RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 SEMA3AQ14563 771 aa13.21□□□□□ -0.29
SEMA3F-208ENST00000470737 MEI1Q5TIA1 1274 aa13.21□□□□□ -0.29
SEMA3F-208ENST00000470737 TMEM207Q6UWW9 146 aa13.21□□□□□ -0.29
SEMA3F-208ENST00000470737 RIPOR1Q6ZS17 1223 aa13.21□□□□□ -0.29
SEMA3F-208ENST00000470737 GDF7Q7Z4P5 450 aa13.21□□□□□ -0.29
SEMA3F-208ENST00000470737 LDB1Q86U70 411 aaPredicted RBP13.21□□□□□ -0.29
SEMA3F-208ENST00000470737 LRRC6Q86X45 466 aa13.21□□□□□ -0.29
SEMA3F-208ENST00000470737 OR4N4Q8N0Y3 316 aa13.21□□□□□ -0.29
SEMA3F-208ENST00000470737 HMGCLL1Q8TB92 370 aa13.21□□□□□ -0.29
SEMA3F-208ENST00000470737 HAS2Q92819 552 aa13.21□□□□□ -0.29
SEMA3F-208ENST00000470737 MVB12AQ96EY5 273 aa13.21□□□□□ -0.29
SEMA3F-208ENST00000470737 ZNF778Q96MU6 729 aa13.21□□□□□ -0.29
SEMA3F-208ENST00000470737 UTP6Q9NYH9 597 aaKnown RBP13.21□□□□□ -0.29
SEMA3F-208ENST00000470737 PACSIN2Q9UNF0 486 aaPredicted RBP13.21□□□□□ -0.29
SEMA3F-208ENST00000470737 PPP2R2CQ9Y2T4 447 aa13.21□□□□□ -0.29
SEMA3F-208ENST00000470737 KLK4Q9Y5K2 254 aa13.21□□□□□ -0.29
SEMA3F-208ENST00000470737 NFS1Q9Y697 457 aa13.21□□□□□ -0.29
SEMA3F-208ENST00000470737 CPAMD8Q8IZJ3 1885 aa13.21□□□□□ -0.3
SEMA3F-208ENST00000470737 IGLV3-12A0A075B6K2 115 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 IDSB3KWA1 339 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 PHF2O75151 1096 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 RASAL1O95294 804 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 MED26O95402 600 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 FTCDO95954 541 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 ICAM2P13598 275 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 EMP3P54852 163 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 CASP6P55212 293 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 EIF3BP55884 814 aaKnown RBP13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 TSTA3Q13630 321 aaPredicted RBP13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 DSG2Q14126 1118 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 ZXDCQ2QGD7 858 aaPredicted RBP13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 PCID2Q5JVF3 399 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 SEL1L2Q5TEA6 688 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 ABHD17BQ5VST6 288 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 ZNF324BQ6AW86 544 aaPredicted RBP13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 FAAH2Q6GMR7 532 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 CCDC89Q8N998 374 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 OR2A1Q8NGT9 310 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 DNAJB8Q8NHS0 232 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 ATG4AQ8WYN0 398 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 C10orf90Q96M02 699 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 TAAR6Q96RI8 345 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 MESP1Q9BRJ9 268 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 DPH7Q9BTV6 452 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 ACAT2Q9BWD1 397 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 FRMD8P1Q9BZ68 369 aaPredicted RBP13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 MRPS30Q9NP92 439 aaKnown RBP13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 CHST11Q9NPF2 352 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 MKKSQ9NPJ1 570 aaPredicted RBP13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 RAB6BQ9NRW1 208 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 STOX2Q9P2F5 926 aaPredicted RBP13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 SEC14L3Q9UDX4 400 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 TEKT2Q9UIF3 430 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 ZNF148Q9UQR1 794 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 HEATR5BQ9P2D3 2071 aa13.2□□□□□ -0.3
SEMA3F-208ENST00000470737 IGHV1-45A0A0A0MS14 117 aa13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 OR2A25A4D2G3 310 aa13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 H0YGG7 62 aa13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 CCL21O00585 134 aa13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 PFDN6O15212 129 aa13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 UNC5CO95185 931 aa13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 F10P00742 488 aa13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 APRTP07741 180 aa13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 RPS3P23396 243 aaKnown RBP eCLIP13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 RPA3P35244 121 aaPredicted RBP13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 PTGER4P35408 488 aa13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 GRIA1P42261 906 aa13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 ARF3P61204 181 aaPredicted RBP13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 LONRF1Q17RB8 773 aa13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 CCSMST1Q4G0I0 132 aa13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 HIBCHQ6NVY1 386 aaPredicted RBP13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 RPTNQ6XPR3 784 aa13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 MRGPRGQ86SM5 289 aa13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 LAPTM4BQ86VI4 370 aa13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 MPP5Q8N3R9 675 aa13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 ZNF808Q8N4W9 903 aaPredicted RBP13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 CSNK1A1LQ8N752 337 aa13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 ITLN2Q8WWU7 325 aaPredicted RBP13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 PSMF1Q92530 271 aa13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 RERGQ96A58 199 aaPredicted RBP13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 MMABQ96EY8 250 aaPredicted RBP13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 ABI3Q9P2A4 366 aa13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 MARCH4Q9P2E8 410 aaPredicted RBP13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 SH3BGRL2Q9UJC5 107 aa13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 TSR3Q9UJK0 312 aaKnown RBP13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 RUVBL2Q9Y230 463 aaKnown RBP13.19□□□□□ -0.3
SEMA3F-208ENST00000470737 PKDREJQ9NTG1 2253 aa13.18□□□□□ -0.3
SEMA3F-208ENST00000470737 A0A1W2PQ72 361 aa13.18□□□□□ -0.3
SEMA3F-208ENST00000470737 TCRBV7S2A1N4TA0A589 114 aa13.18□□□□□ -0.3
SEMA3F-208ENST00000470737 ZNF839A8K0R7 811 aa13.18□□□□□ -0.3
SEMA3F-208ENST00000470737 TXNDC9O14530 226 aa13.18□□□□□ -0.3
SEMA3F-208ENST00000470737 FFAR3O14843 346 aa13.18□□□□□ -0.3
SEMA3F-208ENST00000470737 GPR42O15529 346 aa13.18□□□□□ -0.3
SEMA3F-208ENST00000470737 NRP2O60462 931 aa13.18□□□□□ -0.3
SEMA3F-208ENST00000470737 CCNDBP1O95273 360 aa13.18□□□□□ -0.3
SEMA3F-208ENST00000470737 WDPCPO95876 746 aa13.18□□□□□ -0.3
SEMA3F-208ENST00000470737 PKMP14618 531 aaKnown RBP13.18□□□□□ -0.3
SEMA3F-208ENST00000470737 COX6B1P14854 86 aa13.18□□□□□ -0.3
SEMA3F-208ENST00000470737 HTR1EP28566 365 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms