ENST00000471880 A0A1B0GX78 115 aa14.17□□□□□ -0.14
SSR4-208ENST00000471880 HYKKA2RU49 373 aa14.17□□□□□ -0.14
SSR4-208ENST00000471880 B8ZZF3 427 aa14.17□□□□□ -0.14
SSR4-208ENST00000471880 E7ESA3 106 aa14.17□□□□□ -0.14
SSR4-208ENST00000471880 DSCR3O14972 297 aa14.17□□□□□ -0.14
SSR4-208ENST00000471880 EIF3HO15372 352 aaKnown RBP eCLIP14.17□□□□□ -0.14
SSR4-208ENST00000471880 SRPX2O60687 465 aaPredicted RBP14.17□□□□□ -0.14
SSR4-208ENST00000471880 STATHP02808 62 aa14.17□□□□□ -0.14
SSR4-208ENST00000471880 PIM1P11309 404 aaPredicted RBP14.17□□□□□ -0.14
SSR4-208ENST00000471880 FDXRP22570 491 aa14.17□□□□□ -0.14
SSR4-208ENST00000471880 CCL11P51671 97 aa14.17□□□□□ -0.14
SSR4-208ENST00000471880 FOXL2P58012 376 aa14.17□□□□□ -0.14
SSR4-208ENST00000471880 TIAL1Q01085 375 aaKnown RBP eCLIP14.17□□□□□ -0.14
SSR4-208ENST00000471880 CAV1Q03135 178 aa14.17□□□□□ -0.14
SSR4-208ENST00000471880 SP140Q13342 867 aa14.17□□□□□ -0.14
SSR4-208ENST00000471880 NAE1Q13564 534 aa14.17□□□□□ -0.14
SSR4-208ENST00000471880 FAM214AQ32MH5 1076 aa14.17□□□□□ -0.14
SSR4-208ENST00000471880 PRAMEF13Q5VWM6 474 aa14.17□□□□□ -0.14
SSR4-208ENST00000471880 CPZQ66K79 652 aa14.17□□□□□ -0.14
SSR4-208ENST00000471880 AGTRAPQ6RW13 159 aa14.17□□□□□ -0.14
SSR4-208ENST00000471880 ZNF517Q6ZMY9 492 aaPredicted RBP14.17□□□□□ -0.14
SSR4-208ENST00000471880 GALNT7Q86SF2 657 aa14.17□□□□□ -0.14
SSR4-208ENST00000471880 SLC26A11Q86WA9 606 aa14.17□□□□□ -0.14
SSR4-208ENST00000471880 OR4N4Q8N0Y3 316 aa14.17□□□□□ -0.14
SSR4-208ENST00000471880 FBXO15Q8NCQ5 510 aaPredicted RBP14.17□□□□□ -0.14
SSR4-208ENST00000471880 COL26A1Q96A83 441 aa14.17□□□□□ -0.14
SSR4-208ENST00000471880 ABHD17AQ96GS6 310 aa14.17□□□□□ -0.14
SSR4-208ENST00000471880 VPS39Q96JC1 886 aa14.17□□□□□ -0.14
SSR4-208ENST00000471880 PLCD4Q9BRC7 762 aa14.17□□□□□ -0.14
SSR4-208ENST00000471880 CUEDC1Q9NWM3 386 aaPredicted RBP14.17□□□□□ -0.14
SSR4-208ENST00000471880 NBASA2RRP1 2371 aa14.17□□□□□ -0.14
SSR4-208ENST00000471880 BSNQ9UPA5 3926 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 OR2A25A4D2G3 310 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 A6NL46 340 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 H0YGG7 62 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 H3BMH7 237 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 H7BY64 318 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 PYCARD-AS1I3L0S3 204 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 CAPN1P07384 714 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 NR1D1P20393 614 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 OR1D4P47884 311 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 ARF3P61204 181 aaPredicted RBP14.16□□□□□ -0.14
SSR4-208ENST00000471880 ABATP80404 500 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 PRDX1Q06830 199 aaKnown RBP14.16□□□□□ -0.14
SSR4-208ENST00000471880 TRADDQ15628 312 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 PHKG1Q16816 387 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 WHAMMP3Q1A5X7 153 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 LACTB2Q53H82 288 aaPredicted RBP14.16□□□□□ -0.14
SSR4-208ENST00000471880 COLEC12Q5KU26 742 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 ZNF385CQ66K41 422 aaPredicted RBP14.16□□□□□ -0.14
SSR4-208ENST00000471880 SHISA6Q6ZSJ9 500 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 C3orf62Q6ZUJ4 267 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 FRA10AC1Q70Z53 315 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 RNF44Q7L0R7 432 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 ZC3HC1Q86WB0 502 aaKnown RBP14.16□□□□□ -0.14
SSR4-208ENST00000471880 PRSS58Q8IYP2 241 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 DTWD1Q8N5C7 304 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 CSNK1A1LQ8N752 337 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 FBXO25Q8TCJ0 367 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.16□□□□□ -0.14
SSR4-208ENST00000471880 MRRFQ96E11 262 aaKnown RBP14.16□□□□□ -0.14
SSR4-208ENST00000471880 PRAP1Q96NZ9 151 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 EGFL8Q99944 293 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 LRRC1Q9BTT6 524 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 DHRS4Q9BTZ2 278 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 MOCS1Q9NZB8 636 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 ANKMY1Q9P2S6 941 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 TLK1Q9UKI8 766 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 TP53TG5Q9Y2B4 290 aa14.16□□□□□ -0.14
SSR4-208ENST00000471880 NPEPPSL1A6NEC2 478 aa14.15□□□□□ -0.14
SSR4-208ENST00000471880 PEX12O00623 359 aa14.15□□□□□ -0.14
SSR4-208ENST00000471880 HAT1O14929 419 aa14.15□□□□□ -0.14
SSR4-208ENST00000471880 SLC16A5O15375 505 aa14.15□□□□□ -0.14
SSR4-208ENST00000471880 RECKO95980 971 aa14.15□□□□□ -0.14
SSR4-208ENST00000471880 CD63P08962 238 aa14.15□□□□□ -0.14
SSR4-208ENST00000471880 EZRP15311 586 aaKnown RBP14.15□□□□□ -0.14
SSR4-208ENST00000471880 MAGEA4P43358 317 aa14.15□□□□□ -0.14
SSR4-208ENST00000471880 PMS2P54278 862 aa14.15□□□□□ -0.14
SSR4-208ENST00000471880 GUCY2DQ02846 1103 aa14.15□□□□□ -0.14
SSR4-208ENST00000471880 ATP1A4Q13733 1029 aa14.15□□□□□ -0.14
SSR4-208ENST00000471880 FRG1Q14331 258 aaKnown RBP14.15□□□□□ -0.14
SSR4-208ENST00000471880 YOD1Q5VVQ6 348 aaPredicted RBP14.15□□□□□ -0.14
SSR4-208ENST00000471880 FBXO42Q6P3S6 717 aa14.15□□□□□ -0.14
SSR4-208ENST00000471880 PAQR7Q86WK9 346 aa14.15□□□□□ -0.14
SSR4-208ENST00000471880 C17orf64Q86WR6 236 aa14.15□□□□□ -0.14
SSR4-208ENST00000471880 NKAPQ8N5F7 415 aaKnown RBP14.15□□□□□ -0.14
SSR4-208ENST00000471880 PPM1NQ8N819 430 aa14.15□□□□□ -0.14
SSR4-208ENST00000471880 PYCR2Q96C36 320 aa14.15□□□□□ -0.14
SSR4-208ENST00000471880 TRIM55Q9BYV6 548 aa14.15□□□□□ -0.14
SSR4-208ENST00000471880 TRIM4Q9C037 500 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms